RNA–Protein interactions for RNA: ENST00000569876.1

LDHD-204, Transcript of lactate dehydrogenase D, humanhuman

TSL 5

Gene LDHD, Length 701 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHD-204ENST00000569876 NISCHQ9Y2I1 1504 aa37.71■■■■□ 3.63
LDHD-204ENST00000569876 ABCC9O60706 1549 aa34.37■■■■□ 3.09
LDHD-204ENST00000569876 CCDC180Q9P1Z9 1646 aa33.99■■■■□ 3.03
LDHD-204ENST00000569876 DNAJC5BQ9UF47 199 aa32.63■■■□□ 2.81
LDHD-204ENST00000569876 RB1CC1Q8TDY2 1594 aa32.57■■■□□ 2.8
LDHD-204ENST00000569876 NACADO15069 1562 aa32.27■■■□□ 2.76
LDHD-204ENST00000569876 DCAF8L2P0C7V8 631 aa31.98■■■□□ 2.71
LDHD-204ENST00000569876 PABPN1Q86U42 306 aaKnown RBP eCLIP31.95■■■□□ 2.71
LDHD-204ENST00000569876 MYO15BQ96JP2 1530 aa31.74■■■□□ 2.67
LDHD-204ENST00000569876 UNC13AQ9UPW8 1703 aa31.73■■■□□ 2.67
LDHD-204ENST00000569876 BICRAQ9NZM4 1560 aa31.61■■■□□ 2.65
LDHD-204ENST00000569876 SHROOM4Q9ULL8 1493 aa31.23■■■□□ 2.59
LDHD-204ENST00000569876 DCAF1Q9Y4B6 1507 aa31.16■■■□□ 2.58
LDHD-204ENST00000569876 ZCCHC6Q5VYS8 1495 aaKnown RBP31.15■■■□□ 2.58
LDHD-204ENST00000569876 CECR2Q9BXF3 1484 aa31.04■■■□□ 2.56
LDHD-204ENST00000569876 CC2D2AQ9P2K1 1620 aa31.02■■■□□ 2.56
LDHD-204ENST00000569876 SCRIBQ14160 1630 aa30.89■■■□□ 2.54
LDHD-204ENST00000569876 EIF4G1Q04637 1599 aaKnown RBP30.88■■■□□ 2.53
LDHD-204ENST00000569876 DNAJC5Q9H3Z4 198 aa30.32■■■□□ 2.44
LDHD-204ENST00000569876 CUX2O14529 1486 aa29.85■■■□□ 2.37
LDHD-204ENST00000569876 NCAPD3P42695 1498 aa29.82■■■□□ 2.36
LDHD-204ENST00000569876 ERCC6Q03468 1493 aa29.73■■■□□ 2.35
LDHD-204ENST00000569876 ATAD2BQ9ULI0 1458 aa29.63■■■□□ 2.33
LDHD-204ENST00000569876 SMARCA2P51531 1590 aa29.54■■■□□ 2.32
LDHD-204ENST00000569876 HMGXB3Q12766 1538 aa29.53■■■□□ 2.32
LDHD-204ENST00000569876 SMARCA4P51532 1647 aa29.46■■■□□ 2.31
LDHD-204ENST00000569876 NESP48681 1621 aa29.4■■■□□ 2.3
LDHD-204ENST00000569876 BAZ1BQ9UIG0 1483 aaKnown RBP29.31■■■□□ 2.28
LDHD-204ENST00000569876 BAZ1AQ9NRL2 1556 aaPredicted RBP29.3■■■□□ 2.28
LDHD-204ENST00000569876 PEG3Q9GZU2 1588 aa29.23■■■□□ 2.27
LDHD-204ENST00000569876 THOC2Q8NI27 1593 aaKnown RBP29.18■■■□□ 2.26
LDHD-204ENST00000569876 LAMC3Q9Y6N6 1575 aa29.18■■■□□ 2.26
LDHD-204ENST00000569876 PDS5BQ9NTI5 1447 aa29.05■■■□□ 2.24
LDHD-204ENST00000569876 MROH2BQ7Z745 1585 aa29.02■■■□□ 2.24
LDHD-204ENST00000569876 KIF21AQ7Z4S6 1674 aa28.97■■■□□ 2.23
LDHD-204ENST00000569876 CADPSQ9ULU8 1353 aa28.88■■■□□ 2.21
LDHD-204ENST00000569876 MRC2Q9UBG0 1479 aa28.79■■■□□ 2.2
LDHD-204ENST00000569876 TRIM41Q8WV44 630 aa28.75■■■□□ 2.19
LDHD-204ENST00000569876 WDR62O43379 1518 aa28.73■■■□□ 2.19
LDHD-204ENST00000569876 WIZO95785 1651 aa28.61■■■□□ 2.17
LDHD-204ENST00000569876 CEP164Q9UPV0 1460 aa28.59■■■□□ 2.17
LDHD-204ENST00000569876 FANCD2Q9BXW9 1451 aa28.53■■■□□ 2.16
LDHD-204ENST00000569876 CFTRP13569 1480 aa28.46■■■□□ 2.15
LDHD-204ENST00000569876 OSCARQ8IYS5 282 aa28.44■■■□□ 2.14
LDHD-204ENST00000569876 URB2Q14146 1524 aaKnown RBP28.3■■■□□ 2.12
LDHD-204ENST00000569876 RSF1Q96T23 1441 aaPredicted RBP28.3■■■□□ 2.12
LDHD-204ENST00000569876 TOP2AP11388 1531 aaKnown RBP28.28■■■□□ 2.12
LDHD-204ENST00000569876 IFT140Q96RY7 1462 aa28.06■■■□□ 2.08
LDHD-204ENST00000569876 PRDM2Q13029 1718 aa28.04■■■□□ 2.08
LDHD-204ENST00000569876 RIMBP3CA6NJZ7 1639 aa28.03■■■□□ 2.08
LDHD-204ENST00000569876 RIMBP3BA6NNM3 1639 aa28.03■■■□□ 2.08
LDHD-204ENST00000569876 RIMBP3Q9UFD9 1639 aa28.03■■■□□ 2.08
LDHD-204ENST00000569876 ZNF608Q9ULD9 1512 aaPredicted RBP28.02■■■□□ 2.08
LDHD-204ENST00000569876 CCDC88BA6NC98 1476 aa27.96■■■□□ 2.07
LDHD-204ENST00000569876 ARHGEF11O15085 1522 aa27.93■■■□□ 2.06
LDHD-204ENST00000569876 TOPBP1Q92547 1522 aa27.93■■■□□ 2.06
LDHD-204ENST00000569876 ABCC8Q09428 1581 aa27.9■■■□□ 2.06
LDHD-204ENST00000569876 EIF4G3O43432 1585 aaKnown RBP27.82■■■□□ 2.04
LDHD-204ENST00000569876 DNMBPQ6XZF7 1577 aa27.79■■■□□ 2.04
LDHD-204ENST00000569876 CYB5RLQ6IPT4 315 aa27.77■■■□□ 2.04
LDHD-204ENST00000569876 AQRO60306 1485 aaKnown RBP eCLIP27.72■■■□□ 2.03
LDHD-204ENST00000569876 TARBP1Q13395 1621 aaKnown RBP27.7■■■□□ 2.03
LDHD-204ENST00000569876 CHD1O14646 1710 aa27.65■■■□□ 2.02
LDHD-204ENST00000569876 FBLN2P98095 1184 aa27.63■■■□□ 2.01
LDHD-204ENST00000569876 POLA1P09884 1462 aaPredicted RBP27.63■■■□□ 2.01
LDHD-204ENST00000569876 ARAP1Q96P48 1450 aa27.63■■■□□ 2.01
LDHD-204ENST00000569876 TRHP20396 242 aaPredicted RBP27.58■■■□□ 2.01
LDHD-204ENST00000569876 SOGA1O94964 1423 aa27.51■■□□□ 1.99
LDHD-204ENST00000569876 RAD54L2Q9Y4B4 1467 aa27.51■■□□□ 1.99
LDHD-204ENST00000569876 TDRD9Q8NDG6 1382 aaKnown RBP27.5■■□□□ 1.99
LDHD-204ENST00000569876 WDR97A6NE52 1622 aa27.44■■□□□ 1.98
LDHD-204ENST00000569876 SNAPC4Q5SXM2 1469 aa27.42■■□□□ 1.98
LDHD-204ENST00000569876 CHMP7Q8WUX9 453 aaPredicted RBP27.39■■□□□ 1.98
LDHD-204ENST00000569876 CLASP1Q7Z460 1538 aa27.39■■□□□ 1.98
LDHD-204ENST00000569876 FGD5Q6ZNL6 1462 aa27.38■■□□□ 1.97
LDHD-204ENST00000569876 MAGI1Q96QZ7 1491 aaPredicted RBP27.37■■□□□ 1.97
LDHD-204ENST00000569876 SYNJ1O43426 1573 aa27.35■■□□□ 1.97
LDHD-204ENST00000569876 GRIN2BQ13224 1484 aa27.32■■□□□ 1.96
LDHD-204ENST00000569876 CUX1P39880 1505 aa27.29■■□□□ 1.96
LDHD-204ENST00000569876 SYNJ2O15056 1496 aa27.28■■□□□ 1.96
LDHD-204ENST00000569876 GAPVD1Q14C86 1478 aa27.16■■□□□ 1.94
LDHD-204ENST00000569876 PBRM1Q86U86 1689 aa27.1■■□□□ 1.93
LDHD-204ENST00000569876 AEBP2Q6ZN18 517 aaPredicted RBP27.09■■□□□ 1.93
LDHD-204ENST00000569876 ABCA10Q8WWZ4 1543 aa27.08■■□□□ 1.93
LDHD-204ENST00000569876 ABCA5Q8WWZ7 1642 aa27.04■■□□□ 1.92
LDHD-204ENST00000569876 GRIN2AQ12879 1464 aa26.96■■□□□ 1.91
LDHD-204ENST00000569876 WRNQ14191 1432 aaPredicted RBP eCLIP26.91■■□□□ 1.9
LDHD-204ENST00000569876 NUP160Q12769 1436 aa26.9■■□□□ 1.9
LDHD-204ENST00000569876 ERCC6L2Q5T890 1561 aa26.89■■□□□ 1.9
LDHD-204ENST00000569876 CEP170Q5SW79 1584 aa26.86■■□□□ 1.89
LDHD-204ENST00000569876 ADAMTS12P58397 1594 aa26.85■■□□□ 1.89
LDHD-204ENST00000569876 FHAD1B1AJZ9 1412 aa26.82■■□□□ 1.88
LDHD-204ENST00000569876 SHROOM2Q13796 1616 aa26.79■■□□□ 1.88
LDHD-204ENST00000569876 TOP2BQ02880 1626 aa26.76■■□□□ 1.87
LDHD-204ENST00000569876 BIVM-ERCC5R4GMW8 1640 aa26.73■■□□□ 1.87
LDHD-204ENST00000569876 ERICH3Q5RHP9 1530 aa26.73■■□□□ 1.87
LDHD-204ENST00000569876 SUPT5HO00267 1087 aaKnown RBP26.71■■□□□ 1.87
LDHD-204ENST00000569876 PRG4Q92954 1404 aaPredicted RBP26.66■■□□□ 1.86
LDHD-204ENST00000569876 JPH4Q96JJ6 628 aa26.64■■□□□ 1.86
LDHD-204ENST00000569876 KIF13AQ9H1H9 1805 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms