RNA–Protein interactions for RNA: ENST00000570015.1

CISTR-201, chondrogenesis-associated transcript, humanhuman

TSL 2 BASIC

Gene CISTR, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CISTR-201ENST00000570015 NISCHQ9Y2I1 1504 aa27.77■■■□□ 2.04
CISTR-201ENST00000570015 CCDC180Q9P1Z9 1646 aa24.54■■□□□ 1.52
CISTR-201ENST00000570015 ABCC9O60706 1549 aa23.76■■□□□ 1.39
CISTR-201ENST00000570015 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
CISTR-201ENST00000570015 DCAF8L2P0C7V8 631 aa23.24■■□□□ 1.31
CISTR-201ENST00000570015 DCAF1Q9Y4B6 1507 aa23.07■■□□□ 1.28
CISTR-201ENST00000570015 MYO15BQ96JP2 1530 aa23.01■■□□□ 1.27
CISTR-201ENST00000570015 NACADO15069 1562 aa22.93■■□□□ 1.26
CISTR-201ENST00000570015 RB1CC1Q8TDY2 1594 aa22.85■■□□□ 1.25
CISTR-201ENST00000570015 SCRIBQ14160 1630 aa22.43■■□□□ 1.18
CISTR-201ENST00000570015 PABPN1Q86U42 306 aaKnown RBP eCLIP22.33■■□□□ 1.17
CISTR-201ENST00000570015 UNC13AQ9UPW8 1703 aa22.32■■□□□ 1.16
CISTR-201ENST00000570015 SHROOM4Q9ULL8 1493 aa22.28■■□□□ 1.16
CISTR-201ENST00000570015 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
CISTR-201ENST00000570015 CECR2Q9BXF3 1484 aa21.6■■□□□ 1.05
CISTR-201ENST00000570015 EIF4G1Q04637 1599 aaKnown RBP21.57■■□□□ 1.04
CISTR-201ENST00000570015 DNAJC5BQ9UF47 199 aa21.56■■□□□ 1.04
CISTR-201ENST00000570015 BAZ1AQ9NRL2 1556 aaPredicted RBP21.51■■□□□ 1.03
CISTR-201ENST00000570015 SMARCA4P51532 1647 aa21.46■■□□□ 1.03
CISTR-201ENST00000570015 CC2D2AQ9P2K1 1620 aa21.42■■□□□ 1.02
CISTR-201ENST00000570015 MROH2BQ7Z745 1585 aa21.4■■□□□ 1.02
CISTR-201ENST00000570015 RSF1Q96T23 1441 aaPredicted RBP21.32■■□□□ 1
CISTR-201ENST00000570015 PEG3Q9GZU2 1588 aa21.28■■□□□ 1
CISTR-201ENST00000570015 SMARCA2P51531 1590 aa21.23■□□□□ 0.99
CISTR-201ENST00000570015 ATAD2BQ9ULI0 1458 aa21.22■□□□□ 0.99
CISTR-201ENST00000570015 WIZO95785 1651 aa21.18■□□□□ 0.98
CISTR-201ENST00000570015 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
CISTR-201ENST00000570015 SUPT5HO00267 1087 aaKnown RBP21.12■□□□□ 0.97
CISTR-201ENST00000570015 HMGXB3Q12766 1538 aa21.11■□□□□ 0.97
CISTR-201ENST00000570015 BAZ1BQ9UIG0 1483 aaKnown RBP21.09■□□□□ 0.97
CISTR-201ENST00000570015 TOP2AP11388 1531 aaKnown RBP21.03■□□□□ 0.96
CISTR-201ENST00000570015 CCDC88BA6NC98 1476 aa20.73■□□□□ 0.91
CISTR-201ENST00000570015 NESP48681 1621 aa20.64■□□□□ 0.9
CISTR-201ENST00000570015 CADPSQ9ULU8 1353 aa20.58■□□□□ 0.88
CISTR-201ENST00000570015 CFTRP13569 1480 aa20.52■□□□□ 0.88
CISTR-201ENST00000570015 LAMC3Q9Y6N6 1575 aa20.51■□□□□ 0.87
CISTR-201ENST00000570015 PRDM2Q13029 1718 aa20.45■□□□□ 0.86
CISTR-201ENST00000570015 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
CISTR-201ENST00000570015 PDS5BQ9NTI5 1447 aa20.41■□□□□ 0.86
CISTR-201ENST00000570015 FANCD2Q9BXW9 1451 aa20.36■□□□□ 0.85
CISTR-201ENST00000570015 KIF21AQ7Z4S6 1674 aa20.32■□□□□ 0.84
CISTR-201ENST00000570015 CEP164Q9UPV0 1460 aa20.29■□□□□ 0.84
CISTR-201ENST00000570015 MRC2Q9UBG0 1479 aa20.19■□□□□ 0.82
CISTR-201ENST00000570015 THOC2Q8NI27 1593 aaKnown RBP20.15■□□□□ 0.82
CISTR-201ENST00000570015 URB2Q14146 1524 aaKnown RBP20.14■□□□□ 0.81
CISTR-201ENST00000570015 ABCC8Q09428 1581 aa20.11■□□□□ 0.81
CISTR-201ENST00000570015 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
CISTR-201ENST00000570015 DNMBPQ6XZF7 1577 aa20.07■□□□□ 0.8
CISTR-201ENST00000570015 WDR62O43379 1518 aa20.07■□□□□ 0.8
CISTR-201ENST00000570015 TOPBP1Q92547 1522 aa20.06■□□□□ 0.8
CISTR-201ENST00000570015 CUX1P39880 1505 aa20.05■□□□□ 0.8
CISTR-201ENST00000570015 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
CISTR-201ENST00000570015 BIVM-ERCC5R4GMW8 1640 aa20.04■□□□□ 0.8
CISTR-201ENST00000570015 SYNJ1O43426 1573 aa20.03■□□□□ 0.8
CISTR-201ENST00000570015 CUX2O14529 1486 aa19.99■□□□□ 0.79
CISTR-201ENST00000570015 CHIC1Q5VXU3 224 aa19.97■□□□□ 0.79
CISTR-201ENST00000570015 FGD5Q6ZNL6 1462 aa19.92■□□□□ 0.78
CISTR-201ENST00000570015 POLA1P09884 1462 aaPredicted RBP19.9■□□□□ 0.78
CISTR-201ENST00000570015 RAD54L2Q9Y4B4 1467 aa19.88■□□□□ 0.77
CISTR-201ENST00000570015 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
CISTR-201ENST00000570015 SOGA1O94964 1423 aa19.87■□□□□ 0.77
CISTR-201ENST00000570015 IFT140Q96RY7 1462 aa19.84■□□□□ 0.77
CISTR-201ENST00000570015 TARBP1Q13395 1621 aaKnown RBP19.79■□□□□ 0.76
CISTR-201ENST00000570015 ZNF608Q9ULD9 1512 aaPredicted RBP19.78■□□□□ 0.76
CISTR-201ENST00000570015 WDR97A6NE52 1622 aa19.76■□□□□ 0.75
CISTR-201ENST00000570015 TDRD9Q8NDG6 1382 aaKnown RBP19.76■□□□□ 0.75
CISTR-201ENST00000570015 ABCA10Q8WWZ4 1543 aa19.76■□□□□ 0.75
CISTR-201ENST00000570015 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.75
CISTR-201ENST00000570015 EIF4G3O43432 1585 aaKnown RBP19.66■□□□□ 0.74
CISTR-201ENST00000570015 ABCA5Q8WWZ7 1642 aa19.65■□□□□ 0.74
CISTR-201ENST00000570015 KIF27Q86VH2 1401 aa19.64■□□□□ 0.73
CISTR-201ENST00000570015 EEA1Q15075 1411 aa19.63■□□□□ 0.73
CISTR-201ENST00000570015 GAPVD1Q14C86 1478 aa19.62■□□□□ 0.73
CISTR-201ENST00000570015 RUSC2Q8N2Y8 1516 aa19.56■□□□□ 0.72
CISTR-201ENST00000570015 GRIN2BQ13224 1484 aa19.56■□□□□ 0.72
CISTR-201ENST00000570015 FAM9AQ8IZU1 332 aaPredicted RBP19.56■□□□□ 0.72
CISTR-201ENST00000570015 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
CISTR-201ENST00000570015 PBRM1Q86U86 1689 aa19.53■□□□□ 0.72
CISTR-201ENST00000570015 FBLN2P98095 1184 aa19.53■□□□□ 0.72
CISTR-201ENST00000570015 SNAPC4Q5SXM2 1469 aa19.53■□□□□ 0.72
CISTR-201ENST00000570015 IGF1RP08069 1367 aa19.47■□□□□ 0.71
CISTR-201ENST00000570015 CUL7Q14999 1698 aa19.47■□□□□ 0.71
CISTR-201ENST00000570015 CHMP7Q8WUX9 453 aaPredicted RBP19.45■□□□□ 0.7
CISTR-201ENST00000570015 MAGI1Q96QZ7 1491 aaPredicted RBP19.45■□□□□ 0.7
CISTR-201ENST00000570015 CSRNP3Q8WYN3 585 aa19.44■□□□□ 0.7
CISTR-201ENST00000570015 ADAMTS12P58397 1594 aa19.42■□□□□ 0.7
CISTR-201ENST00000570015 PRXQ9BXM0 1461 aa19.41■□□□□ 0.7
CISTR-201ENST00000570015 FHAD1B1AJZ9 1412 aa19.39■□□□□ 0.69
CISTR-201ENST00000570015 KIF21BO75037 1637 aa19.39■□□□□ 0.69
CISTR-201ENST00000570015 SYNJ2O15056 1496 aa19.38■□□□□ 0.69
CISTR-201ENST00000570015 CARMIL1Q5VZK9 1371 aa19.38■□□□□ 0.69
CISTR-201ENST00000570015 EHMT2Q96KQ7 1210 aa19.36■□□□□ 0.69
CISTR-201ENST00000570015 CHD1O14646 1710 aa19.36■□□□□ 0.69
CISTR-201ENST00000570015 OSCARQ8IYS5 282 aa19.33■□□□□ 0.68
CISTR-201ENST00000570015 RAPGEF2Q9Y4G8 1499 aa19.33■□□□□ 0.68
CISTR-201ENST00000570015 GRIN2AQ12879 1464 aa19.3■□□□□ 0.68
CISTR-201ENST00000570015 GOLGA3Q08378 1498 aa19.28■□□□□ 0.68
CISTR-201ENST00000570015 CEP170Q5SW79 1584 aa19.2■□□□□ 0.66
CISTR-201ENST00000570015 NUP160Q12769 1436 aa19.19■□□□□ 0.66
CISTR-201ENST00000570015 CTTNBP2Q8WZ74 1663 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms