RNA–Protein interactions for RNA: ENST00000569829.1

RPAP1-212, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-212ENST00000569829 NISCHQ9Y2I1 1504 aa25.84■■□□□ 1.73
RPAP1-212ENST00000569829 ABCC9O60706 1549 aa23.8■■□□□ 1.4
RPAP1-212ENST00000569829 CCDC180Q9P1Z9 1646 aa23.23■■□□□ 1.31
RPAP1-212ENST00000569829 DNAJC5BQ9UF47 199 aa22.77■■□□□ 1.24
RPAP1-212ENST00000569829 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.16
RPAP1-212ENST00000569829 PABPN1Q86U42 306 aaKnown RBP eCLIP22.18■■□□□ 1.14
RPAP1-212ENST00000569829 DCAF8L2P0C7V8 631 aa22.12■■□□□ 1.13
RPAP1-212ENST00000569829 NACADO15069 1562 aa22.07■■□□□ 1.12
RPAP1-212ENST00000569829 UNC13AQ9UPW8 1703 aa21.94■■□□□ 1.1
RPAP1-212ENST00000569829 BICRAQ9NZM4 1560 aa21.82■■□□□ 1.08
RPAP1-212ENST00000569829 MYO15BQ96JP2 1530 aa21.58■■□□□ 1.04
RPAP1-212ENST00000569829 CC2D2AQ9P2K1 1620 aa21.42■■□□□ 1.02
RPAP1-212ENST00000569829 CECR2Q9BXF3 1484 aa21.41■■□□□ 1.02
RPAP1-212ENST00000569829 ZCCHC6Q5VYS8 1495 aaKnown RBP21.32■■□□□ 1
RPAP1-212ENST00000569829 SCRIBQ14160 1630 aa21.32■■□□□ 1
RPAP1-212ENST00000569829 EIF4G1Q04637 1599 aaKnown RBP21.27■□□□□ 0.99
RPAP1-212ENST00000569829 SHROOM4Q9ULL8 1493 aa21.23■□□□□ 0.99
RPAP1-212ENST00000569829 DCAF1Q9Y4B6 1507 aa21.2■□□□□ 0.98
RPAP1-212ENST00000569829 DNAJC5Q9H3Z4 198 aa21.01■□□□□ 0.95
RPAP1-212ENST00000569829 CUX2O14529 1486 aa20.5■□□□□ 0.87
RPAP1-212ENST00000569829 ERCC6Q03468 1493 aa20.49■□□□□ 0.87
RPAP1-212ENST00000569829 NCAPD3P42695 1498 aa20.43■□□□□ 0.86
RPAP1-212ENST00000569829 NESP48681 1621 aa20.38■□□□□ 0.85
RPAP1-212ENST00000569829 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
RPAP1-212ENST00000569829 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
RPAP1-212ENST00000569829 HMGXB3Q12766 1538 aa20.2■□□□□ 0.82
RPAP1-212ENST00000569829 SMARCA2P51531 1590 aa20.19■□□□□ 0.82
RPAP1-212ENST00000569829 THOC2Q8NI27 1593 aaKnown RBP20.13■□□□□ 0.81
RPAP1-212ENST00000569829 BAZ1BQ9UIG0 1483 aaKnown RBP20.11■□□□□ 0.81
RPAP1-212ENST00000569829 TRIM41Q8WV44 630 aa20.04■□□□□ 0.8
RPAP1-212ENST00000569829 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
RPAP1-212ENST00000569829 BAZ1AQ9NRL2 1556 aaPredicted RBP20.02■□□□□ 0.8
RPAP1-212ENST00000569829 MROH2BQ7Z745 1585 aa19.99■□□□□ 0.79
RPAP1-212ENST00000569829 LAMC3Q9Y6N6 1575 aa19.99■□□□□ 0.79
RPAP1-212ENST00000569829 PEG3Q9GZU2 1588 aa19.97■□□□□ 0.79
RPAP1-212ENST00000569829 PDS5BQ9NTI5 1447 aa19.89■□□□□ 0.77
RPAP1-212ENST00000569829 CADPSQ9ULU8 1353 aa19.82■□□□□ 0.76
RPAP1-212ENST00000569829 MRC2Q9UBG0 1479 aa19.78■□□□□ 0.76
RPAP1-212ENST00000569829 WDR62O43379 1518 aa19.75■□□□□ 0.75
RPAP1-212ENST00000569829 WIZO95785 1651 aa19.73■□□□□ 0.75
RPAP1-212ENST00000569829 CEP164Q9UPV0 1460 aa19.63■□□□□ 0.73
RPAP1-212ENST00000569829 FANCD2Q9BXW9 1451 aa19.6■□□□□ 0.73
RPAP1-212ENST00000569829 OSCARQ8IYS5 282 aa19.57■□□□□ 0.72
RPAP1-212ENST00000569829 URB2Q14146 1524 aaKnown RBP19.51■□□□□ 0.71
RPAP1-212ENST00000569829 CFTRP13569 1480 aa19.5■□□□□ 0.71
RPAP1-212ENST00000569829 RSF1Q96T23 1441 aaPredicted RBP19.41■□□□□ 0.7
RPAP1-212ENST00000569829 RIMBP3CA6NJZ7 1639 aa19.4■□□□□ 0.7
RPAP1-212ENST00000569829 RIMBP3BA6NNM3 1639 aa19.4■□□□□ 0.7
RPAP1-212ENST00000569829 RIMBP3Q9UFD9 1639 aa19.4■□□□□ 0.7
RPAP1-212ENST00000569829 ZNF608Q9ULD9 1512 aaPredicted RBP19.38■□□□□ 0.69
RPAP1-212ENST00000569829 TOP2AP11388 1531 aaKnown RBP19.35■□□□□ 0.69
RPAP1-212ENST00000569829 ARHGEF11O15085 1522 aa19.29■□□□□ 0.68
RPAP1-212ENST00000569829 CYB5RLQ6IPT4 315 aa19.24■□□□□ 0.67
RPAP1-212ENST00000569829 IFT140Q96RY7 1462 aa19.23■□□□□ 0.67
RPAP1-212ENST00000569829 CCDC88BA6NC98 1476 aa19.22■□□□□ 0.67
RPAP1-212ENST00000569829 PRDM2Q13029 1718 aa19.21■□□□□ 0.67
RPAP1-212ENST00000569829 TOPBP1Q92547 1522 aa19.2■□□□□ 0.66
RPAP1-212ENST00000569829 EIF4G3O43432 1585 aaKnown RBP19.16■□□□□ 0.66
RPAP1-212ENST00000569829 AQRO60306 1485 aaKnown RBP eCLIP19.15■□□□□ 0.666e-6■■■■□ 25.1
RPAP1-212ENST00000569829 TRHP20396 242 aaPredicted RBP19.12■□□□□ 0.65
RPAP1-212ENST00000569829 CHD1O14646 1710 aa19.11■□□□□ 0.65
RPAP1-212ENST00000569829 ARAP1Q96P48 1450 aa19.1■□□□□ 0.65
RPAP1-212ENST00000569829 FBLN2P98095 1184 aa19.1■□□□□ 0.65
RPAP1-212ENST00000569829 TARBP1Q13395 1621 aaKnown RBP19.06■□□□□ 0.64
RPAP1-212ENST00000569829 DNMBPQ6XZF7 1577 aa19.06■□□□□ 0.64
RPAP1-212ENST00000569829 RAD54L2Q9Y4B4 1467 aa19.02■□□□□ 0.63
RPAP1-212ENST00000569829 POLA1P09884 1462 aaPredicted RBP19■□□□□ 0.63
RPAP1-212ENST00000569829 ABCC8Q09428 1581 aa18.99■□□□□ 0.63
RPAP1-212ENST00000569829 TDRD9Q8NDG6 1382 aaKnown RBP18.97■□□□□ 0.63
RPAP1-212ENST00000569829 SOGA1O94964 1423 aa18.9■□□□□ 0.62
RPAP1-212ENST00000569829 SNAPC4Q5SXM2 1469 aa18.9■□□□□ 0.62
RPAP1-212ENST00000569829 CLASP1Q7Z460 1538 aa18.85■□□□□ 0.61
RPAP1-212ENST00000569829 FGD5Q6ZNL6 1462 aa18.84■□□□□ 0.61
RPAP1-212ENST00000569829 CHMP7Q8WUX9 453 aaPredicted RBP18.83■□□□□ 0.6
RPAP1-212ENST00000569829 AEBP2Q6ZN18 517 aaPredicted RBP18.77■□□□□ 0.6
RPAP1-212ENST00000569829 CUX1P39880 1505 aa18.77■□□□□ 0.6
RPAP1-212ENST00000569829 SYNJ1O43426 1573 aa18.76■□□□□ 0.59
RPAP1-212ENST00000569829 GRIN2BQ13224 1484 aa18.72■□□□□ 0.59
RPAP1-212ENST00000569829 MAGI1Q96QZ7 1491 aaPredicted RBP18.72■□□□□ 0.59
RPAP1-212ENST00000569829 SYNJ2O15056 1496 aa18.71■□□□□ 0.59
RPAP1-212ENST00000569829 GAPVD1Q14C86 1478 aa18.7■□□□□ 0.58
RPAP1-212ENST00000569829 ERCC6L2Q5T890 1561 aa18.67■□□□□ 0.58
RPAP1-212ENST00000569829 WDR97A6NE52 1622 aa18.67■□□□□ 0.58
RPAP1-212ENST00000569829 PBRM1Q86U86 1689 aa18.65■□□□□ 0.58
RPAP1-212ENST00000569829 ABCA5Q8WWZ7 1642 aa18.56■□□□□ 0.56
RPAP1-212ENST00000569829 ABCA10Q8WWZ4 1543 aa18.54■□□□□ 0.56
RPAP1-212ENST00000569829 CEP170Q5SW79 1584 aa18.51■□□□□ 0.55
RPAP1-212ENST00000569829 GRIN2AQ12879 1464 aa18.51■□□□□ 0.55
RPAP1-212ENST00000569829 NUP160Q12769 1436 aa18.45■□□□□ 0.54
RPAP1-212ENST00000569829 ADAMTS12P58397 1594 aa18.45■□□□□ 0.54
RPAP1-212ENST00000569829 KIF13AQ9H1H9 1805 aa18.41■□□□□ 0.54
RPAP1-212ENST00000569829 SHROOM2Q13796 1616 aa18.39■□□□□ 0.53
RPAP1-212ENST00000569829 SUPT5HO00267 1087 aaKnown RBP18.39■□□□□ 0.53
RPAP1-212ENST00000569829 WRNQ14191 1432 aaPredicted RBP eCLIP18.38■□□□□ 0.53
RPAP1-212ENST00000569829 FHAD1B1AJZ9 1412 aa18.36■□□□□ 0.53
RPAP1-212ENST00000569829 PRG4Q92954 1404 aaPredicted RBP18.34■□□□□ 0.53
RPAP1-212ENST00000569829 JPH4Q96JJ6 628 aa18.31■□□□□ 0.52
RPAP1-212ENST00000569829 TOP2BQ02880 1626 aa18.31■□□□□ 0.52
RPAP1-212ENST00000569829 FAM69CQ0P6D2 419 aa18.3■□□□□ 0.52
RPAP1-212ENST00000569829 BIVM-ERCC5R4GMW8 1640 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms