RNA–Protein interactions for RNA: ENST00000570088.1

IRF8-211, Transcript of interferon regulatory factor 8, humanhuman

TSL 4

Gene IRF8, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-211ENST00000570088 NISCHQ9Y2I1 1504 aa37.69■■■■□ 3.62
IRF8-211ENST00000570088 CCDC180Q9P1Z9 1646 aa33.71■■■□□ 2.99
IRF8-211ENST00000570088 ABCC9O60706 1549 aa33.39■■■□□ 2.94
IRF8-211ENST00000570088 RB1CC1Q8TDY2 1594 aa31.93■■■□□ 2.7
IRF8-211ENST00000570088 NACADO15069 1562 aa31.77■■■□□ 2.68
IRF8-211ENST00000570088 DCAF8L2P0C7V8 631 aa31.63■■■□□ 2.65
IRF8-211ENST00000570088 MYO15BQ96JP2 1530 aa31.44■■■□□ 2.62
IRF8-211ENST00000570088 ZCCHC6Q5VYS8 1495 aaKnown RBP31.33■■■□□ 2.61
IRF8-211ENST00000570088 UNC13AQ9UPW8 1703 aa31.23■■■□□ 2.59
IRF8-211ENST00000570088 DCAF1Q9Y4B6 1507 aa31.16■■■□□ 2.58
IRF8-211ENST00000570088 PABPN1Q86U42 306 aaKnown RBP eCLIP31.11■■■□□ 2.57
IRF8-211ENST00000570088 DNAJC5BQ9UF47 199 aa31■■■□□ 2.55
IRF8-211ENST00000570088 BICRAQ9NZM4 1560 aa31■■■□□ 2.55
IRF8-211ENST00000570088 SCRIBQ14160 1630 aa30.75■■■□□ 2.51
IRF8-211ENST00000570088 SHROOM4Q9ULL8 1493 aa30.6■■■□□ 2.49
IRF8-211ENST00000570088 EIF4G1Q04637 1599 aaKnown RBP30.21■■■□□ 2.43
IRF8-211ENST00000570088 CC2D2AQ9P2K1 1620 aa30.19■■■□□ 2.42
IRF8-211ENST00000570088 CECR2Q9BXF3 1484 aa30.05■■■□□ 2.4
IRF8-211ENST00000570088 SMARCA4P51532 1647 aa29.36■■■□□ 2.29
IRF8-211ENST00000570088 NCAPD3P42695 1498 aa29.31■■■□□ 2.28
IRF8-211ENST00000570088 ATAD2BQ9ULI0 1458 aa29.29■■■□□ 2.28
IRF8-211ENST00000570088 BAZ1AQ9NRL2 1556 aaPredicted RBP29.25■■■□□ 2.27
IRF8-211ENST00000570088 SMARCA2P51531 1590 aa29.23■■■□□ 2.27
IRF8-211ENST00000570088 HMGXB3Q12766 1538 aa29.16■■■□□ 2.26
IRF8-211ENST00000570088 PEG3Q9GZU2 1588 aa29.06■■■□□ 2.24
IRF8-211ENST00000570088 MROH2BQ7Z745 1585 aa29.05■■■□□ 2.24
IRF8-211ENST00000570088 BAZ1BQ9UIG0 1483 aaKnown RBP29.03■■■□□ 2.24
IRF8-211ENST00000570088 ERCC6Q03468 1493 aa28.81■■■□□ 2.2
IRF8-211ENST00000570088 NESP48681 1621 aa28.78■■■□□ 2.2
IRF8-211ENST00000570088 WIZO95785 1651 aa28.73■■■□□ 2.19
IRF8-211ENST00000570088 CUX2O14529 1486 aa28.72■■■□□ 2.19
IRF8-211ENST00000570088 LAMC3Q9Y6N6 1575 aa28.63■■■□□ 2.17
IRF8-211ENST00000570088 DNAJC5Q9H3Z4 198 aa28.6■■■□□ 2.17
IRF8-211ENST00000570088 RSF1Q96T23 1441 aaPredicted RBP28.55■■■□□ 2.16
IRF8-211ENST00000570088 THOC2Q8NI27 1593 aaKnown RBP28.45■■■□□ 2.14
IRF8-211ENST00000570088 KIF21AQ7Z4S6 1674 aa28.45■■■□□ 2.14
IRF8-211ENST00000570088 CADPSQ9ULU8 1353 aa28.43■■■□□ 2.14
IRF8-211ENST00000570088 PDS5BQ9NTI5 1447 aa28.43■■■□□ 2.14
IRF8-211ENST00000570088 TOP2AP11388 1531 aaKnown RBP28.39■■■□□ 2.14
IRF8-211ENST00000570088 CFTRP13569 1480 aa28.2■■■□□ 2.1
IRF8-211ENST00000570088 MRC2Q9UBG0 1479 aa28.19■■■□□ 2.1
IRF8-211ENST00000570088 CEP164Q9UPV0 1460 aa28.15■■■□□ 2.1
IRF8-211ENST00000570088 FANCD2Q9BXW9 1451 aa28.14■■■□□ 2.09
IRF8-211ENST00000570088 WDR62O43379 1518 aa28.13■■■□□ 2.09
IRF8-211ENST00000570088 CCDC88BA6NC98 1476 aa28.04■■■□□ 2.08
IRF8-211ENST00000570088 PRDM2Q13029 1718 aa27.98■■■□□ 2.07
IRF8-211ENST00000570088 URB2Q14146 1524 aaKnown RBP27.89■■■□□ 2.06
IRF8-211ENST00000570088 TOPBP1Q92547 1522 aa27.64■■■□□ 2.02
IRF8-211ENST00000570088 ABCC8Q09428 1581 aa27.58■■■□□ 2.01
IRF8-211ENST00000570088 DNMBPQ6XZF7 1577 aa27.58■■■□□ 2.01
IRF8-211ENST00000570088 IFT140Q96RY7 1462 aa27.56■■■□□ 2
IRF8-211ENST00000570088 SUPT5HO00267 1087 aaKnown RBP27.49■■□□□ 1.99
IRF8-211ENST00000570088 ZNF608Q9ULD9 1512 aaPredicted RBP27.49■■□□□ 1.99
IRF8-211ENST00000570088 EIF4G3O43432 1585 aaKnown RBP27.39■■□□□ 1.97
IRF8-211ENST00000570088 POLA1P09884 1462 aaPredicted RBP27.38■■□□□ 1.97
IRF8-211ENST00000570088 TARBP1Q13395 1621 aaKnown RBP27.38■■□□□ 1.97
IRF8-211ENST00000570088 OSCARQ8IYS5 282 aa27.36■■□□□ 1.97
IRF8-211ENST00000570088 CUX1P39880 1505 aa27.28■■□□□ 1.96
IRF8-211ENST00000570088 AQRO60306 1485 aaKnown RBP eCLIP27.26■■□□□ 1.95
IRF8-211ENST00000570088 RAD54L2Q9Y4B4 1467 aa27.26■■□□□ 1.95
IRF8-211ENST00000570088 FGD5Q6ZNL6 1462 aa27.25■■□□□ 1.95
IRF8-211ENST00000570088 SOGA1O94964 1423 aa27.24■■□□□ 1.95
IRF8-211ENST00000570088 TRIM41Q8WV44 630 aa27.22■■□□□ 1.95
IRF8-211ENST00000570088 TDRD9Q8NDG6 1382 aaKnown RBP27.14■■□□□ 1.94
IRF8-211ENST00000570088 WDR97A6NE52 1622 aa27.12■■□□□ 1.93
IRF8-211ENST00000570088 CHD1O14646 1710 aa27.12■■□□□ 1.93
IRF8-211ENST00000570088 RIMBP3CA6NJZ7 1639 aa27.02■■□□□ 1.92
IRF8-211ENST00000570088 RIMBP3BA6NNM3 1639 aa27.02■■□□□ 1.92
IRF8-211ENST00000570088 RIMBP3Q9UFD9 1639 aa27.02■■□□□ 1.92
IRF8-211ENST00000570088 SNAPC4Q5SXM2 1469 aa27.02■■□□□ 1.92
IRF8-211ENST00000570088 FBLN2P98095 1184 aa27■■□□□ 1.91
IRF8-211ENST00000570088 GRIN2BQ13224 1484 aa26.98■■□□□ 1.91
IRF8-211ENST00000570088 ARHGEF11O15085 1522 aa26.96■■□□□ 1.91
IRF8-211ENST00000570088 ABCA10Q8WWZ4 1543 aa26.95■■□□□ 1.91
IRF8-211ENST00000570088 MAGI1Q96QZ7 1491 aaPredicted RBP26.95■■□□□ 1.91
IRF8-211ENST00000570088 BIVM-ERCC5R4GMW8 1640 aa26.94■■□□□ 1.9
IRF8-211ENST00000570088 PBRM1Q86U86 1689 aa26.94■■□□□ 1.9
IRF8-211ENST00000570088 TOP2BQ02880 1626 aa26.94■■□□□ 1.9
IRF8-211ENST00000570088 WRNQ14191 1432 aaPredicted RBP eCLIP26.93■■□□□ 1.9
IRF8-211ENST00000570088 GAPVD1Q14C86 1478 aa26.93■■□□□ 1.9
IRF8-211ENST00000570088 SYNJ1O43426 1573 aa26.92■■□□□ 1.9
IRF8-211ENST00000570088 ABCA5Q8WWZ7 1642 aa26.92■■□□□ 1.9
IRF8-211ENST00000570088 SYNJ2O15056 1496 aa26.86■■□□□ 1.89
IRF8-211ENST00000570088 CHMP7Q8WUX9 453 aaPredicted RBP26.85■■□□□ 1.89
IRF8-211ENST00000570088 CLASP1Q7Z460 1538 aa26.8■■□□□ 1.88
IRF8-211ENST00000570088 ARAP1Q96P48 1450 aa26.72■■□□□ 1.87
IRF8-211ENST00000570088 ADAMTS12P58397 1594 aa26.7■■□□□ 1.86
IRF8-211ENST00000570088 CYB5RLQ6IPT4 315 aa26.69■■□□□ 1.86
IRF8-211ENST00000570088 GRIN2AQ12879 1464 aa26.65■■□□□ 1.86
IRF8-211ENST00000570088 ERICH3Q5RHP9 1530 aa26.63■■□□□ 1.85
IRF8-211ENST00000570088 FHAD1B1AJZ9 1412 aa26.59■■□□□ 1.85
IRF8-211ENST00000570088 CEP170Q5SW79 1584 aa26.55■■□□□ 1.84
IRF8-211ENST00000570088 NUP160Q12769 1436 aa26.54■■□□□ 1.84
IRF8-211ENST00000570088 ERCC6L2Q5T890 1561 aa26.41■■□□□ 1.82
IRF8-211ENST00000570088 SHROOM2Q13796 1616 aa26.4■■□□□ 1.82
IRF8-211ENST00000570088 KIF27Q86VH2 1401 aa26.39■■□□□ 1.82
IRF8-211ENST00000570088 TRHP20396 242 aaPredicted RBP26.34■■□□□ 1.81
IRF8-211ENST00000570088 IGF1RP08069 1367 aa26.33■■□□□ 1.8
IRF8-211ENST00000570088 CUL7Q14999 1698 aa26.32■■□□□ 1.8
IRF8-211ENST00000570088 RUSC2Q8N2Y8 1516 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms