RNA–Protein interactions for RNA: ENST00000570123.5

COX4I1-218, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 5

Gene COX4I1, Length 551 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-218ENST00000570123 NISCHQ9Y2I1 1504 aa32.93■■■□□ 2.86
COX4I1-218ENST00000570123 CCDC180Q9P1Z9 1646 aa29.41■■■□□ 2.3
COX4I1-218ENST00000570123 ABCC9O60706 1549 aa29.25■■■□□ 2.27
COX4I1-218ENST00000570123 RB1CC1Q8TDY2 1594 aa27.95■■■□□ 2.07
COX4I1-218ENST00000570123 DCAF8L2P0C7V8 631 aa27.83■■■□□ 2.05
COX4I1-218ENST00000570123 NACADO15069 1562 aa27.82■■■□□ 2.04
COX4I1-218ENST00000570123 MYO15BQ96JP2 1530 aa27.52■■■□□ 2
COX4I1-218ENST00000570123 ZCCHC6Q5VYS8 1495 aaKnown RBP27.32■■□□□ 1.96
COX4I1-218ENST00000570123 PABPN1Q86U42 306 aaKnown RBP eCLIP27.31■■□□□ 1.96
COX4I1-218ENST00000570123 DCAF1Q9Y4B6 1507 aa27.24■■□□□ 1.95
COX4I1-218ENST00000570123 DNAJC5BQ9UF47 199 aa27.22■■□□□ 1.95
COX4I1-218ENST00000570123 UNC13AQ9UPW8 1703 aa27.13■■□□□ 1.93
COX4I1-218ENST00000570123 BICRAQ9NZM4 1560 aa27.03■■□□□ 1.92
COX4I1-218ENST00000570123 SHROOM4Q9ULL8 1493 aa26.83■■□□□ 1.89
COX4I1-218ENST00000570123 SCRIBQ14160 1630 aa26.8■■□□□ 1.88
COX4I1-218ENST00000570123 EIF4G1Q04637 1599 aaKnown RBP26.4■■□□□ 1.82
COX4I1-218ENST00000570123 CC2D2AQ9P2K1 1620 aa26.39■■□□□ 1.81
COX4I1-218ENST00000570123 CECR2Q9BXF3 1484 aa26.35■■□□□ 1.81
COX4I1-218ENST00000570123 NCAPD3P42695 1498 aa25.7■■□□□ 1.7
COX4I1-218ENST00000570123 ATAD2BQ9ULI0 1458 aa25.62■■□□□ 1.69
COX4I1-218ENST00000570123 SMARCA4P51532 1647 aa25.6■■□□□ 1.69
COX4I1-218ENST00000570123 SMARCA2P51531 1590 aa25.59■■□□□ 1.69
COX4I1-218ENST00000570123 BAZ1AQ9NRL2 1556 aaPredicted RBP25.57■■□□□ 1.68
COX4I1-218ENST00000570123 HMGXB3Q12766 1538 aa25.48■■□□□ 1.67
COX4I1-218ENST00000570123 BAZ1BQ9UIG0 1483 aaKnown RBP25.4■■□□□ 1.66
COX4I1-218ENST00000570123 PEG3Q9GZU2 1588 aa25.36■■□□□ 1.65
COX4I1-218ENST00000570123 MROH2BQ7Z745 1585 aa25.35■■□□□ 1.65
COX4I1-218ENST00000570123 ERCC6Q03468 1493 aa25.3■■□□□ 1.64
COX4I1-218ENST00000570123 CUX2O14529 1486 aa25.16■■□□□ 1.62
COX4I1-218ENST00000570123 NESP48681 1621 aa25.14■■□□□ 1.61
COX4I1-218ENST00000570123 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
COX4I1-218ENST00000570123 WIZO95785 1651 aa25.01■■□□□ 1.59
COX4I1-218ENST00000570123 PDS5BQ9NTI5 1447 aa24.99■■□□□ 1.59
COX4I1-218ENST00000570123 CADPSQ9ULU8 1353 aa24.95■■□□□ 1.59
COX4I1-218ENST00000570123 RSF1Q96T23 1441 aaPredicted RBP24.95■■□□□ 1.58
COX4I1-218ENST00000570123 DNAJC5Q9H3Z4 198 aa24.93■■□□□ 1.58
COX4I1-218ENST00000570123 THOC2Q8NI27 1593 aaKnown RBP24.8■■□□□ 1.56
COX4I1-218ENST00000570123 TOP2AP11388 1531 aaKnown RBP24.78■■□□□ 1.56
COX4I1-218ENST00000570123 KIF21AQ7Z4S6 1674 aa24.75■■□□□ 1.55
COX4I1-218ENST00000570123 MRC2Q9UBG0 1479 aa24.7■■□□□ 1.54
COX4I1-218ENST00000570123 CFTRP13569 1480 aa24.68■■□□□ 1.54
COX4I1-218ENST00000570123 CEP164Q9UPV0 1460 aa24.64■■□□□ 1.54
COX4I1-218ENST00000570123 FANCD2Q9BXW9 1451 aa24.64■■□□□ 1.53
COX4I1-218ENST00000570123 WDR62O43379 1518 aa24.58■■□□□ 1.53
COX4I1-218ENST00000570123 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
COX4I1-218ENST00000570123 URB2Q14146 1524 aaKnown RBP24.36■■□□□ 1.49
COX4I1-218ENST00000570123 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
COX4I1-218ENST00000570123 ABCC8Q09428 1581 aa24.22■■□□□ 1.47
COX4I1-218ENST00000570123 TOPBP1Q92547 1522 aa24.17■■□□□ 1.46
COX4I1-218ENST00000570123 IFT140Q96RY7 1462 aa24.17■■□□□ 1.46
COX4I1-218ENST00000570123 OSCARQ8IYS5 282 aa24.13■■□□□ 1.45
COX4I1-218ENST00000570123 DNMBPQ6XZF7 1577 aa24.09■■□□□ 1.45
COX4I1-218ENST00000570123 SUPT5HO00267 1087 aaKnown RBP24.08■■□□□ 1.45
COX4I1-218ENST00000570123 ZNF608Q9ULD9 1512 aaPredicted RBP24.03■■□□□ 1.44
COX4I1-218ENST00000570123 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
COX4I1-218ENST00000570123 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
COX4I1-218ENST00000570123 SOGA1O94964 1423 aa23.9■■□□□ 1.42
COX4I1-218ENST00000570123 AQRO60306 1485 aaKnown RBP eCLIP23.88■■□□□ 1.418e-9■■■■■ 29.4
COX4I1-218ENST00000570123 TARBP1Q13395 1621 aaKnown RBP23.88■■□□□ 1.41
COX4I1-218ENST00000570123 EIF4G3O43432 1585 aaKnown RBP23.87■■□□□ 1.41
COX4I1-218ENST00000570123 RAD54L2Q9Y4B4 1467 aa23.83■■□□□ 1.41
COX4I1-218ENST00000570123 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
COX4I1-218ENST00000570123 CUX1P39880 1505 aa23.79■■□□□ 1.4
COX4I1-218ENST00000570123 TDRD9Q8NDG6 1382 aaKnown RBP23.79■■□□□ 1.4
COX4I1-218ENST00000570123 FBLN2P98095 1184 aa23.78■■□□□ 1.4
COX4I1-218ENST00000570123 WDR97A6NE52 1622 aa23.73■■□□□ 1.39
COX4I1-218ENST00000570123 GRIN2BQ13224 1484 aa23.66■■□□□ 1.38
COX4I1-218ENST00000570123 CHMP7Q8WUX9 453 aaPredicted RBP23.65■■□□□ 1.38
COX4I1-218ENST00000570123 SNAPC4Q5SXM2 1469 aa23.64■■□□□ 1.38
COX4I1-218ENST00000570123 RIMBP3CA6NJZ7 1639 aa23.62■■□□□ 1.37
COX4I1-218ENST00000570123 RIMBP3BA6NNM3 1639 aa23.62■■□□□ 1.37
COX4I1-218ENST00000570123 RIMBP3Q9UFD9 1639 aa23.62■■□□□ 1.37
COX4I1-218ENST00000570123 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
COX4I1-218ENST00000570123 CHD1O14646 1710 aa23.62■■□□□ 1.37
COX4I1-218ENST00000570123 ARHGEF11O15085 1522 aa23.61■■□□□ 1.37
COX4I1-218ENST00000570123 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.371e-6■□□□□ 10.2
COX4I1-218ENST00000570123 GAPVD1Q14C86 1478 aa23.58■■□□□ 1.37
COX4I1-218ENST00000570123 ABCA10Q8WWZ4 1543 aa23.58■■□□□ 1.36
COX4I1-218ENST00000570123 SYNJ2O15056 1496 aa23.53■■□□□ 1.36
COX4I1-218ENST00000570123 CYB5RLQ6IPT4 315 aa23.52■■□□□ 1.36
COX4I1-218ENST00000570123 TOP2BQ02880 1626 aa23.49■■□□□ 1.35
COX4I1-218ENST00000570123 SYNJ1O43426 1573 aa23.48■■□□□ 1.35
COX4I1-218ENST00000570123 ABCA5Q8WWZ7 1642 aa23.45■■□□□ 1.34
COX4I1-218ENST00000570123 BIVM-ERCC5R4GMW8 1640 aa23.45■■□□□ 1.34
COX4I1-218ENST00000570123 PBRM1Q86U86 1689 aa23.43■■□□□ 1.34
COX4I1-218ENST00000570123 CLASP1Q7Z460 1538 aa23.41■■□□□ 1.34
COX4I1-218ENST00000570123 ARAP1Q96P48 1450 aa23.39■■□□□ 1.34
COX4I1-218ENST00000570123 FHAD1B1AJZ9 1412 aa23.32■■□□□ 1.32
COX4I1-218ENST00000570123 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
COX4I1-218ENST00000570123 ERICH3Q5RHP9 1530 aa23.29■■□□□ 1.32
COX4I1-218ENST00000570123 ADAMTS12P58397 1594 aa23.27■■□□□ 1.32
COX4I1-218ENST00000570123 NUP160Q12769 1436 aa23.23■■□□□ 1.31
COX4I1-218ENST00000570123 TRHP20396 242 aaPredicted RBP23.22■■□□□ 1.31
COX4I1-218ENST00000570123 CEP170Q5SW79 1584 aa23.15■■□□□ 1.3
COX4I1-218ENST00000570123 KIF27Q86VH2 1401 aa23.14■■□□□ 1.29
COX4I1-218ENST00000570123 IGF1RP08069 1367 aa23.07■■□□□ 1.28
COX4I1-218ENST00000570123 JPH4Q96JJ6 628 aa23.07■■□□□ 1.28
COX4I1-218ENST00000570123 SHROOM2Q13796 1616 aa23.03■■□□□ 1.28
COX4I1-218ENST00000570123 ERCC6L2Q5T890 1561 aa23.02■■□□□ 1.28
COX4I1-218ENST00000570123 PRG4Q92954 1404 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms