RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 NISCHQ9Y2I1 1504 aa55.69■■■■■ 6.51
RBFOX1-219ENST00000569895 CCDC180Q9P1Z9 1646 aa49.77■■■■■ 5.56
RBFOX1-219ENST00000569895 ABCC9O60706 1549 aa49.51■■■■■ 5.52
RBFOX1-219ENST00000569895 RB1CC1Q8TDY2 1594 aa47.3■■■■■ 5.16
RBFOX1-219ENST00000569895 NACADO15069 1562 aa47.07■■■■■ 5.12
RBFOX1-219ENST00000569895 DCAF8L2P0C7V8 631 aa47.05■■■■■ 5.12
RBFOX1-219ENST00000569895 MYO15BQ96JP2 1530 aa46.54■■■■■ 5.04
RBFOX1-219ENST00000569895 PABPN1Q86U42 306 aaKnown RBP eCLIP46.22■■■■■ 4.99
RBFOX1-219ENST00000569895 ZCCHC6Q5VYS8 1495 aaKnown RBP46.19■■■■■ 4.98
RBFOX1-219ENST00000569895 DNAJC5BQ9UF47 199 aa46.16■■■■■ 4.98
RBFOX1-219ENST00000569895 DCAF1Q9Y4B6 1507 aa46.04■■■■■ 4.96
RBFOX1-219ENST00000569895 UNC13AQ9UPW8 1703 aa46.01■■■■■ 4.96
RBFOX1-219ENST00000569895 BICRAQ9NZM4 1560 aa45.79■■■■■ 4.92
RBFOX1-219ENST00000569895 SCRIBQ14160 1630 aa45.37■■■■■ 4.85
RBFOX1-219ENST00000569895 SHROOM4Q9ULL8 1493 aa45.36■■■■■ 4.85
RBFOX1-219ENST00000569895 CC2D2AQ9P2K1 1620 aa44.71■■■■■ 4.75
RBFOX1-219ENST00000569895 EIF4G1Q04637 1599 aaKnown RBP44.7■■■■■ 4.75
RBFOX1-219ENST00000569895 CECR2Q9BXF3 1484 aa44.6■■■■■ 4.73
RBFOX1-219ENST00000569895 NCAPD3P42695 1498 aa43.47■■■■■ 4.55
RBFOX1-219ENST00000569895 ATAD2BQ9ULI0 1458 aa43.35■■■■■ 4.53
RBFOX1-219ENST00000569895 SMARCA4P51532 1647 aa43.32■■■■■ 4.53
RBFOX1-219ENST00000569895 SMARCA2P51531 1590 aa43.27■■■■■ 4.52
RBFOX1-219ENST00000569895 BAZ1AQ9NRL2 1556 aaPredicted RBP43.23■■■■■ 4.51
RBFOX1-219ENST00000569895 HMGXB3Q12766 1538 aa43.12■■■■■ 4.49
RBFOX1-219ENST00000569895 BAZ1BQ9UIG0 1483 aaKnown RBP42.97■■■■■ 4.47
RBFOX1-219ENST00000569895 PEG3Q9GZU2 1588 aa42.91■■■■■ 4.46
RBFOX1-219ENST00000569895 MROH2BQ7Z745 1585 aa42.87■■■■■ 4.45
RBFOX1-219ENST00000569895 ERCC6Q03468 1493 aa42.81■■■■■ 4.44
RBFOX1-219ENST00000569895 CUX2O14529 1486 aa42.6■■■■■ 4.41
RBFOX1-219ENST00000569895 NESP48681 1621 aa42.58■■■■■ 4.41
RBFOX1-219ENST00000569895 LAMC3Q9Y6N6 1575 aa42.39■■■■■ 4.38
RBFOX1-219ENST00000569895 WIZO95785 1651 aa42.33■■■■■ 4.37
RBFOX1-219ENST00000569895 DNAJC5Q9H3Z4 198 aa42.26■■■■■ 4.36
RBFOX1-219ENST00000569895 PDS5BQ9NTI5 1447 aa42.24■■■■■ 4.35
RBFOX1-219ENST00000569895 CADPSQ9ULU8 1353 aa42.2■■■■■ 4.35
RBFOX1-219ENST00000569895 RSF1Q96T23 1441 aaPredicted RBP42.16■■■■■ 4.34
RBFOX1-219ENST00000569895 THOC2Q8NI27 1593 aaKnown RBP42.03■■■■■ 4.32
RBFOX1-219ENST00000569895 KIF21AQ7Z4S6 1674 aa41.96■■■■■ 4.31
RBFOX1-219ENST00000569895 TOP2AP11388 1531 aaKnown RBP41.88■■■■■ 4.29
RBFOX1-219ENST00000569895 MRC2Q9UBG0 1479 aa41.78■■■■■ 4.28
RBFOX1-219ENST00000569895 CFTRP13569 1480 aa41.73■■■■■ 4.27
RBFOX1-219ENST00000569895 CEP164Q9UPV0 1460 aa41.68■■■■■ 4.26
RBFOX1-219ENST00000569895 FANCD2Q9BXW9 1451 aa41.66■■■■■ 4.26
RBFOX1-219ENST00000569895 WDR62O43379 1518 aa41.61■■■■■ 4.25
RBFOX1-219ENST00000569895 CCDC88BA6NC98 1476 aa41.44■■■■■ 4.22
RBFOX1-219ENST00000569895 URB2Q14146 1524 aaKnown RBP41.24■■■■■ 4.19
RBFOX1-219ENST00000569895 PRDM2Q13029 1718 aa41.18■■■■■ 4.18
RBFOX1-219ENST00000569895 ABCC8Q09428 1581 aa40.94■■■■■ 4.14
RBFOX1-219ENST00000569895 TOPBP1Q92547 1522 aa40.88■■■■■ 4.14
RBFOX1-219ENST00000569895 IFT140Q96RY7 1462 aa40.87■■■■■ 4.13
RBFOX1-219ENST00000569895 OSCARQ8IYS5 282 aa40.83■■■■■ 4.13
RBFOX1-219ENST00000569895 DNMBPQ6XZF7 1577 aa40.75■■■■■ 4.11
RBFOX1-219ENST00000569895 ZNF608Q9ULD9 1512 aaPredicted RBP40.68■■■■■ 4.1
RBFOX1-219ENST00000569895 SUPT5HO00267 1087 aaKnown RBP40.64■■■■■ 4.1
RBFOX1-219ENST00000569895 TRIM41Q8WV44 630 aa40.54■■■■■ 4.08
RBFOX1-219ENST00000569895 POLA1P09884 1462 aaPredicted RBP40.48■■■■■ 4.07
RBFOX1-219ENST00000569895 TARBP1Q13395 1621 aaKnown RBP40.43■■■■■ 4.06
RBFOX1-219ENST00000569895 EIF4G3O43432 1585 aaKnown RBP40.43■■■■■ 4.06
RBFOX1-219ENST00000569895 AQRO60306 1485 aaKnown RBP eCLIP40.41■■■■■ 4.06
RBFOX1-219ENST00000569895 SOGA1O94964 1423 aa40.4■■■■■ 4.06
RBFOX1-219ENST00000569895 RAD54L2Q9Y4B4 1467 aa40.32■■■■■ 4.05
RBFOX1-219ENST00000569895 FGD5Q6ZNL6 1462 aa40.28■■■■■ 4.04
RBFOX1-219ENST00000569895 CUX1P39880 1505 aa40.26■■■■■ 4.03
RBFOX1-219ENST00000569895 TDRD9Q8NDG6 1382 aaKnown RBP40.24■■■■■ 4.03
RBFOX1-219ENST00000569895 FBLN2P98095 1184 aa40.2■■■■■ 4.03
RBFOX1-219ENST00000569895 WDR97A6NE52 1622 aa40.13■■■■■ 4.01
RBFOX1-219ENST00000569895 CHD1O14646 1710 aa40.03■■■■■ 4
RBFOX1-219ENST00000569895 RIMBP3CA6NJZ7 1639 aa40.03■■■■■ 4
RBFOX1-219ENST00000569895 RIMBP3BA6NNM3 1639 aa40.03■■■■■ 4
RBFOX1-219ENST00000569895 RIMBP3Q9UFD9 1639 aa40.03■■■■■ 4
RBFOX1-219ENST00000569895 ARHGEF11O15085 1522 aa39.99■■■■□ 3.99
RBFOX1-219ENST00000569895 SNAPC4Q5SXM2 1469 aa39.99■■■■□ 3.99
RBFOX1-219ENST00000569895 CHMP7Q8WUX9 453 aaPredicted RBP39.98■■■■□ 3.99
RBFOX1-219ENST00000569895 GRIN2BQ13224 1484 aa39.98■■■■□ 3.99
RBFOX1-219ENST00000569895 MAGI1Q96QZ7 1491 aaPredicted RBP39.94■■■■□ 3.98
RBFOX1-219ENST00000569895 GAPVD1Q14C86 1478 aa39.88■■■■□ 3.98
RBFOX1-219ENST00000569895 ABCA10Q8WWZ4 1543 aa39.86■■■■□ 3.97
RBFOX1-219ENST00000569895 WRNQ14191 1432 aaPredicted RBP eCLIP39.84■■■■□ 3.97
RBFOX1-219ENST00000569895 CYB5RLQ6IPT4 315 aa39.81■■■■□ 3.96
RBFOX1-219ENST00000569895 SYNJ2O15056 1496 aa39.8■■■■□ 3.96
RBFOX1-219ENST00000569895 SYNJ1O43426 1573 aa39.72■■■■□ 3.95
RBFOX1-219ENST00000569895 TOP2BQ02880 1626 aa39.72■■■■□ 3.95
RBFOX1-219ENST00000569895 ABCA5Q8WWZ7 1642 aa39.69■■■■□ 3.94
RBFOX1-219ENST00000569895 PBRM1Q86U86 1689 aa39.68■■■■□ 3.94
RBFOX1-219ENST00000569895 BIVM-ERCC5R4GMW8 1640 aa39.68■■■■□ 3.94
RBFOX1-219ENST00000569895 CLASP1Q7Z460 1538 aa39.64■■■■□ 3.94
RBFOX1-219ENST00000569895 ARAP1Q96P48 1450 aa39.6■■■■□ 3.93
RBFOX1-219ENST00000569895 GRIN2AQ12879 1464 aa39.43■■■■□ 3.9
RBFOX1-219ENST00000569895 FHAD1B1AJZ9 1412 aa39.41■■■■□ 3.9
RBFOX1-219ENST00000569895 ERICH3Q5RHP9 1530 aa39.38■■■■□ 3.89
RBFOX1-219ENST00000569895 ADAMTS12P58397 1594 aa39.38■■■■□ 3.89
RBFOX1-219ENST00000569895 TRHP20396 242 aaPredicted RBP39.31■■■■□ 3.88
RBFOX1-219ENST00000569895 NUP160Q12769 1436 aa39.29■■■■□ 3.88
RBFOX1-219ENST00000569895 CEP170Q5SW79 1584 aa39.2■■■■□ 3.87
RBFOX1-219ENST00000569895 KIF27Q86VH2 1401 aa39.07■■■■□ 3.85
RBFOX1-219ENST00000569895 JPH4Q96JJ6 628 aa39.01■■■■□ 3.84
RBFOX1-219ENST00000569895 ERCC6L2Q5T890 1561 aa39■■■■□ 3.83
RBFOX1-219ENST00000569895 IGF1RP08069 1367 aa39■■■■□ 3.83
RBFOX1-219ENST00000569895 SHROOM2Q13796 1616 aa39■■■■□ 3.83
RBFOX1-219ENST00000569895 PRG4Q92954 1404 aaPredicted RBP38.92■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms