RNA–Protein interactions for RNA: ENST00000569952.1

DHX38-213, Transcript of DEAH-box helicase 38, humanhuman

TSL 2

Gene DHX38, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX38-213ENST00000569952 NISCHQ9Y2I1 1504 aa33.94■■■■□ 3.02
DHX38-213ENST00000569952 ABCC9O60706 1549 aa31.29■■■□□ 2.6
DHX38-213ENST00000569952 CCDC180Q9P1Z9 1646 aa30.84■■■□□ 2.53
DHX38-213ENST00000569952 DNAJC5BQ9UF47 199 aa29.99■■■□□ 2.39
DHX38-213ENST00000569952 RB1CC1Q8TDY2 1594 aa29.63■■■□□ 2.33
DHX38-213ENST00000569952 NACADO15069 1562 aa29.3■■■□□ 2.28
DHX38-213ENST00000569952 PABPN1Q86U42 306 aaKnown RBP eCLIP28.97■■■□□ 2.232e-9■■■□□ 15.1
DHX38-213ENST00000569952 UNC13AQ9UPW8 1703 aa28.97■■■□□ 2.23
DHX38-213ENST00000569952 BICRAQ9NZM4 1560 aa28.79■■■□□ 2.2
DHX38-213ENST00000569952 MYO15BQ96JP2 1530 aa28.79■■■□□ 2.2
DHX38-213ENST00000569952 DCAF8L2P0C7V8 631 aa28.67■■■□□ 2.18
DHX38-213ENST00000569952 SHROOM4Q9ULL8 1493 aa28.48■■■□□ 2.15
DHX38-213ENST00000569952 CECR2Q9BXF3 1484 aa28.33■■■□□ 2.13
DHX38-213ENST00000569952 CC2D2AQ9P2K1 1620 aa28.32■■■□□ 2.12
DHX38-213ENST00000569952 DNAJC5Q9H3Z4 198 aa28.13■■■□□ 2.09
DHX38-213ENST00000569952 DCAF1Q9Y4B6 1507 aa28.13■■■□□ 2.09
DHX38-213ENST00000569952 EIF4G1Q04637 1599 aaKnown RBP28.11■■■□□ 2.09
DHX38-213ENST00000569952 ZCCHC6Q5VYS8 1495 aaKnown RBP27.99■■■□□ 2.07
DHX38-213ENST00000569952 SCRIBQ14160 1630 aa27.86■■■□□ 2.05
DHX38-213ENST00000569952 CUX2O14529 1486 aa27.42■■□□□ 1.98
DHX38-213ENST00000569952 ERCC6Q03468 1493 aa27.08■■□□□ 1.93
DHX38-213ENST00000569952 NCAPD3P42695 1498 aa27.06■■□□□ 1.92
DHX38-213ENST00000569952 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
DHX38-213ENST00000569952 HMGXB3Q12766 1538 aa26.8■■□□□ 1.88
DHX38-213ENST00000569952 SMARCA2P51531 1590 aa26.74■■□□□ 1.87
DHX38-213ENST00000569952 NESP48681 1621 aa26.7■■□□□ 1.86
DHX38-213ENST00000569952 THOC2Q8NI27 1593 aaKnown RBP26.67■■□□□ 1.86
DHX38-213ENST00000569952 SMARCA4P51532 1647 aa26.62■■□□□ 1.85
DHX38-213ENST00000569952 LAMC3Q9Y6N6 1575 aa26.54■■□□□ 1.84
DHX38-213ENST00000569952 BAZ1BQ9UIG0 1483 aaKnown RBP26.48■■□□□ 1.83
DHX38-213ENST00000569952 PEG3Q9GZU2 1588 aa26.47■■□□□ 1.83
DHX38-213ENST00000569952 BAZ1AQ9NRL2 1556 aaPredicted RBP26.41■■□□□ 1.82
DHX38-213ENST00000569952 KIF21AQ7Z4S6 1674 aa26.39■■□□□ 1.82
DHX38-213ENST00000569952 TRIM41Q8WV44 630 aa26.39■■□□□ 1.82
DHX38-213ENST00000569952 PDS5BQ9NTI5 1447 aa26.38■■□□□ 1.81
DHX38-213ENST00000569952 MRC2Q9UBG0 1479 aa26.17■■□□□ 1.78
DHX38-213ENST00000569952 WDR62O43379 1518 aa26.17■■□□□ 1.78
DHX38-213ENST00000569952 CADPSQ9ULU8 1353 aa26.14■■□□□ 1.78
DHX38-213ENST00000569952 AEBP2Q6ZN18 517 aaPredicted RBP26.11■■□□□ 1.77
DHX38-213ENST00000569952 MROH2BQ7Z745 1585 aa26.09■■□□□ 1.77
DHX38-213ENST00000569952 OSCARQ8IYS5 282 aa25.96■■□□□ 1.75
DHX38-213ENST00000569952 CEP164Q9UPV0 1460 aa25.91■■□□□ 1.74
DHX38-213ENST00000569952 CHIC1Q5VXU3 224 aa25.88■■□□□ 1.73
DHX38-213ENST00000569952 FANCD2Q9BXW9 1451 aa25.81■■□□□ 1.72
DHX38-213ENST00000569952 CFTRP13569 1480 aa25.73■■□□□ 1.71
DHX38-213ENST00000569952 WIZO95785 1651 aa25.73■■□□□ 1.71
DHX38-213ENST00000569952 RIMBP3CA6NJZ7 1639 aa25.7■■□□□ 1.71
DHX38-213ENST00000569952 RIMBP3BA6NNM3 1639 aa25.7■■□□□ 1.71
DHX38-213ENST00000569952 RIMBP3Q9UFD9 1639 aa25.7■■□□□ 1.71
DHX38-213ENST00000569952 URB2Q14146 1524 aaKnown RBP25.65■■□□□ 1.7
DHX38-213ENST00000569952 ARHGEF11O15085 1522 aa25.56■■□□□ 1.68
DHX38-213ENST00000569952 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
DHX38-213ENST00000569952 IFT140Q96RY7 1462 aa25.46■■□□□ 1.67
DHX38-213ENST00000569952 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
DHX38-213ENST00000569952 ZNF608Q9ULD9 1512 aaPredicted RBP25.4■■□□□ 1.66
DHX38-213ENST00000569952 RSF1Q96T23 1441 aaPredicted RBP25.32■■□□□ 1.64
DHX38-213ENST00000569952 CYB5RLQ6IPT4 315 aa25.31■■□□□ 1.64
DHX38-213ENST00000569952 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
DHX38-213ENST00000569952 EIF4G3O43432 1585 aaKnown RBP25.27■■□□□ 1.64
DHX38-213ENST00000569952 ARAP1Q96P48 1450 aa25.25■■□□□ 1.63
DHX38-213ENST00000569952 ABCC8Q09428 1581 aa25.25■■□□□ 1.63
DHX38-213ENST00000569952 CHD1O14646 1710 aa25.21■■□□□ 1.63
DHX38-213ENST00000569952 TRHP20396 242 aaPredicted RBP25.2■■□□□ 1.62
DHX38-213ENST00000569952 TARBP1Q13395 1621 aaKnown RBP25.14■■□□□ 1.61
DHX38-213ENST00000569952 DNMBPQ6XZF7 1577 aa25.14■■□□□ 1.61
DHX38-213ENST00000569952 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
DHX38-213ENST00000569952 AQRO60306 1485 aaKnown RBP eCLIP25.08■■□□□ 1.62e-6■■■■■ 33
DHX38-213ENST00000569952 CLASP1Q7Z460 1538 aa24.96■■□□□ 1.59
DHX38-213ENST00000569952 POLA1P09884 1462 aaPredicted RBP24.96■■□□□ 1.59
DHX38-213ENST00000569952 FBLN2P98095 1184 aa24.94■■□□□ 1.58
DHX38-213ENST00000569952 WDR97A6NE52 1622 aa24.93■■□□□ 1.58
DHX38-213ENST00000569952 SYNJ1O43426 1573 aa24.85■■□□□ 1.57
DHX38-213ENST00000569952 MAGI1Q96QZ7 1491 aaPredicted RBP24.82■■□□□ 1.56
DHX38-213ENST00000569952 SNAPC4Q5SXM2 1469 aa24.81■■□□□ 1.56
DHX38-213ENST00000569952 RAD54L2Q9Y4B4 1467 aa24.81■■□□□ 1.56
DHX38-213ENST00000569952 SOGA1O94964 1423 aa24.8■■□□□ 1.56
DHX38-213ENST00000569952 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
DHX38-213ENST00000569952 CHMP7Q8WUX9 453 aaPredicted RBP24.74■■□□□ 1.55
DHX38-213ENST00000569952 SYNJ2O15056 1496 aa24.72■■□□□ 1.55
DHX38-213ENST00000569952 GRIN2BQ13224 1484 aa24.7■■□□□ 1.55
DHX38-213ENST00000569952 GAPVD1Q14C86 1478 aa24.69■■□□□ 1.54
DHX38-213ENST00000569952 FGD5Q6ZNL6 1462 aa24.67■■□□□ 1.54
DHX38-213ENST00000569952 PBRM1Q86U86 1689 aa24.56■■□□□ 1.52
DHX38-213ENST00000569952 CUX1P39880 1505 aa24.56■■□□□ 1.52
DHX38-213ENST00000569952 ABCA5Q8WWZ7 1642 aa24.45■■□□□ 1.5
DHX38-213ENST00000569952 ABCA10Q8WWZ4 1543 aa24.43■■□□□ 1.5
DHX38-213ENST00000569952 ERCC6L2Q5T890 1561 aa24.42■■□□□ 1.5
DHX38-213ENST00000569952 KIF13AQ9H1H9 1805 aa24.4■■□□□ 1.5
DHX38-213ENST00000569952 GRIN2AQ12879 1464 aa24.38■■□□□ 1.49
DHX38-213ENST00000569952 CEP170Q5SW79 1584 aa24.38■■□□□ 1.49
DHX38-213ENST00000569952 SHROOM2Q13796 1616 aa24.38■■□□□ 1.49
DHX38-213ENST00000569952 NUP160Q12769 1436 aa24.37■■□□□ 1.49
DHX38-213ENST00000569952 ADAMTS12P58397 1594 aa24.29■■□□□ 1.48
DHX38-213ENST00000569952 FHAD1B1AJZ9 1412 aa24.19■■□□□ 1.46
DHX38-213ENST00000569952 ABCC10Q5T3U5 1492 aa24.17■■□□□ 1.46
DHX38-213ENST00000569952 WRNQ14191 1432 aaPredicted RBP eCLIP24.16■■□□□ 1.46
DHX38-213ENST00000569952 MAPKBP1O60336 1514 aa24.14■■□□□ 1.45
DHX38-213ENST00000569952 ERICH3Q5RHP9 1530 aa24.12■■□□□ 1.45
DHX38-213ENST00000569952 PRG4Q92954 1404 aaPredicted RBP24.1■■□□□ 1.45
DHX38-213ENST00000569952 DIP2BQ9P265 1576 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms