RNA–Protein interactions for RNA: ENST00000569915.1

CSK-214, Transcript of C-terminal Src kinase, humanhuman

TSL 4

Gene CSK, Length 578 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSK-214ENST00000569915 NISCHQ9Y2I1 1504 aa31.83■■■□□ 2.69
CSK-214ENST00000569915 ABCC9O60706 1549 aa28.43■■■□□ 2.14
CSK-214ENST00000569915 CCDC180Q9P1Z9 1646 aa28.43■■■□□ 2.14
CSK-214ENST00000569915 RB1CC1Q8TDY2 1594 aa27.01■■□□□ 1.92
CSK-214ENST00000569915 NACADO15069 1562 aa26.87■■□□□ 1.89
CSK-214ENST00000569915 DCAF8L2P0C7V8 631 aa26.77■■□□□ 1.88
CSK-214ENST00000569915 DNAJC5BQ9UF47 199 aa26.75■■□□□ 1.87
CSK-214ENST00000569915 MYO15BQ96JP2 1530 aa26.55■■□□□ 1.84
CSK-214ENST00000569915 PABPN1Q86U42 306 aaKnown RBP eCLIP26.53■■□□□ 1.84
CSK-214ENST00000569915 UNC13AQ9UPW8 1703 aa26.47■■□□□ 1.83
CSK-214ENST00000569915 ZCCHC6Q5VYS8 1495 aaKnown RBP26.4■■□□□ 1.82
CSK-214ENST00000569915 BICRAQ9NZM4 1560 aa26.37■■□□□ 1.81
CSK-214ENST00000569915 DCAF1Q9Y4B6 1507 aa26.26■■□□□ 1.79
CSK-214ENST00000569915 SCRIBQ14160 1630 aa25.97■■□□□ 1.75
CSK-214ENST00000569915 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
CSK-214ENST00000569915 CC2D2AQ9P2K1 1620 aa25.67■■□□□ 1.7
CSK-214ENST00000569915 EIF4G1Q04637 1599 aaKnown RBP25.65■■□□□ 1.7
CSK-214ENST00000569915 CECR2Q9BXF3 1484 aa25.58■■□□□ 1.69
CSK-214ENST00000569915 NCAPD3P42695 1498 aa24.88■■□□□ 1.57
CSK-214ENST00000569915 ATAD2BQ9ULI0 1458 aa24.83■■□□□ 1.56
CSK-214ENST00000569915 SMARCA4P51532 1647 aa24.79■■□□□ 1.56
CSK-214ENST00000569915 SMARCA2P51531 1590 aa24.65■■□□□ 1.54
CSK-214ENST00000569915 HMGXB3Q12766 1538 aa24.64■■□□□ 1.53
CSK-214ENST00000569915 BAZ1AQ9NRL2 1556 aaPredicted RBP24.63■■□□□ 1.53
CSK-214ENST00000569915 MROH2BQ7Z745 1585 aa24.58■■□□□ 1.52
CSK-214ENST00000569915 PEG3Q9GZU2 1588 aa24.55■■□□□ 1.52
CSK-214ENST00000569915 BAZ1BQ9UIG0 1483 aaKnown RBP24.51■■□□□ 1.51
CSK-214ENST00000569915 NESP48681 1621 aa24.51■■□□□ 1.51
CSK-214ENST00000569915 ERCC6Q03468 1493 aa24.43■■□□□ 1.5
CSK-214ENST00000569915 CUX2O14529 1486 aa24.39■■□□□ 1.5
CSK-214ENST00000569915 DNAJC5Q9H3Z4 198 aa24.36■■□□□ 1.49
CSK-214ENST00000569915 WIZO95785 1651 aa24.26■■□□□ 1.47
CSK-214ENST00000569915 LAMC3Q9Y6N6 1575 aa24.22■■□□□ 1.47
CSK-214ENST00000569915 THOC2Q8NI27 1593 aaKnown RBP24.18■■□□□ 1.46
CSK-214ENST00000569915 CADPSQ9ULU8 1353 aa24.11■■□□□ 1.45
CSK-214ENST00000569915 KIF21AQ7Z4S6 1674 aa24.11■■□□□ 1.45
CSK-214ENST00000569915 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
CSK-214ENST00000569915 PDS5BQ9NTI5 1447 aa24.07■■□□□ 1.44
CSK-214ENST00000569915 TOP2AP11388 1531 aaKnown RBP23.9■■□□□ 1.42
CSK-214ENST00000569915 MRC2Q9UBG0 1479 aa23.89■■□□□ 1.42
CSK-214ENST00000569915 CFTRP13569 1480 aa23.87■■□□□ 1.41
CSK-214ENST00000569915 WDR62O43379 1518 aa23.86■■□□□ 1.41
CSK-214ENST00000569915 FANCD2Q9BXW9 1451 aa23.81■■□□□ 1.4
CSK-214ENST00000569915 CEP164Q9UPV0 1460 aa23.79■■□□□ 1.4
CSK-214ENST00000569915 CCDC88BA6NC98 1476 aa23.69■■□□□ 1.38
CSK-214ENST00000569915 URB2Q14146 1524 aaKnown RBP23.68■■□□□ 1.38
CSK-214ENST00000569915 PRDM2Q13029 1718 aa23.51■■□□□ 1.35
CSK-214ENST00000569915 TOPBP1Q92547 1522 aa23.39■■□□□ 1.34
CSK-214ENST00000569915 ZNF608Q9ULD9 1512 aaPredicted RBP23.38■■□□□ 1.33
CSK-214ENST00000569915 IFT140Q96RY7 1462 aa23.32■■□□□ 1.32
CSK-214ENST00000569915 OSCARQ8IYS5 282 aa23.31■■□□□ 1.32
CSK-214ENST00000569915 DNMBPQ6XZF7 1577 aa23.28■■□□□ 1.32
CSK-214ENST00000569915 TRIM41Q8WV44 630 aa23.27■■□□□ 1.32
CSK-214ENST00000569915 ABCC8Q09428 1581 aa23.24■■□□□ 1.31
CSK-214ENST00000569915 TARBP1Q13395 1621 aaKnown RBP23.2■■□□□ 1.3
CSK-214ENST00000569915 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
CSK-214ENST00000569915 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
CSK-214ENST00000569915 AQRO60306 1485 aaKnown RBP eCLIP23.17■■□□□ 1.37e-6■■■□□ 17.6
CSK-214ENST00000569915 RAD54L2Q9Y4B4 1467 aa23.12■■□□□ 1.29
CSK-214ENST00000569915 CUX1P39880 1505 aa23.07■■□□□ 1.28
CSK-214ENST00000569915 SOGA1O94964 1423 aa23.05■■□□□ 1.28
CSK-214ENST00000569915 SUPT5HO00267 1087 aaKnown RBP23.04■■□□□ 1.28
CSK-214ENST00000569915 FGD5Q6ZNL6 1462 aa23.04■■□□□ 1.28
CSK-214ENST00000569915 TDRD9Q8NDG6 1382 aaKnown RBP23.03■■□□□ 1.28
CSK-214ENST00000569915 RIMBP3CA6NJZ7 1639 aa23.03■■□□□ 1.28
CSK-214ENST00000569915 RIMBP3BA6NNM3 1639 aa23.03■■□□□ 1.28
CSK-214ENST00000569915 RIMBP3Q9UFD9 1639 aa23.03■■□□□ 1.28
CSK-214ENST00000569915 CHD1O14646 1710 aa22.97■■□□□ 1.27
CSK-214ENST00000569915 ARHGEF11O15085 1522 aa22.97■■□□□ 1.27
CSK-214ENST00000569915 FBLN2P98095 1184 aa22.89■■□□□ 1.25
CSK-214ENST00000569915 SNAPC4Q5SXM2 1469 aa22.89■■□□□ 1.25
CSK-214ENST00000569915 WDR97A6NE52 1622 aa22.86■■□□□ 1.25
CSK-214ENST00000569915 GRIN2BQ13224 1484 aa22.8■■□□□ 1.24
CSK-214ENST00000569915 CYB5RLQ6IPT4 315 aa22.79■■□□□ 1.24
CSK-214ENST00000569915 ARAP1Q96P48 1450 aa22.79■■□□□ 1.24
CSK-214ENST00000569915 MAGI1Q96QZ7 1491 aaPredicted RBP22.78■■□□□ 1.24
CSK-214ENST00000569915 CLASP1Q7Z460 1538 aa22.77■■□□□ 1.24
CSK-214ENST00000569915 ABCA10Q8WWZ4 1543 aa22.77■■□□□ 1.24
CSK-214ENST00000569915 GAPVD1Q14C86 1478 aa22.75■■□□□ 1.23
CSK-214ENST00000569915 CHMP7Q8WUX9 453 aaPredicted RBP22.74■■□□□ 1.23
CSK-214ENST00000569915 ABCA5Q8WWZ7 1642 aa22.73■■□□□ 1.23
CSK-214ENST00000569915 SYNJ2O15056 1496 aa22.73■■□□□ 1.23
CSK-214ENST00000569915 PBRM1Q86U86 1689 aa22.71■■□□□ 1.23
CSK-214ENST00000569915 SYNJ1O43426 1573 aa22.69■■□□□ 1.22
CSK-214ENST00000569915 TOP2BQ02880 1626 aa22.66■■□□□ 1.22
CSK-214ENST00000569915 BIVM-ERCC5R4GMW8 1640 aa22.66■■□□□ 1.22
CSK-214ENST00000569915 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
CSK-214ENST00000569915 ADAMTS12P58397 1594 aa22.54■■□□□ 1.2
CSK-214ENST00000569915 GRIN2AQ12879 1464 aa22.54■■□□□ 1.2
CSK-214ENST00000569915 CEP170Q5SW79 1584 aa22.5■■□□□ 1.19
CSK-214ENST00000569915 ERCC6L2Q5T890 1561 aa22.5■■□□□ 1.19
CSK-214ENST00000569915 NUP160Q12769 1436 aa22.49■■□□□ 1.19
CSK-214ENST00000569915 FHAD1B1AJZ9 1412 aa22.46■■□□□ 1.19
CSK-214ENST00000569915 ERICH3Q5RHP9 1530 aa22.45■■□□□ 1.18
CSK-214ENST00000569915 TRHP20396 242 aaPredicted RBP22.43■■□□□ 1.18
CSK-214ENST00000569915 SHROOM2Q13796 1616 aa22.37■■□□□ 1.17
CSK-214ENST00000569915 IGF1RP08069 1367 aa22.27■■□□□ 1.16
CSK-214ENST00000569915 JPH4Q96JJ6 628 aa22.24■■□□□ 1.15
CSK-214ENST00000569915 PRG4Q92954 1404 aaPredicted RBP22.23■■□□□ 1.15
CSK-214ENST00000569915 RUSC2Q8N2Y8 1516 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms