RNA–Protein interactions for RNA: ENST00000570149.1

RPL13-215, Transcript of ribosomal protein L13, humanhuman

TSL 2

Gene RPL13, Length 435 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13-215ENST00000570149 NISCHQ9Y2I1 1504 aa31.59■■■□□ 2.65
RPL13-215ENST00000570149 ABCC9O60706 1549 aa30.17■■■□□ 2.42
RPL13-215ENST00000570149 DNAJC5BQ9UF47 199 aa29.46■■■□□ 2.31
RPL13-215ENST00000570149 CCDC180Q9P1Z9 1646 aa28.97■■■□□ 2.23
RPL13-215ENST00000570149 RB1CC1Q8TDY2 1594 aa28.19■■■□□ 2.1
RPL13-215ENST00000570149 DNAJC5Q9H3Z4 198 aa28.05■■■□□ 2.08
RPL13-215ENST00000570149 PABPN1Q86U42 306 aaKnown RBP eCLIP27.89■■■□□ 2.06
RPL13-215ENST00000570149 NACADO15069 1562 aa27.68■■■□□ 2.02
RPL13-215ENST00000570149 UNC13AQ9UPW8 1703 aa27.61■■■□□ 2.01
RPL13-215ENST00000570149 BICRAQ9NZM4 1560 aa27.38■■□□□ 1.97
RPL13-215ENST00000570149 CECR2Q9BXF3 1484 aa27.32■■□□□ 1.96
RPL13-215ENST00000570149 DCAF8L2P0C7V8 631 aa27.28■■□□□ 1.96
RPL13-215ENST00000570149 CC2D2AQ9P2K1 1620 aa27.22■■□□□ 1.95
RPL13-215ENST00000570149 SHROOM4Q9ULL8 1493 aa26.88■■□□□ 1.89
RPL13-215ENST00000570149 MYO15BQ96JP2 1530 aa26.85■■□□□ 1.89
RPL13-215ENST00000570149 EIF4G1Q04637 1599 aaKnown RBP26.83■■□□□ 1.89
RPL13-215ENST00000570149 CUX2O14529 1486 aa26.55■■□□□ 1.84
RPL13-215ENST00000570149 TRIM41Q8WV44 630 aa26.26■■□□□ 1.79
RPL13-215ENST00000570149 SCRIBQ14160 1630 aa26.25■■□□□ 1.79
RPL13-215ENST00000570149 ERCC6Q03468 1493 aa26.16■■□□□ 1.78
RPL13-215ENST00000570149 DCAF1Q9Y4B6 1507 aa26.03■■□□□ 1.76
RPL13-215ENST00000570149 ZCCHC6Q5VYS8 1495 aaKnown RBP25.87■■□□□ 1.73
RPL13-215ENST00000570149 THOC2Q8NI27 1593 aaKnown RBP25.55■■□□□ 1.68
RPL13-215ENST00000570149 NCAPD3P42695 1498 aa25.54■■□□□ 1.68
RPL13-215ENST00000570149 NESP48681 1621 aa25.54■■□□□ 1.68
RPL13-215ENST00000570149 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
RPL13-215ENST00000570149 ATAD2BQ9ULI0 1458 aa25.27■■□□□ 1.64
RPL13-215ENST00000570149 KIF21AQ7Z4S6 1674 aa25.23■■□□□ 1.63
RPL13-215ENST00000570149 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
RPL13-215ENST00000570149 LAMC3Q9Y6N6 1575 aa25.21■■□□□ 1.63
RPL13-215ENST00000570149 OSCARQ8IYS5 282 aa25.18■■□□□ 1.62
RPL13-215ENST00000570149 BAZ1AQ9NRL2 1556 aaPredicted RBP25.17■■□□□ 1.62
RPL13-215ENST00000570149 AEBP2Q6ZN18 517 aaPredicted RBP25.09■■□□□ 1.61
RPL13-215ENST00000570149 PDS5BQ9NTI5 1447 aa25.09■■□□□ 1.61
RPL13-215ENST00000570149 RIMBP3CA6NJZ7 1639 aa24.97■■□□□ 1.59
RPL13-215ENST00000570149 RIMBP3BA6NNM3 1639 aa24.97■■□□□ 1.59
RPL13-215ENST00000570149 RIMBP3Q9UFD9 1639 aa24.97■■□□□ 1.59
RPL13-215ENST00000570149 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
RPL13-215ENST00000570149 SMARCA4P51532 1647 aa24.94■■□□□ 1.58
RPL13-215ENST00000570149 MRC2Q9UBG0 1479 aa24.92■■□□□ 1.58
RPL13-215ENST00000570149 WDR62O43379 1518 aa24.91■■□□□ 1.58
RPL13-215ENST00000570149 TRHP20396 242 aaPredicted RBP24.82■■□□□ 1.56
RPL13-215ENST00000570149 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
RPL13-215ENST00000570149 PEG3Q9GZU2 1588 aa24.71■■□□□ 1.55
RPL13-215ENST00000570149 CADPSQ9ULU8 1353 aa24.7■■□□□ 1.55
RPL13-215ENST00000570149 CYB5RLQ6IPT4 315 aa24.65■■□□□ 1.54
RPL13-215ENST00000570149 CEP164Q9UPV0 1460 aa24.57■■□□□ 1.52
RPL13-215ENST00000570149 FANCD2Q9BXW9 1451 aa24.42■■□□□ 1.5
RPL13-215ENST00000570149 ARAP1Q96P48 1450 aa24.36■■□□□ 1.49
RPL13-215ENST00000570149 MROH2BQ7Z745 1585 aa24.31■■□□□ 1.48
RPL13-215ENST00000570149 URB2Q14146 1524 aaKnown RBP24.29■■□□□ 1.48
RPL13-215ENST00000570149 ZNF608Q9ULD9 1512 aaPredicted RBP24.2■■□□□ 1.46
RPL13-215ENST00000570149 ILDR1Q86SU0 546 aaPredicted RBP24.19■■□□□ 1.46
RPL13-215ENST00000570149 RSF1Q96T23 1441 aaPredicted RBP24.16■■□□□ 1.46
RPL13-215ENST00000570149 CHD1O14646 1710 aa24.15■■□□□ 1.46
RPL13-215ENST00000570149 CFTRP13569 1480 aa24.14■■□□□ 1.46
RPL13-215ENST00000570149 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
RPL13-215ENST00000570149 EIF4G3O43432 1585 aaKnown RBP24.02■■□□□ 1.44
RPL13-215ENST00000570149 WIZO95785 1651 aa24.01■■□□□ 1.43
RPL13-215ENST00000570149 FBLN2P98095 1184 aa23.97■■□□□ 1.43
RPL13-215ENST00000570149 PRDM2Q13029 1718 aa23.9■■□□□ 1.42
RPL13-215ENST00000570149 AQRO60306 1485 aaKnown RBP eCLIP23.83■■□□□ 1.413e-13■■■■□ 25.4
RPL13-215ENST00000570149 TOPBP1Q92547 1522 aa23.81■■□□□ 1.4
RPL13-215ENST00000570149 CLASP1Q7Z460 1538 aa23.77■■□□□ 1.4
RPL13-215ENST00000570149 ABCC8Q09428 1581 aa23.74■■□□□ 1.39
RPL13-215ENST00000570149 TARBP1Q13395 1621 aaKnown RBP23.72■■□□□ 1.39
RPL13-215ENST00000570149 SYNJ1O43426 1573 aa23.68■■□□□ 1.38
RPL13-215ENST00000570149 GAPVD1Q14C86 1478 aa23.63■■□□□ 1.37
RPL13-215ENST00000570149 DNMBPQ6XZF7 1577 aa23.61■■□□□ 1.37
RPL13-215ENST00000570149 CHMP7Q8WUX9 453 aaPredicted RBP23.6■■□□□ 1.37
RPL13-215ENST00000570149 TOP2AP11388 1531 aaKnown RBP23.57■■□□□ 1.36
RPL13-215ENST00000570149 KDM4FA0A1W2PPD8 638 aa23.56■■□□□ 1.36
RPL13-215ENST00000570149 KIF13AQ9H1H9 1805 aa23.54■■□□□ 1.36
RPL13-215ENST00000570149 SNAPC4Q5SXM2 1469 aa23.53■■□□□ 1.36
RPL13-215ENST00000570149 TDRD9Q8NDG6 1382 aaKnown RBP23.48■■□□□ 1.35
RPL13-215ENST00000570149 POLA1P09884 1462 aaPredicted RBP23.47■■□□□ 1.35
RPL13-215ENST00000570149 MAGI1Q96QZ7 1491 aaPredicted RBP23.45■■□□□ 1.34
RPL13-215ENST00000570149 RAD54L2Q9Y4B4 1467 aa23.42■■□□□ 1.34
RPL13-215ENST00000570149 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
RPL13-215ENST00000570149 SYNJ2O15056 1496 aa23.38■■□□□ 1.33
RPL13-215ENST00000570149 SOGA1O94964 1423 aa23.38■■□□□ 1.33
RPL13-215ENST00000570149 CCDC88BA6NC98 1476 aa23.33■■□□□ 1.33
RPL13-215ENST00000570149 GRIN2BQ13224 1484 aa23.31■■□□□ 1.32
RPL13-215ENST00000570149 ERCC6L2Q5T890 1561 aa23.3■■□□□ 1.32
RPL13-215ENST00000570149 KDM6BO15054 1643 aa23.23■■□□□ 1.31
RPL13-215ENST00000570149 FAM69CQ0P6D2 419 aa23.23■■□□□ 1.31
RPL13-215ENST00000570149 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
RPL13-215ENST00000570149 FBXO41Q8TF61 875 aa23.18■■□□□ 1.3
RPL13-215ENST00000570149 ABCC10Q5T3U5 1492 aa23.17■■□□□ 1.3
RPL13-215ENST00000570149 CEP170Q5SW79 1584 aa23.15■■□□□ 1.3
RPL13-215ENST00000570149 HECW2Q9P2P5 1572 aa23.15■■□□□ 1.3
RPL13-215ENST00000570149 FGD5Q6ZNL6 1462 aa23.15■■□□□ 1.3
RPL13-215ENST00000570149 TSPOAP1O95153 1857 aa23.08■■□□□ 1.29
RPL13-215ENST00000570149 DIP2BQ9P265 1576 aa23.06■■□□□ 1.28
RPL13-215ENST00000570149 SHROOM2Q13796 1616 aa23.05■■□□□ 1.28
RPL13-215ENST00000570149 ADGRL1O94910 1474 aa23.05■■□□□ 1.28
RPL13-215ENST00000570149 NPM1P06748 294 aaKnown RBP eCLIP23.03■■□□□ 1.28
RPL13-215ENST00000570149 MAPKBP1O60336 1514 aa23.01■■□□□ 1.27
RPL13-215ENST00000570149 GRIN2AQ12879 1464 aa23■■□□□ 1.27
RPL13-215ENST00000570149 NUP160Q12769 1436 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms