RNA–Protein interactions for RNA: ENST00000569804.2

LPCAT4-208, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-208ENST00000569804 NISCHQ9Y2I1 1504 aa27.65■■■□□ 2.02
LPCAT4-208ENST00000569804 ABCC9O60706 1549 aa25.17■■□□□ 1.62
LPCAT4-208ENST00000569804 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
LPCAT4-208ENST00000569804 DNAJC5BQ9UF47 199 aa23.89■■□□□ 1.41
LPCAT4-208ENST00000569804 RB1CC1Q8TDY2 1594 aa23.86■■□□□ 1.41
LPCAT4-208ENST00000569804 NACADO15069 1562 aa23.64■■□□□ 1.37
LPCAT4-208ENST00000569804 UNC13AQ9UPW8 1703 aa23.44■■□□□ 1.34
LPCAT4-208ENST00000569804 PABPN1Q86U42 306 aaKnown RBP eCLIP23.32■■□□□ 1.32
LPCAT4-208ENST00000569804 BICRAQ9NZM4 1560 aa23.27■■□□□ 1.32
LPCAT4-208ENST00000569804 MYO15BQ96JP2 1530 aa23.27■■□□□ 1.32
LPCAT4-208ENST00000569804 DCAF8L2P0C7V8 631 aa23.19■■□□□ 1.3
LPCAT4-208ENST00000569804 ZCCHC6Q5VYS8 1495 aaKnown RBP22.9■■□□□ 1.26
LPCAT4-208ENST00000569804 SHROOM4Q9ULL8 1493 aa22.89■■□□□ 1.25
LPCAT4-208ENST00000569804 DCAF1Q9Y4B6 1507 aa22.86■■□□□ 1.25
LPCAT4-208ENST00000569804 CC2D2AQ9P2K1 1620 aa22.78■■□□□ 1.24
LPCAT4-208ENST00000569804 CECR2Q9BXF3 1484 aa22.71■■□□□ 1.23
LPCAT4-208ENST00000569804 SCRIBQ14160 1630 aa22.7■■□□□ 1.22
LPCAT4-208ENST00000569804 EIF4G1Q04637 1599 aaKnown RBP22.67■■□□□ 1.22
LPCAT4-208ENST00000569804 DNAJC5Q9H3Z4 198 aa22.09■■□□□ 1.13
LPCAT4-208ENST00000569804 CUX2O14529 1486 aa21.84■■□□□ 1.09
LPCAT4-208ENST00000569804 NCAPD3P42695 1498 aa21.83■■□□□ 1.08
LPCAT4-208ENST00000569804 ATAD2BQ9ULI0 1458 aa21.72■■□□□ 1.07
LPCAT4-208ENST00000569804 ERCC6Q03468 1493 aa21.7■■□□□ 1.06
LPCAT4-208ENST00000569804 HMGXB3Q12766 1538 aa21.68■■□□□ 1.06
LPCAT4-208ENST00000569804 SMARCA4P51532 1647 aa21.66■■□□□ 1.06
LPCAT4-208ENST00000569804 SMARCA2P51531 1590 aa21.62■■□□□ 1.05
LPCAT4-208ENST00000569804 NESP48681 1621 aa21.58■■□□□ 1.05
LPCAT4-208ENST00000569804 THOC2Q8NI27 1593 aaKnown RBP21.5■■□□□ 1.03
LPCAT4-208ENST00000569804 PEG3Q9GZU2 1588 aa21.49■■□□□ 1.03
LPCAT4-208ENST00000569804 BAZ1AQ9NRL2 1556 aaPredicted RBP21.47■■□□□ 1.03
LPCAT4-208ENST00000569804 BAZ1BQ9UIG0 1483 aaKnown RBP21.45■■□□□ 1.03
LPCAT4-208ENST00000569804 LAMC3Q9Y6N6 1575 aa21.39■■□□□ 1.01
LPCAT4-208ENST00000569804 KIF21AQ7Z4S6 1674 aa21.34■■□□□ 1.01
LPCAT4-208ENST00000569804 MROH2BQ7Z745 1585 aa21.31■■□□□ 1
LPCAT4-208ENST00000569804 PDS5BQ9NTI5 1447 aa21.19■□□□□ 0.98
LPCAT4-208ENST00000569804 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
LPCAT4-208ENST00000569804 WDR62O43379 1518 aa21.1■□□□□ 0.97
LPCAT4-208ENST00000569804 MRC2Q9UBG0 1479 aa21.08■□□□□ 0.97
LPCAT4-208ENST00000569804 WIZO95785 1651 aa21.05■□□□□ 0.96
LPCAT4-208ENST00000569804 CEP164Q9UPV0 1460 aa20.93■□□□□ 0.94
LPCAT4-208ENST00000569804 TRIM41Q8WV44 630 aa20.91■□□□□ 0.94
LPCAT4-208ENST00000569804 FANCD2Q9BXW9 1451 aa20.88■□□□□ 0.93
LPCAT4-208ENST00000569804 CFTRP13569 1480 aa20.86■□□□□ 0.93
LPCAT4-208ENST00000569804 URB2Q14146 1524 aaKnown RBP20.78■□□□□ 0.92
LPCAT4-208ENST00000569804 TOP2AP11388 1531 aaKnown RBP20.76■□□□□ 0.91
LPCAT4-208ENST00000569804 RSF1Q96T23 1441 aaPredicted RBP20.74■□□□□ 0.91
LPCAT4-208ENST00000569804 PRDM2Q13029 1718 aa20.69■□□□□ 0.9
LPCAT4-208ENST00000569804 OSCARQ8IYS5 282 aa20.66■□□□□ 0.9
LPCAT4-208ENST00000569804 RIMBP3CA6NJZ7 1639 aa20.59■□□□□ 0.89
LPCAT4-208ENST00000569804 RIMBP3BA6NNM3 1639 aa20.59■□□□□ 0.89
LPCAT4-208ENST00000569804 RIMBP3Q9UFD9 1639 aa20.59■□□□□ 0.89
LPCAT4-208ENST00000569804 ZNF608Q9ULD9 1512 aaPredicted RBP20.56■□□□□ 0.88
LPCAT4-208ENST00000569804 IFT140Q96RY7 1462 aa20.52■□□□□ 0.88
LPCAT4-208ENST00000569804 CCDC88BA6NC98 1476 aa20.49■□□□□ 0.87
LPCAT4-208ENST00000569804 ARHGEF11O15085 1522 aa20.48■□□□□ 0.87
LPCAT4-208ENST00000569804 TOPBP1Q92547 1522 aa20.48■□□□□ 0.87
LPCAT4-208ENST00000569804 EIF4G3O43432 1585 aaKnown RBP20.46■□□□□ 0.87
LPCAT4-208ENST00000569804 DNMBPQ6XZF7 1577 aa20.39■□□□□ 0.85
LPCAT4-208ENST00000569804 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
LPCAT4-208ENST00000569804 CHD1O14646 1710 aa20.36■□□□□ 0.85
LPCAT4-208ENST00000569804 ABCC8Q09428 1581 aa20.35■□□□□ 0.85
LPCAT4-208ENST00000569804 AQRO60306 1485 aaKnown RBP eCLIP20.28■□□□□ 0.84
LPCAT4-208ENST00000569804 ARAP1Q96P48 1450 aa20.28■□□□□ 0.84
LPCAT4-208ENST00000569804 POLA1P09884 1462 aaPredicted RBP20.26■□□□□ 0.83
LPCAT4-208ENST00000569804 CYB5RLQ6IPT4 315 aa20.19■□□□□ 0.82
LPCAT4-208ENST00000569804 RAD54L2Q9Y4B4 1467 aa20.17■□□□□ 0.82
LPCAT4-208ENST00000569804 CLASP1Q7Z460 1538 aa20.15■□□□□ 0.82
LPCAT4-208ENST00000569804 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
LPCAT4-208ENST00000569804 SNAPC4Q5SXM2 1469 aa20.1■□□□□ 0.81
LPCAT4-208ENST00000569804 TDRD9Q8NDG6 1382 aaKnown RBP20.08■□□□□ 0.81
LPCAT4-208ENST00000569804 FGD5Q6ZNL6 1462 aa20.08■□□□□ 0.81
LPCAT4-208ENST00000569804 SOGA1O94964 1423 aa20.07■□□□□ 0.8
LPCAT4-208ENST00000569804 FBLN2P98095 1184 aa20.05■□□□□ 0.8
LPCAT4-208ENST00000569804 CUX1P39880 1505 aa20.05■□□□□ 0.8
LPCAT4-208ENST00000569804 MAGI1Q96QZ7 1491 aaPredicted RBP20.03■□□□□ 0.8
LPCAT4-208ENST00000569804 SYNJ1O43426 1573 aa20.02■□□□□ 0.8
LPCAT4-208ENST00000569804 TRHP20396 242 aaPredicted RBP20■□□□□ 0.79
LPCAT4-208ENST00000569804 GRIN2BQ13224 1484 aa19.97■□□□□ 0.79
LPCAT4-208ENST00000569804 SYNJ2O15056 1496 aa19.96■□□□□ 0.79
LPCAT4-208ENST00000569804 PBRM1Q86U86 1689 aa19.95■□□□□ 0.78
LPCAT4-208ENST00000569804 ABCA5Q8WWZ7 1642 aa19.9■□□□□ 0.78
LPCAT4-208ENST00000569804 CHMP7Q8WUX9 453 aaPredicted RBP19.89■□□□□ 0.77
LPCAT4-208ENST00000569804 GAPVD1Q14C86 1478 aa19.86■□□□□ 0.77
LPCAT4-208ENST00000569804 ABCA10Q8WWZ4 1543 aa19.85■□□□□ 0.77
LPCAT4-208ENST00000569804 ERCC6L2Q5T890 1561 aa19.8■□□□□ 0.76
LPCAT4-208ENST00000569804 ADAMTS12P58397 1594 aa19.76■□□□□ 0.75
LPCAT4-208ENST00000569804 GRIN2AQ12879 1464 aa19.75■□□□□ 0.75
LPCAT4-208ENST00000569804 CEP170Q5SW79 1584 aa19.74■□□□□ 0.75
LPCAT4-208ENST00000569804 NUP160Q12769 1436 aa19.73■□□□□ 0.75
LPCAT4-208ENST00000569804 SHROOM2Q13796 1616 aa19.72■□□□□ 0.75
LPCAT4-208ENST00000569804 BIVM-ERCC5R4GMW8 1640 aa19.67■□□□□ 0.74
LPCAT4-208ENST00000569804 TOP2BQ02880 1626 aa19.65■□□□□ 0.74
LPCAT4-208ENST00000569804 WRNQ14191 1432 aaPredicted RBP eCLIP19.63■□□□□ 0.73
LPCAT4-208ENST00000569804 KIF13AQ9H1H9 1805 aa19.61■□□□□ 0.73
LPCAT4-208ENST00000569804 FHAD1B1AJZ9 1412 aa19.59■□□□□ 0.73
LPCAT4-208ENST00000569804 AEBP2Q6ZN18 517 aaPredicted RBP19.59■□□□□ 0.73
LPCAT4-208ENST00000569804 ERICH3Q5RHP9 1530 aa19.59■□□□□ 0.73
LPCAT4-208ENST00000569804 RUSC2Q8N2Y8 1516 aa19.5■□□□□ 0.71
LPCAT4-208ENST00000569804 PRG4Q92954 1404 aaPredicted RBP19.48■□□□□ 0.71
LPCAT4-208ENST00000569804 SUPT5HO00267 1087 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms