RNA–Protein interactions for RNA: ENST00000570134.5

PMM2-218, Transcript of phosphomannomutase 2, humanhuman

TSL 5

Gene PMM2, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM2-218ENST00000570134 NISCHQ9Y2I1 1504 aa29.2■■■□□ 2.27
PMM2-218ENST00000570134 CCDC180Q9P1Z9 1646 aa26.31■■□□□ 1.8
PMM2-218ENST00000570134 ABCC9O60706 1549 aa26.17■■□□□ 1.78
PMM2-218ENST00000570134 RB1CC1Q8TDY2 1594 aa24.97■■□□□ 1.59
PMM2-218ENST00000570134 NACADO15069 1562 aa24.8■■□□□ 1.56
PMM2-218ENST00000570134 UNC13AQ9UPW8 1703 aa24.5■■□□□ 1.51
PMM2-218ENST00000570134 DCAF8L2P0C7V8 631 aa24.5■■□□□ 1.51
PMM2-218ENST00000570134 MYO15BQ96JP2 1530 aa24.45■■□□□ 1.51
PMM2-218ENST00000570134 DNAJC5BQ9UF47 199 aa24.45■■□□□ 1.5
PMM2-218ENST00000570134 PABPN1Q86U42 306 aaKnown RBP eCLIP24.29■■□□□ 1.48
PMM2-218ENST00000570134 BICRAQ9NZM4 1560 aa24.25■■□□□ 1.47
PMM2-218ENST00000570134 ZCCHC6Q5VYS8 1495 aaKnown RBP24.24■■□□□ 1.47
PMM2-218ENST00000570134 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
PMM2-218ENST00000570134 SHROOM4Q9ULL8 1493 aa23.94■■□□□ 1.42
PMM2-218ENST00000570134 SCRIBQ14160 1630 aa23.92■■□□□ 1.42
PMM2-218ENST00000570134 CC2D2AQ9P2K1 1620 aa23.7■■□□□ 1.38
PMM2-218ENST00000570134 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
PMM2-218ENST00000570134 CECR2Q9BXF3 1484 aa23.58■■□□□ 1.37
PMM2-218ENST00000570134 NCAPD3P42695 1498 aa22.84■■□□□ 1.25
PMM2-218ENST00000570134 SMARCA4P51532 1647 aa22.83■■□□□ 1.25
PMM2-218ENST00000570134 ATAD2BQ9ULI0 1458 aa22.79■■□□□ 1.24
PMM2-218ENST00000570134 SMARCA2P51531 1590 aa22.76■■□□□ 1.23
PMM2-218ENST00000570134 HMGXB3Q12766 1538 aa22.75■■□□□ 1.23
PMM2-218ENST00000570134 BAZ1AQ9NRL2 1556 aaPredicted RBP22.7■■□□□ 1.22
PMM2-218ENST00000570134 PEG3Q9GZU2 1588 aa22.61■■□□□ 1.21
PMM2-218ENST00000570134 ERCC6Q03468 1493 aa22.6■■□□□ 1.21
PMM2-218ENST00000570134 CUX2O14529 1486 aa22.59■■□□□ 1.21
PMM2-218ENST00000570134 BAZ1BQ9UIG0 1483 aaKnown RBP22.59■■□□□ 1.21
PMM2-218ENST00000570134 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
PMM2-218ENST00000570134 NESP48681 1621 aa22.49■■□□□ 1.19
PMM2-218ENST00000570134 DNAJC5Q9H3Z4 198 aa22.45■■□□□ 1.18
PMM2-218ENST00000570134 LAMC3Q9Y6N6 1575 aa22.39■■□□□ 1.18
PMM2-218ENST00000570134 THOC2Q8NI27 1593 aaKnown RBP22.35■■□□□ 1.17
PMM2-218ENST00000570134 KIF21AQ7Z4S6 1674 aa22.3■■□□□ 1.16
PMM2-218ENST00000570134 WIZO95785 1651 aa22.27■■□□□ 1.16
PMM2-218ENST00000570134 PDS5BQ9NTI5 1447 aa22.19■■□□□ 1.14
PMM2-218ENST00000570134 CADPSQ9ULU8 1353 aa22.12■■□□□ 1.13
PMM2-218ENST00000570134 MRC2Q9UBG0 1479 aa22.04■■□□□ 1.12
PMM2-218ENST00000570134 WDR62O43379 1518 aa22.01■■□□□ 1.11
PMM2-218ENST00000570134 RSF1Q96T23 1441 aaPredicted RBP22■■□□□ 1.11
PMM2-218ENST00000570134 TOP2AP11388 1531 aaKnown RBP22■■□□□ 1.11
PMM2-218ENST00000570134 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
PMM2-218ENST00000570134 CFTRP13569 1480 aa21.91■■□□□ 1.1
PMM2-218ENST00000570134 FANCD2Q9BXW9 1451 aa21.91■■□□□ 1.1
PMM2-218ENST00000570134 PRDM2Q13029 1718 aa21.86■■□□□ 1.09
PMM2-218ENST00000570134 URB2Q14146 1524 aaKnown RBP21.75■■□□□ 1.07
PMM2-218ENST00000570134 CCDC88BA6NC98 1476 aa21.68■■□□□ 1.06
PMM2-218ENST00000570134 TOPBP1Q92547 1522 aa21.51■■□□□ 1.03
PMM2-218ENST00000570134 IFT140Q96RY7 1462 aa21.51■■□□□ 1.03
PMM2-218ENST00000570134 TRIM41Q8WV44 630 aa21.47■■□□□ 1.03
PMM2-218ENST00000570134 DNMBPQ6XZF7 1577 aa21.47■■□□□ 1.03
PMM2-218ENST00000570134 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
PMM2-218ENST00000570134 ABCC8Q09428 1581 aa21.45■■□□□ 1.02
PMM2-218ENST00000570134 OSCARQ8IYS5 282 aa21.44■■□□□ 1.02
PMM2-218ENST00000570134 EIF4G3O43432 1585 aaKnown RBP21.42■■□□□ 1.02
PMM2-218ENST00000570134 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
PMM2-218ENST00000570134 RIMBP3CA6NJZ7 1639 aa21.31■■□□□ 1
PMM2-218ENST00000570134 RIMBP3BA6NNM3 1639 aa21.31■■□□□ 1
PMM2-218ENST00000570134 RIMBP3Q9UFD9 1639 aa21.31■■□□□ 1
PMM2-218ENST00000570134 POLA1P09884 1462 aaPredicted RBP21.29■■□□□ 1
PMM2-218ENST00000570134 CHD1O14646 1710 aa21.29■■□□□ 1
PMM2-218ENST00000570134 AQRO60306 1485 aaKnown RBP eCLIP21.24■□□□□ 0.991e-8■■■□□ 18.7
PMM2-218ENST00000570134 ARHGEF11O15085 1522 aa21.21■□□□□ 0.99
PMM2-218ENST00000570134 RAD54L2Q9Y4B4 1467 aa21.18■□□□□ 0.98
PMM2-218ENST00000570134 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
PMM2-218ENST00000570134 FGD5Q6ZNL6 1462 aa21.16■□□□□ 0.98
PMM2-218ENST00000570134 CUX1P39880 1505 aa21.15■□□□□ 0.98
PMM2-218ENST00000570134 SOGA1O94964 1423 aa21.14■□□□□ 0.98
PMM2-218ENST00000570134 TDRD9Q8NDG6 1382 aaKnown RBP21.09■□□□□ 0.97
PMM2-218ENST00000570134 SNAPC4Q5SXM2 1469 aa21.07■□□□□ 0.96
PMM2-218ENST00000570134 FBLN2P98095 1184 aa21.04■□□□□ 0.96
PMM2-218ENST00000570134 PBRM1Q86U86 1689 aa21.03■□□□□ 0.96
PMM2-218ENST00000570134 MAGI1Q96QZ7 1491 aaPredicted RBP21.02■□□□□ 0.96
PMM2-218ENST00000570134 GRIN2BQ13224 1484 aa21■□□□□ 0.95
PMM2-218ENST00000570134 ARAP1Q96P48 1450 aa21■□□□□ 0.95
PMM2-218ENST00000570134 CLASP1Q7Z460 1538 aa20.99■□□□□ 0.95
PMM2-218ENST00000570134 SYNJ1O43426 1573 aa20.97■□□□□ 0.95
PMM2-218ENST00000570134 SUPT5HO00267 1087 aaKnown RBP20.96■□□□□ 0.95
PMM2-218ENST00000570134 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
PMM2-218ENST00000570134 CYB5RLQ6IPT4 315 aa20.94■□□□□ 0.94
PMM2-218ENST00000570134 SYNJ2O15056 1496 aa20.94■□□□□ 0.94
PMM2-218ENST00000570134 ABCA10Q8WWZ4 1543 aa20.93■□□□□ 0.94
PMM2-218ENST00000570134 GAPVD1Q14C86 1478 aa20.92■□□□□ 0.94
PMM2-218ENST00000570134 CHMP7Q8WUX9 453 aaPredicted RBP20.89■□□□□ 0.93
PMM2-218ENST00000570134 BIVM-ERCC5R4GMW8 1640 aa20.88■□□□□ 0.93
PMM2-218ENST00000570134 TOP2BQ02880 1626 aa20.85■□□□□ 0.93
PMM2-218ENST00000570134 WRNQ14191 1432 aaPredicted RBP eCLIP20.81■□□□□ 0.92
PMM2-218ENST00000570134 ADAMTS12P58397 1594 aa20.8■□□□□ 0.92
PMM2-218ENST00000570134 GRIN2AQ12879 1464 aa20.75■□□□□ 0.91
PMM2-218ENST00000570134 CEP170Q5SW79 1584 aa20.71■□□□□ 0.91
PMM2-218ENST00000570134 TRHP20396 242 aaPredicted RBP20.7■□□□□ 0.9
PMM2-218ENST00000570134 ERICH3Q5RHP9 1530 aa20.68■□□□□ 0.9
PMM2-218ENST00000570134 NUP160Q12769 1436 aa20.66■□□□□ 0.9
PMM2-218ENST00000570134 FHAD1B1AJZ9 1412 aa20.65■□□□□ 0.9
PMM2-218ENST00000570134 SHROOM2Q13796 1616 aa20.64■□□□□ 0.9
PMM2-218ENST00000570134 ERCC6L2Q5T890 1561 aa20.64■□□□□ 0.9
PMM2-218ENST00000570134 RUSC2Q8N2Y8 1516 aa20.51■□□□□ 0.87
PMM2-218ENST00000570134 PRG4Q92954 1404 aaPredicted RBP20.44■□□□□ 0.86
PMM2-218ENST00000570134 CUL7Q14999 1698 aa20.43■□□□□ 0.86
PMM2-218ENST00000570134 KIF27Q86VH2 1401 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms