RNA–Protein interactions for RNA: ENST00000569889.1

RBFOX1-218, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5

Gene RBFOX1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-218ENST00000569889 NISCHQ9Y2I1 1504 aa30.54■■■□□ 2.48
RBFOX1-218ENST00000569889 ABCC9O60706 1549 aa27.56■■■□□ 2
RBFOX1-218ENST00000569889 CCDC180Q9P1Z9 1646 aa27.34■■□□□ 1.97
RBFOX1-218ENST00000569889 DCAF8L2P0C7V8 631 aa26.16■■□□□ 1.78
RBFOX1-218ENST00000569889 RB1CC1Q8TDY2 1594 aa26.09■■□□□ 1.77
RBFOX1-218ENST00000569889 DNAJC5BQ9UF47 199 aa26.01■■□□□ 1.75
RBFOX1-218ENST00000569889 NACADO15069 1562 aa25.86■■□□□ 1.73
RBFOX1-218ENST00000569889 PABPN1Q86U42 306 aaKnown RBP eCLIP25.75■■□□□ 1.71
RBFOX1-218ENST00000569889 UNC13AQ9UPW8 1703 aa25.57■■□□□ 1.68
RBFOX1-218ENST00000569889 MYO15BQ96JP2 1530 aa25.36■■□□□ 1.65
RBFOX1-218ENST00000569889 BICRAQ9NZM4 1560 aa25.31■■□□□ 1.64
RBFOX1-218ENST00000569889 ZCCHC6Q5VYS8 1495 aaKnown RBP25.27■■□□□ 1.64
RBFOX1-218ENST00000569889 SCRIBQ14160 1630 aa25.11■■□□□ 1.61
RBFOX1-218ENST00000569889 DCAF1Q9Y4B6 1507 aa25.08■■□□□ 1.61
RBFOX1-218ENST00000569889 CC2D2AQ9P2K1 1620 aa24.82■■□□□ 1.56
RBFOX1-218ENST00000569889 SHROOM4Q9ULL8 1493 aa24.78■■□□□ 1.56
RBFOX1-218ENST00000569889 CECR2Q9BXF3 1484 aa24.75■■□□□ 1.55
RBFOX1-218ENST00000569889 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
RBFOX1-218ENST00000569889 DNAJC5Q9H3Z4 198 aa24.06■■□□□ 1.44
RBFOX1-218ENST00000569889 NCAPD3P42695 1498 aa23.87■■□□□ 1.41
RBFOX1-218ENST00000569889 ATAD2BQ9ULI0 1458 aa23.86■■□□□ 1.41
RBFOX1-218ENST00000569889 SMARCA4P51532 1647 aa23.84■■□□□ 1.41
RBFOX1-218ENST00000569889 ERCC6Q03468 1493 aa23.79■■□□□ 1.4
RBFOX1-218ENST00000569889 SMARCA2P51531 1590 aa23.77■■□□□ 1.4
RBFOX1-218ENST00000569889 BAZ1AQ9NRL2 1556 aaPredicted RBP23.69■■□□□ 1.38
RBFOX1-218ENST00000569889 BAZ1BQ9UIG0 1483 aaKnown RBP23.67■■□□□ 1.38
RBFOX1-218ENST00000569889 HMGXB3Q12766 1538 aa23.66■■□□□ 1.38
RBFOX1-218ENST00000569889 NESP48681 1621 aa23.66■■□□□ 1.38
RBFOX1-218ENST00000569889 MROH2BQ7Z745 1585 aa23.6■■□□□ 1.37
RBFOX1-218ENST00000569889 CUX2O14529 1486 aa23.57■■□□□ 1.36
RBFOX1-218ENST00000569889 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
RBFOX1-218ENST00000569889 WIZO95785 1651 aa23.37■■□□□ 1.33
RBFOX1-218ENST00000569889 LAMC3Q9Y6N6 1575 aa23.35■■□□□ 1.33
RBFOX1-218ENST00000569889 KIF21AQ7Z4S6 1674 aa23.33■■□□□ 1.33
RBFOX1-218ENST00000569889 THOC2Q8NI27 1593 aaKnown RBP23.29■■□□□ 1.32
RBFOX1-218ENST00000569889 PDS5BQ9NTI5 1447 aa23.26■■□□□ 1.31
RBFOX1-218ENST00000569889 CADPSQ9ULU8 1353 aa23.21■■□□□ 1.31
RBFOX1-218ENST00000569889 RSF1Q96T23 1441 aaPredicted RBP23.08■■□□□ 1.29
RBFOX1-218ENST00000569889 MRC2Q9UBG0 1479 aa23.06■■□□□ 1.28
RBFOX1-218ENST00000569889 CEP164Q9UPV0 1460 aa22.99■■□□□ 1.27
RBFOX1-218ENST00000569889 FANCD2Q9BXW9 1451 aa22.98■■□□□ 1.27
RBFOX1-218ENST00000569889 TOP2AP11388 1531 aaKnown RBP22.97■■□□□ 1.27
RBFOX1-218ENST00000569889 WDR62O43379 1518 aa22.95■■□□□ 1.26
RBFOX1-218ENST00000569889 TRIM41Q8WV44 630 aa22.9■■□□□ 1.26
RBFOX1-218ENST00000569889 CFTRP13569 1480 aa22.9■■□□□ 1.26
RBFOX1-218ENST00000569889 URB2Q14146 1524 aaKnown RBP22.78■■□□□ 1.24
RBFOX1-218ENST00000569889 CCDC88BA6NC98 1476 aa22.77■■□□□ 1.24
RBFOX1-218ENST00000569889 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
RBFOX1-218ENST00000569889 OSCARQ8IYS5 282 aa22.65■■□□□ 1.22
RBFOX1-218ENST00000569889 ZNF608Q9ULD9 1512 aaPredicted RBP22.54■■□□□ 1.2
RBFOX1-218ENST00000569889 TOPBP1Q92547 1522 aa22.53■■□□□ 1.2
RBFOX1-218ENST00000569889 IFT140Q96RY7 1462 aa22.51■■□□□ 1.19
RBFOX1-218ENST00000569889 ABCC8Q09428 1581 aa22.42■■□□□ 1.18
RBFOX1-218ENST00000569889 DNMBPQ6XZF7 1577 aa22.42■■□□□ 1.18
RBFOX1-218ENST00000569889 FBLN2P98095 1184 aa22.39■■□□□ 1.17
RBFOX1-218ENST00000569889 AQRO60306 1485 aaKnown RBP eCLIP22.37■■□□□ 1.17
RBFOX1-218ENST00000569889 EIF4G3O43432 1585 aaKnown RBP22.37■■□□□ 1.17
RBFOX1-218ENST00000569889 SUPT5HO00267 1087 aaKnown RBP22.36■■□□□ 1.17
RBFOX1-218ENST00000569889 RIMBP3CA6NJZ7 1639 aa22.31■■□□□ 1.16
RBFOX1-218ENST00000569889 RIMBP3BA6NNM3 1639 aa22.31■■□□□ 1.16
RBFOX1-218ENST00000569889 RIMBP3Q9UFD9 1639 aa22.31■■□□□ 1.16
RBFOX1-218ENST00000569889 RAD54L2Q9Y4B4 1467 aa22.31■■□□□ 1.16
RBFOX1-218ENST00000569889 POLA1P09884 1462 aaPredicted RBP22.29■■□□□ 1.16
RBFOX1-218ENST00000569889 TARBP1Q13395 1621 aaKnown RBP22.29■■□□□ 1.16
RBFOX1-218ENST00000569889 CHD1O14646 1710 aa22.28■■□□□ 1.16
RBFOX1-218ENST00000569889 TDRD9Q8NDG6 1382 aaKnown RBP22.26■■□□□ 1.15
RBFOX1-218ENST00000569889 SOGA1O94964 1423 aa22.26■■□□□ 1.15
RBFOX1-218ENST00000569889 CYB5RLQ6IPT4 315 aa22.22■■□□□ 1.15
RBFOX1-218ENST00000569889 ARHGEF11O15085 1522 aa22.21■■□□□ 1.15
RBFOX1-218ENST00000569889 FGD5Q6ZNL6 1462 aa22.2■■□□□ 1.14
RBFOX1-218ENST00000569889 CUX1P39880 1505 aa22.16■■□□□ 1.14
RBFOX1-218ENST00000569889 CHMP7Q8WUX9 453 aaPredicted RBP22.12■■□□□ 1.13
RBFOX1-218ENST00000569889 SNAPC4Q5SXM2 1469 aa22.1■■□□□ 1.13
RBFOX1-218ENST00000569889 TRHP20396 242 aaPredicted RBP22.04■■□□□ 1.12
RBFOX1-218ENST00000569889 GRIN2BQ13224 1484 aa22■■□□□ 1.11
RBFOX1-218ENST00000569889 ARAP1Q96P48 1450 aa21.99■■□□□ 1.11
RBFOX1-218ENST00000569889 PBRM1Q86U86 1689 aa21.96■■□□□ 1.11
RBFOX1-218ENST00000569889 GAPVD1Q14C86 1478 aa21.96■■□□□ 1.11
RBFOX1-218ENST00000569889 MAGI1Q96QZ7 1491 aaPredicted RBP21.96■■□□□ 1.11
RBFOX1-218ENST00000569889 WDR97A6NE52 1622 aa21.95■■□□□ 1.1
RBFOX1-218ENST00000569889 SYNJ1O43426 1573 aa21.94■■□□□ 1.1
RBFOX1-218ENST00000569889 SYNJ2O15056 1496 aa21.91■■□□□ 1.1
RBFOX1-218ENST00000569889 CLASP1Q7Z460 1538 aa21.89■■□□□ 1.09
RBFOX1-218ENST00000569889 ABCA10Q8WWZ4 1543 aa21.86■■□□□ 1.09
RBFOX1-218ENST00000569889 WRNQ14191 1432 aaPredicted RBP eCLIP21.83■■□□□ 1.09
RBFOX1-218ENST00000569889 ABCA5Q8WWZ7 1642 aa21.83■■□□□ 1.08
RBFOX1-218ENST00000569889 TOP2BQ02880 1626 aa21.76■■□□□ 1.07
RBFOX1-218ENST00000569889 BIVM-ERCC5R4GMW8 1640 aa21.76■■□□□ 1.07
RBFOX1-218ENST00000569889 GRIN2AQ12879 1464 aa21.71■■□□□ 1.07
RBFOX1-218ENST00000569889 ADAMTS12P58397 1594 aa21.7■■□□□ 1.06
RBFOX1-218ENST00000569889 ERCC6L2Q5T890 1561 aa21.67■■□□□ 1.06
RBFOX1-218ENST00000569889 CEP170Q5SW79 1584 aa21.66■■□□□ 1.06
RBFOX1-218ENST00000569889 FHAD1B1AJZ9 1412 aa21.64■■□□□ 1.06
RBFOX1-218ENST00000569889 NUP160Q12769 1436 aa21.59■■□□□ 1.05
RBFOX1-218ENST00000569889 ERICH3Q5RHP9 1530 aa21.58■■□□□ 1.04
RBFOX1-218ENST00000569889 JPH4Q96JJ6 628 aa21.52■■□□□ 1.04
RBFOX1-218ENST00000569889 AEBP2Q6ZN18 517 aaPredicted RBP21.51■■□□□ 1.03
RBFOX1-218ENST00000569889 PRG4Q92954 1404 aaPredicted RBP21.5■■□□□ 1.03
RBFOX1-218ENST00000569889 SHROOM2Q13796 1616 aa21.48■■□□□ 1.03
RBFOX1-218ENST00000569889 TTBK1Q5TCY1 1321 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms