RNA–Protein interactions for RNA: ENST00000570270.1

TAF1C-223, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, humanhuman

TSL 3

Gene TAF1C, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TAF1C-223ENST00000570270 NISCHQ9Y2I1 1504 aa33.47■■■□□ 2.95
TAF1C-223ENST00000570270 CCDC180Q9P1Z9 1646 aa29.89■■■□□ 2.38
TAF1C-223ENST00000570270 ABCC9O60706 1549 aa29.46■■■□□ 2.31
TAF1C-223ENST00000570270 RB1CC1Q8TDY2 1594 aa28.31■■■□□ 2.12
TAF1C-223ENST00000570270 NACADO15069 1562 aa28.22■■■□□ 2.11
TAF1C-223ENST00000570270 DCAF8L2P0C7V8 631 aa28.17■■■□□ 2.1
TAF1C-223ENST00000570270 MYO15BQ96JP2 1530 aa27.97■■■□□ 2.07
TAF1C-223ENST00000570270 ZCCHC6Q5VYS8 1495 aaKnown RBP27.8■■■□□ 2.04
TAF1C-223ENST00000570270 DCAF1Q9Y4B6 1507 aa27.73■■■□□ 2.03
TAF1C-223ENST00000570270 UNC13AQ9UPW8 1703 aa27.5■■□□□ 1.99
TAF1C-223ENST00000570270 PABPN1Q86U42 306 aaKnown RBP eCLIP27.5■■□□□ 1.99
TAF1C-223ENST00000570270 BICRAQ9NZM4 1560 aa27.31■■□□□ 1.96
TAF1C-223ENST00000570270 DNAJC5BQ9UF47 199 aa27.22■■□□□ 1.95
TAF1C-223ENST00000570270 SHROOM4Q9ULL8 1493 aa27.21■■□□□ 1.95
TAF1C-223ENST00000570270 SCRIBQ14160 1630 aa27.18■■□□□ 1.94
TAF1C-223ENST00000570270 EIF4G1Q04637 1599 aaKnown RBP26.69■■□□□ 1.86
TAF1C-223ENST00000570270 CC2D2AQ9P2K1 1620 aa26.64■■□□□ 1.85
TAF1C-223ENST00000570270 CECR2Q9BXF3 1484 aa26.55■■□□□ 1.84
TAF1C-223ENST00000570270 NCAPD3P42695 1498 aa26.02■■□□□ 1.76
TAF1C-223ENST00000570270 SMARCA4P51532 1647 aa26■■□□□ 1.75
TAF1C-223ENST00000570270 BAZ1AQ9NRL2 1556 aaPredicted RBP26■■□□□ 1.75
TAF1C-223ENST00000570270 SMARCA2P51531 1590 aa25.98■■□□□ 1.75
TAF1C-223ENST00000570270 ATAD2BQ9ULI0 1458 aa25.96■■□□□ 1.75
TAF1C-223ENST00000570270 HMGXB3Q12766 1538 aa25.85■■□□□ 1.73
TAF1C-223ENST00000570270 PEG3Q9GZU2 1588 aa25.78■■□□□ 1.72
TAF1C-223ENST00000570270 BAZ1BQ9UIG0 1483 aaKnown RBP25.77■■□□□ 1.72
TAF1C-223ENST00000570270 MROH2BQ7Z745 1585 aa25.73■■□□□ 1.71
TAF1C-223ENST00000570270 ERCC6Q03468 1493 aa25.52■■□□□ 1.68
TAF1C-223ENST00000570270 WIZO95785 1651 aa25.42■■□□□ 1.66
TAF1C-223ENST00000570270 LAMC3Q9Y6N6 1575 aa25.39■■□□□ 1.65
TAF1C-223ENST00000570270 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
TAF1C-223ENST00000570270 NESP48681 1621 aa25.36■■□□□ 1.65
TAF1C-223ENST00000570270 CUX2O14529 1486 aa25.35■■□□□ 1.65
TAF1C-223ENST00000570270 PDS5BQ9NTI5 1447 aa25.29■■□□□ 1.64
TAF1C-223ENST00000570270 CADPSQ9ULU8 1353 aa25.27■■□□□ 1.64
TAF1C-223ENST00000570270 TOP2AP11388 1531 aaKnown RBP25.21■■□□□ 1.63
TAF1C-223ENST00000570270 KIF21AQ7Z4S6 1674 aa25.07■■□□□ 1.6
TAF1C-223ENST00000570270 THOC2Q8NI27 1593 aaKnown RBP25.05■■□□□ 1.6
TAF1C-223ENST00000570270 CFTRP13569 1480 aa25.02■■□□□ 1.6
TAF1C-223ENST00000570270 MRC2Q9UBG0 1479 aa24.96■■□□□ 1.59
TAF1C-223ENST00000570270 CEP164Q9UPV0 1460 aa24.96■■□□□ 1.59
TAF1C-223ENST00000570270 FANCD2Q9BXW9 1451 aa24.94■■□□□ 1.58
TAF1C-223ENST00000570270 CCDC88BA6NC98 1476 aa24.9■■□□□ 1.58
TAF1C-223ENST00000570270 DNAJC5Q9H3Z4 198 aa24.88■■□□□ 1.57
TAF1C-223ENST00000570270 WDR62O43379 1518 aa24.86■■□□□ 1.57
TAF1C-223ENST00000570270 PRDM2Q13029 1718 aa24.78■■□□□ 1.56
TAF1C-223ENST00000570270 URB2Q14146 1524 aaKnown RBP24.64■■□□□ 1.53
TAF1C-223ENST00000570270 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
TAF1C-223ENST00000570270 SUPT5HO00267 1087 aaKnown RBP24.59■■□□□ 1.53
TAF1C-223ENST00000570270 TOPBP1Q92547 1522 aa24.49■■□□□ 1.51
TAF1C-223ENST00000570270 IFT140Q96RY7 1462 aa24.47■■□□□ 1.51
TAF1C-223ENST00000570270 DNMBPQ6XZF7 1577 aa24.46■■□□□ 1.51
TAF1C-223ENST00000570270 OSCARQ8IYS5 282 aa24.31■■□□□ 1.48
TAF1C-223ENST00000570270 ZNF608Q9ULD9 1512 aaPredicted RBP24.26■■□□□ 1.47
TAF1C-223ENST00000570270 POLA1P09884 1462 aaPredicted RBP24.26■■□□□ 1.47
TAF1C-223ENST00000570270 SOGA1O94964 1423 aa24.22■■□□□ 1.47
TAF1C-223ENST00000570270 TARBP1Q13395 1621 aaKnown RBP24.2■■□□□ 1.46
TAF1C-223ENST00000570270 EIF4G3O43432 1585 aaKnown RBP24.17■■□□□ 1.46
TAF1C-223ENST00000570270 FGD5Q6ZNL6 1462 aa24.16■■□□□ 1.46
TAF1C-223ENST00000570270 CUX1P39880 1505 aa24.15■■□□□ 1.46
TAF1C-223ENST00000570270 AQRO60306 1485 aaKnown RBP eCLIP24.13■■□□□ 1.452e-7■■□□□ 13
TAF1C-223ENST00000570270 WDR97A6NE52 1622 aa24.13■■□□□ 1.45
TAF1C-223ENST00000570270 RAD54L2Q9Y4B4 1467 aa24.13■■□□□ 1.45
TAF1C-223ENST00000570270 TDRD9Q8NDG6 1382 aaKnown RBP24.06■■□□□ 1.44
TAF1C-223ENST00000570270 FBLN2P98095 1184 aa24.01■■□□□ 1.43
TAF1C-223ENST00000570270 WRNQ14191 1432 aaPredicted RBP eCLIP23.99■■□□□ 1.43
TAF1C-223ENST00000570270 GRIN2BQ13224 1484 aa23.97■■□□□ 1.43
TAF1C-223ENST00000570270 ABCA10Q8WWZ4 1543 aa23.94■■□□□ 1.42
TAF1C-223ENST00000570270 MAGI1Q96QZ7 1491 aaPredicted RBP23.94■■□□□ 1.42
TAF1C-223ENST00000570270 TOP2BQ02880 1626 aa23.93■■□□□ 1.42
TAF1C-223ENST00000570270 CHMP7Q8WUX9 453 aaPredicted RBP23.93■■□□□ 1.42
TAF1C-223ENST00000570270 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
TAF1C-223ENST00000570270 GAPVD1Q14C86 1478 aa23.92■■□□□ 1.42
TAF1C-223ENST00000570270 SNAPC4Q5SXM2 1469 aa23.91■■□□□ 1.42
TAF1C-223ENST00000570270 BIVM-ERCC5R4GMW8 1640 aa23.91■■□□□ 1.42
TAF1C-223ENST00000570270 CHD1O14646 1710 aa23.9■■□□□ 1.42
TAF1C-223ENST00000570270 SYNJ1O43426 1573 aa23.83■■□□□ 1.41
TAF1C-223ENST00000570270 SYNJ2O15056 1496 aa23.83■■□□□ 1.41
TAF1C-223ENST00000570270 ABCA5Q8WWZ7 1642 aa23.81■■□□□ 1.4
TAF1C-223ENST00000570270 PBRM1Q86U86 1689 aa23.81■■□□□ 1.4
TAF1C-223ENST00000570270 RIMBP3CA6NJZ7 1639 aa23.79■■□□□ 1.4
TAF1C-223ENST00000570270 RIMBP3BA6NNM3 1639 aa23.79■■□□□ 1.4
TAF1C-223ENST00000570270 RIMBP3Q9UFD9 1639 aa23.79■■□□□ 1.4
TAF1C-223ENST00000570270 ARHGEF11O15085 1522 aa23.79■■□□□ 1.4
TAF1C-223ENST00000570270 ERICH3Q5RHP9 1530 aa23.69■■□□□ 1.38
TAF1C-223ENST00000570270 CLASP1Q7Z460 1538 aa23.66■■□□□ 1.38
TAF1C-223ENST00000570270 FHAD1B1AJZ9 1412 aa23.66■■□□□ 1.38
TAF1C-223ENST00000570270 CYB5RLQ6IPT4 315 aa23.65■■□□□ 1.38
TAF1C-223ENST00000570270 GRIN2AQ12879 1464 aa23.62■■□□□ 1.37
TAF1C-223ENST00000570270 ADAMTS12P58397 1594 aa23.61■■□□□ 1.37
TAF1C-223ENST00000570270 KIF27Q86VH2 1401 aa23.57■■□□□ 1.36
TAF1C-223ENST00000570270 ARAP1Q96P48 1450 aa23.55■■□□□ 1.36
TAF1C-223ENST00000570270 NUP160Q12769 1436 aa23.52■■□□□ 1.36
TAF1C-223ENST00000570270 CEP170Q5SW79 1584 aa23.44■■□□□ 1.34
TAF1C-223ENST00000570270 IGF1RP08069 1367 aa23.44■■□□□ 1.34
TAF1C-223ENST00000570270 CUL7Q14999 1698 aa23.41■■□□□ 1.34
TAF1C-223ENST00000570270 JPH4Q96JJ6 628 aa23.36■■□□□ 1.33
TAF1C-223ENST00000570270 CARMIL1Q5VZK9 1371 aa23.34■■□□□ 1.33
TAF1C-223ENST00000570270 SHROOM2Q13796 1616 aa23.33■■□□□ 1.33
TAF1C-223ENST00000570270 TRHP20396 242 aaPredicted RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms