RNA–Protein interactions for RNA: ENST00000569887.1

MVP-216, Transcript of major vault protein, humanhuman

TSL 5

Gene MVP, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVP-216ENST00000569887 NISCHQ9Y2I1 1504 aa49.65■■■■■ 5.54
MVP-216ENST00000569887 CCDC180Q9P1Z9 1646 aa44.37■■■■■ 4.69
MVP-216ENST00000569887 ABCC9O60706 1549 aa43.67■■■■■ 4.58
MVP-216ENST00000569887 RB1CC1Q8TDY2 1594 aa41.96■■■■■ 4.31
MVP-216ENST00000569887 NACADO15069 1562 aa41.83■■■■■ 4.29
MVP-216ENST00000569887 DCAF8L2P0C7V8 631 aa41.6■■■■■ 4.25
MVP-216ENST00000569887 MYO15BQ96JP2 1530 aa41.52■■■■■ 4.24
MVP-216ENST00000569887 ZCCHC6Q5VYS8 1495 aaKnown RBP41.28■■■■■ 4.2
MVP-216ENST00000569887 DCAF1Q9Y4B6 1507 aa41.16■■■■■ 4.18
MVP-216ENST00000569887 UNC13AQ9UPW8 1703 aa40.87■■■■■ 4.13
MVP-216ENST00000569887 PABPN1Q86U42 306 aaKnown RBP eCLIP40.72■■■■■ 4.11
MVP-216ENST00000569887 BICRAQ9NZM4 1560 aa40.59■■■■■ 4.09
MVP-216ENST00000569887 DNAJC5BQ9UF47 199 aa40.37■■■■■ 4.05
MVP-216ENST00000569887 SHROOM4Q9ULL8 1493 aa40.35■■■■■ 4.05
MVP-216ENST00000569887 SCRIBQ14160 1630 aa40.33■■■■■ 4.05
MVP-216ENST00000569887 EIF4G1Q04637 1599 aaKnown RBP39.6■■■■□ 3.93
MVP-216ENST00000569887 CC2D2AQ9P2K1 1620 aa39.51■■■■□ 3.91
MVP-216ENST00000569887 CECR2Q9BXF3 1484 aa39.34■■■■□ 3.89
MVP-216ENST00000569887 SMARCA4P51532 1647 aa38.6■■■■□ 3.77
MVP-216ENST00000569887 NCAPD3P42695 1498 aa38.59■■■■□ 3.77
MVP-216ENST00000569887 BAZ1AQ9NRL2 1556 aaPredicted RBP38.57■■■■□ 3.76
MVP-216ENST00000569887 SMARCA2P51531 1590 aa38.51■■■■□ 3.76
MVP-216ENST00000569887 ATAD2BQ9ULI0 1458 aa38.5■■■■□ 3.75
MVP-216ENST00000569887 HMGXB3Q12766 1538 aa38.37■■■■□ 3.73
MVP-216ENST00000569887 PEG3Q9GZU2 1588 aa38.28■■■■□ 3.72
MVP-216ENST00000569887 MROH2BQ7Z745 1585 aa38.2■■■■□ 3.71
MVP-216ENST00000569887 BAZ1BQ9UIG0 1483 aaKnown RBP38.19■■■■□ 3.7
MVP-216ENST00000569887 ERCC6Q03468 1493 aa37.76■■■■□ 3.63
MVP-216ENST00000569887 WIZO95785 1651 aa37.75■■■■□ 3.63
MVP-216ENST00000569887 RSF1Q96T23 1441 aaPredicted RBP37.67■■■■□ 3.62
MVP-216ENST00000569887 NESP48681 1621 aa37.64■■■■□ 3.62
MVP-216ENST00000569887 LAMC3Q9Y6N6 1575 aa37.63■■■■□ 3.62
MVP-216ENST00000569887 CUX2O14529 1486 aa37.54■■■■□ 3.6
MVP-216ENST00000569887 CADPSQ9ULU8 1353 aa37.43■■■■□ 3.58
MVP-216ENST00000569887 PDS5BQ9NTI5 1447 aa37.43■■■■□ 3.58
MVP-216ENST00000569887 TOP2AP11388 1531 aaKnown RBP37.41■■■■□ 3.58
MVP-216ENST00000569887 KIF21AQ7Z4S6 1674 aa37.21■■■■□ 3.55
MVP-216ENST00000569887 THOC2Q8NI27 1593 aaKnown RBP37.21■■■■□ 3.55
MVP-216ENST00000569887 CFTRP13569 1480 aa37.12■■■■□ 3.53
MVP-216ENST00000569887 MRC2Q9UBG0 1479 aa37.01■■■■□ 3.51
MVP-216ENST00000569887 CEP164Q9UPV0 1460 aa36.99■■■■□ 3.51
MVP-216ENST00000569887 FANCD2Q9BXW9 1451 aa36.98■■■■□ 3.51
MVP-216ENST00000569887 CCDC88BA6NC98 1476 aa36.94■■■■□ 3.5
MVP-216ENST00000569887 WDR62O43379 1518 aa36.89■■■■□ 3.5
MVP-216ENST00000569887 DNAJC5Q9H3Z4 198 aa36.81■■■■□ 3.48
MVP-216ENST00000569887 PRDM2Q13029 1718 aa36.79■■■■□ 3.48
MVP-216ENST00000569887 URB2Q14146 1524 aaKnown RBP36.58■■■■□ 3.45
MVP-216ENST00000569887 ABCC8Q09428 1581 aa36.43■■■■□ 3.42
MVP-216ENST00000569887 SUPT5HO00267 1087 aaKnown RBP36.38■■■■□ 3.41
MVP-216ENST00000569887 TOPBP1Q92547 1522 aa36.33■■■■□ 3.41
MVP-216ENST00000569887 DNMBPQ6XZF7 1577 aa36.27■■■■□ 3.4
MVP-216ENST00000569887 IFT140Q96RY7 1462 aa36.25■■■■□ 3.39
MVP-216ENST00000569887 ZNF608Q9ULD9 1512 aaPredicted RBP36■■■■□ 3.35
MVP-216ENST00000569887 POLA1P09884 1462 aaPredicted RBP35.99■■■■□ 3.35
MVP-216ENST00000569887 TARBP1Q13395 1621 aaKnown RBP35.94■■■■□ 3.34
MVP-216ENST00000569887 OSCARQ8IYS5 282 aa35.92■■■■□ 3.34
MVP-216ENST00000569887 EIF4G3O43432 1585 aaKnown RBP35.89■■■■□ 3.34
MVP-216ENST00000569887 CUX1P39880 1505 aa35.87■■■■□ 3.33
MVP-216ENST00000569887 SOGA1O94964 1423 aa35.86■■■■□ 3.33
MVP-216ENST00000569887 FGD5Q6ZNL6 1462 aa35.84■■■■□ 3.33
MVP-216ENST00000569887 WDR97A6NE52 1622 aa35.78■■■■□ 3.32
MVP-216ENST00000569887 AQRO60306 1485 aaKnown RBP eCLIP35.78■■■■□ 3.326e-8■■■■■ 42.1
MVP-216ENST00000569887 RAD54L2Q9Y4B4 1467 aa35.78■■■■□ 3.32
MVP-216ENST00000569887 TDRD9Q8NDG6 1382 aaKnown RBP35.66■■■■□ 3.3
MVP-216ENST00000569887 WRNQ14191 1432 aaPredicted RBP eCLIP35.57■■■■□ 3.28
MVP-216ENST00000569887 TOP2BQ02880 1626 aa35.52■■■■□ 3.28
MVP-216ENST00000569887 GRIN2BQ13224 1484 aa35.52■■■■□ 3.28
MVP-216ENST00000569887 ABCA10Q8WWZ4 1543 aa35.52■■■■□ 3.28
MVP-216ENST00000569887 BIVM-ERCC5R4GMW8 1640 aa35.5■■■■□ 3.27
MVP-216ENST00000569887 MAGI1Q96QZ7 1491 aaPredicted RBP35.48■■■■□ 3.27
MVP-216ENST00000569887 CHD1O14646 1710 aa35.48■■■■□ 3.27
MVP-216ENST00000569887 FBLN2P98095 1184 aa35.46■■■■□ 3.27
MVP-216ENST00000569887 SNAPC4Q5SXM2 1469 aa35.45■■■■□ 3.27
MVP-216ENST00000569887 GAPVD1Q14C86 1478 aa35.44■■■■□ 3.26
MVP-216ENST00000569887 SYNJ1O43426 1573 aa35.4■■■■□ 3.26
MVP-216ENST00000569887 ABCA5Q8WWZ7 1642 aa35.36■■■■□ 3.25
MVP-216ENST00000569887 CHMP7Q8WUX9 453 aaPredicted RBP35.36■■■■□ 3.25
MVP-216ENST00000569887 PBRM1Q86U86 1689 aa35.34■■■■□ 3.25
MVP-216ENST00000569887 TRIM41Q8WV44 630 aa35.34■■■■□ 3.25
MVP-216ENST00000569887 SYNJ2O15056 1496 aa35.33■■■■□ 3.25
MVP-216ENST00000569887 RIMBP3CA6NJZ7 1639 aa35.28■■■■□ 3.24
MVP-216ENST00000569887 RIMBP3BA6NNM3 1639 aa35.28■■■■□ 3.24
MVP-216ENST00000569887 RIMBP3Q9UFD9 1639 aa35.28■■■■□ 3.24
MVP-216ENST00000569887 ARHGEF11O15085 1522 aa35.27■■■■□ 3.24
MVP-216ENST00000569887 CLASP1Q7Z460 1538 aa35.13■■■■□ 3.21
MVP-216ENST00000569887 ERICH3Q5RHP9 1530 aa35.11■■■■□ 3.21
MVP-216ENST00000569887 ADAMTS12P58397 1594 aa35.05■■■■□ 3.2
MVP-216ENST00000569887 FHAD1B1AJZ9 1412 aa35.05■■■■□ 3.2
MVP-216ENST00000569887 GRIN2AQ12879 1464 aa35.03■■■■□ 3.2
MVP-216ENST00000569887 CYB5RLQ6IPT4 315 aa34.95■■■■□ 3.19
MVP-216ENST00000569887 ARAP1Q96P48 1450 aa34.92■■■■□ 3.18
MVP-216ENST00000569887 NUP160Q12769 1436 aa34.89■■■■□ 3.18
MVP-216ENST00000569887 KIF27Q86VH2 1401 aa34.89■■■■□ 3.18
MVP-216ENST00000569887 CEP170Q5SW79 1584 aa34.81■■■■□ 3.16
MVP-216ENST00000569887 IGF1RP08069 1367 aa34.74■■■■□ 3.15
MVP-216ENST00000569887 CUL7Q14999 1698 aa34.71■■■■□ 3.15
MVP-216ENST00000569887 SHROOM2Q13796 1616 aa34.66■■■■□ 3.14
MVP-216ENST00000569887 CARMIL1Q5VZK9 1371 aa34.55■■■■□ 3.12
MVP-216ENST00000569887 JPH4Q96JJ6 628 aa34.55■■■■□ 3.12
MVP-216ENST00000569887 RUSC2Q8N2Y8 1516 aa34.54■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms