RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 NISCHQ9Y2I1 1504 aa31.17■■■□□ 2.58
SCAMP2-212ENST00000569904 CCDC180Q9P1Z9 1646 aa28.02■■■□□ 2.08
SCAMP2-212ENST00000569904 ABCC9O60706 1549 aa27.69■■■□□ 2.02
SCAMP2-212ENST00000569904 RB1CC1Q8TDY2 1594 aa26.53■■□□□ 1.84
SCAMP2-212ENST00000569904 NACADO15069 1562 aa26.41■■□□□ 1.82
SCAMP2-212ENST00000569904 MYO15BQ96JP2 1530 aa26.15■■□□□ 1.78
SCAMP2-212ENST00000569904 UNC13AQ9UPW8 1703 aa26.02■■□□□ 1.76
SCAMP2-212ENST00000569904 DCAF8L2P0C7V8 631 aa25.97■■□□□ 1.75
SCAMP2-212ENST00000569904 ZCCHC6Q5VYS8 1495 aaKnown RBP25.88■■□□□ 1.73
SCAMP2-212ENST00000569904 DCAF1Q9Y4B6 1507 aa25.85■■□□□ 1.73
SCAMP2-212ENST00000569904 DNAJC5BQ9UF47 199 aa25.84■■□□□ 1.73
SCAMP2-212ENST00000569904 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
SCAMP2-212ENST00000569904 PABPN1Q86U42 306 aaKnown RBP eCLIP25.72■■□□□ 1.71
SCAMP2-212ENST00000569904 SHROOM4Q9ULL8 1493 aa25.51■■□□□ 1.67
SCAMP2-212ENST00000569904 SCRIBQ14160 1630 aa25.39■■□□□ 1.66
SCAMP2-212ENST00000569904 CC2D2AQ9P2K1 1620 aa25.12■■□□□ 1.61
SCAMP2-212ENST00000569904 EIF4G1Q04637 1599 aaKnown RBP25.1■■□□□ 1.61
SCAMP2-212ENST00000569904 CECR2Q9BXF3 1484 aa24.96■■□□□ 1.59
SCAMP2-212ENST00000569904 NCAPD3P42695 1498 aa24.35■■□□□ 1.49
SCAMP2-212ENST00000569904 SMARCA4P51532 1647 aa24.31■■□□□ 1.48
SCAMP2-212ENST00000569904 ATAD2BQ9ULI0 1458 aa24.26■■□□□ 1.47
SCAMP2-212ENST00000569904 SMARCA2P51531 1590 aa24.23■■□□□ 1.47
SCAMP2-212ENST00000569904 HMGXB3Q12766 1538 aa24.22■■□□□ 1.47
SCAMP2-212ENST00000569904 BAZ1AQ9NRL2 1556 aaPredicted RBP24.2■■□□□ 1.46
SCAMP2-212ENST00000569904 PEG3Q9GZU2 1588 aa24.15■■□□□ 1.46
SCAMP2-212ENST00000569904 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
SCAMP2-212ENST00000569904 MROH2BQ7Z745 1585 aa23.99■■□□□ 1.43
SCAMP2-212ENST00000569904 CUX2O14529 1486 aa23.93■■□□□ 1.42
SCAMP2-212ENST00000569904 ERCC6Q03468 1493 aa23.89■■□□□ 1.42
SCAMP2-212ENST00000569904 NESP48681 1621 aa23.84■■□□□ 1.41
SCAMP2-212ENST00000569904 LAMC3Q9Y6N6 1575 aa23.81■■□□□ 1.4
SCAMP2-212ENST00000569904 WIZO95785 1651 aa23.73■■□□□ 1.39
SCAMP2-212ENST00000569904 THOC2Q8NI27 1593 aaKnown RBP23.69■■□□□ 1.38
SCAMP2-212ENST00000569904 DNAJC5Q9H3Z4 198 aa23.68■■□□□ 1.38
SCAMP2-212ENST00000569904 KIF21AQ7Z4S6 1674 aa23.64■■□□□ 1.37
SCAMP2-212ENST00000569904 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
SCAMP2-212ENST00000569904 CADPSQ9ULU8 1353 aa23.56■■□□□ 1.36
SCAMP2-212ENST00000569904 RSF1Q96T23 1441 aaPredicted RBP23.51■■□□□ 1.35
SCAMP2-212ENST00000569904 TOP2AP11388 1531 aaKnown RBP23.45■■□□□ 1.34
SCAMP2-212ENST00000569904 WDR62O43379 1518 aa23.38■■□□□ 1.33
SCAMP2-212ENST00000569904 MRC2Q9UBG0 1479 aa23.38■■□□□ 1.33
SCAMP2-212ENST00000569904 CFTRP13569 1480 aa23.36■■□□□ 1.33
SCAMP2-212ENST00000569904 CEP164Q9UPV0 1460 aa23.31■■□□□ 1.32
SCAMP2-212ENST00000569904 FANCD2Q9BXW9 1451 aa23.29■■□□□ 1.32
SCAMP2-212ENST00000569904 PRDM2Q13029 1718 aa23.27■■□□□ 1.32
SCAMP2-212ENST00000569904 CCDC88BA6NC98 1476 aa23.13■■□□□ 1.29
SCAMP2-212ENST00000569904 URB2Q14146 1524 aaKnown RBP23.11■■□□□ 1.29
SCAMP2-212ENST00000569904 TOPBP1Q92547 1522 aa22.88■■□□□ 1.25
SCAMP2-212ENST00000569904 ABCC8Q09428 1581 aa22.88■■□□□ 1.25
SCAMP2-212ENST00000569904 IFT140Q96RY7 1462 aa22.85■■□□□ 1.25
SCAMP2-212ENST00000569904 DNMBPQ6XZF7 1577 aa22.84■■□□□ 1.25
SCAMP2-212ENST00000569904 ZNF608Q9ULD9 1512 aaPredicted RBP22.77■■□□□ 1.24
SCAMP2-212ENST00000569904 TARBP1Q13395 1621 aaKnown RBP22.73■■□□□ 1.23
SCAMP2-212ENST00000569904 OSCARQ8IYS5 282 aa22.73■■□□□ 1.23
SCAMP2-212ENST00000569904 EIF4G3O43432 1585 aaKnown RBP22.72■■□□□ 1.23
SCAMP2-212ENST00000569904 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
SCAMP2-212ENST00000569904 WDR97A6NE52 1622 aa22.58■■□□□ 1.21
SCAMP2-212ENST00000569904 AQRO60306 1485 aaKnown RBP eCLIP22.54■■□□□ 1.25e-7■■■□□ 17.7
SCAMP2-212ENST00000569904 TRIM41Q8WV44 630 aa22.54■■□□□ 1.2
SCAMP2-212ENST00000569904 CHD1O14646 1710 aa22.54■■□□□ 1.2
SCAMP2-212ENST00000569904 CUX1P39880 1505 aa22.53■■□□□ 1.2
SCAMP2-212ENST00000569904 RIMBP3CA6NJZ7 1639 aa22.53■■□□□ 1.2
SCAMP2-212ENST00000569904 RIMBP3BA6NNM3 1639 aa22.53■■□□□ 1.2
SCAMP2-212ENST00000569904 RIMBP3Q9UFD9 1639 aa22.53■■□□□ 1.2
SCAMP2-212ENST00000569904 FGD5Q6ZNL6 1462 aa22.51■■□□□ 1.19
SCAMP2-212ENST00000569904 RAD54L2Q9Y4B4 1467 aa22.51■■□□□ 1.19
SCAMP2-212ENST00000569904 SOGA1O94964 1423 aa22.5■■□□□ 1.19
SCAMP2-212ENST00000569904 ARHGEF11O15085 1522 aa22.45■■□□□ 1.18
SCAMP2-212ENST00000569904 TDRD9Q8NDG6 1382 aaKnown RBP22.4■■□□□ 1.18
SCAMP2-212ENST00000569904 SUPT5HO00267 1087 aaKnown RBP22.38■■□□□ 1.17
SCAMP2-212ENST00000569904 MAGI1Q96QZ7 1491 aaPredicted RBP22.36■■□□□ 1.17
SCAMP2-212ENST00000569904 SNAPC4Q5SXM2 1469 aa22.35■■□□□ 1.17
SCAMP2-212ENST00000569904 GRIN2BQ13224 1484 aa22.34■■□□□ 1.17
SCAMP2-212ENST00000569904 PBRM1Q86U86 1689 aa22.33■■□□□ 1.17
SCAMP2-212ENST00000569904 ABCA10Q8WWZ4 1543 aa22.31■■□□□ 1.16
SCAMP2-212ENST00000569904 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
SCAMP2-212ENST00000569904 CLASP1Q7Z460 1538 aa22.3■■□□□ 1.16
SCAMP2-212ENST00000569904 BIVM-ERCC5R4GMW8 1640 aa22.29■■□□□ 1.16
SCAMP2-212ENST00000569904 SYNJ1O43426 1573 aa22.26■■□□□ 1.15
SCAMP2-212ENST00000569904 TOP2BQ02880 1626 aa22.26■■□□□ 1.15
SCAMP2-212ENST00000569904 SYNJ2O15056 1496 aa22.26■■□□□ 1.15
SCAMP2-212ENST00000569904 GAPVD1Q14C86 1478 aa22.26■■□□□ 1.15
SCAMP2-212ENST00000569904 FBLN2P98095 1184 aa22.25■■□□□ 1.15
SCAMP2-212ENST00000569904 ARAP1Q96P48 1450 aa22.22■■□□□ 1.15
SCAMP2-212ENST00000569904 WRNQ14191 1432 aaPredicted RBP eCLIP22.18■■□□□ 1.14
SCAMP2-212ENST00000569904 CHMP7Q8WUX9 453 aaPredicted RBP22.18■■□□□ 1.14
SCAMP2-212ENST00000569904 CYB5RLQ6IPT4 315 aa22.14■■□□□ 1.13
SCAMP2-212ENST00000569904 ADAMTS12P58397 1594 aa22.1■■□□□ 1.13
SCAMP2-212ENST00000569904 GRIN2AQ12879 1464 aa22.06■■□□□ 1.12
SCAMP2-212ENST00000569904 ERICH3Q5RHP9 1530 aa22.06■■□□□ 1.12
SCAMP2-212ENST00000569904 NUP160Q12769 1436 aa22■■□□□ 1.11
SCAMP2-212ENST00000569904 CEP170Q5SW79 1584 aa21.99■■□□□ 1.11
SCAMP2-212ENST00000569904 FHAD1B1AJZ9 1412 aa21.99■■□□□ 1.11
SCAMP2-212ENST00000569904 SHROOM2Q13796 1616 aa21.95■■□□□ 1.1
SCAMP2-212ENST00000569904 ERCC6L2Q5T890 1561 aa21.89■■□□□ 1.09
SCAMP2-212ENST00000569904 TRHP20396 242 aaPredicted RBP21.8■■□□□ 1.08
SCAMP2-212ENST00000569904 RUSC2Q8N2Y8 1516 aa21.8■■□□□ 1.08
SCAMP2-212ENST00000569904 CUL7Q14999 1698 aa21.78■■□□□ 1.08
SCAMP2-212ENST00000569904 KIF27Q86VH2 1401 aa21.73■■□□□ 1.07
SCAMP2-212ENST00000569904 IGF1RP08069 1367 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms