RNA–Protein interactions for RNA: ENST00000569783.1

CDH11-218, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 539 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-218ENST00000569783 NISCHQ9Y2I1 1504 aa48.33■■■■■ 5.33
CDH11-218ENST00000569783 ABCC9O60706 1549 aa43.39■■■■■ 4.54
CDH11-218ENST00000569783 CCDC180Q9P1Z9 1646 aa43.33■■■■■ 4.53
CDH11-218ENST00000569783 RB1CC1Q8TDY2 1594 aa41.31■■■■■ 4.2
CDH11-218ENST00000569783 NACADO15069 1562 aa41.03■■■■■ 4.16
CDH11-218ENST00000569783 DCAF8L2P0C7V8 631 aa40.94■■■■■ 4.14
CDH11-218ENST00000569783 DNAJC5BQ9UF47 199 aa40.65■■■■■ 4.1
CDH11-218ENST00000569783 MYO15BQ96JP2 1530 aa40.45■■■■■ 4.07
CDH11-218ENST00000569783 PABPN1Q86U42 306 aaKnown RBP eCLIP40.43■■■■■ 4.06
CDH11-218ENST00000569783 UNC13AQ9UPW8 1703 aa40.23■■■■■ 4.03
CDH11-218ENST00000569783 ZCCHC6Q5VYS8 1495 aaKnown RBP40.04■■■■■ 4
CDH11-218ENST00000569783 BICRAQ9NZM4 1560 aa40.01■■■■□ 3.99
CDH11-218ENST00000569783 DCAF1Q9Y4B6 1507 aa39.92■■■■□ 3.98
CDH11-218ENST00000569783 SHROOM4Q9ULL8 1493 aa39.57■■■■□ 3.93
CDH11-218ENST00000569783 SCRIBQ14160 1630 aa39.51■■■■□ 3.92
CDH11-218ENST00000569783 CC2D2AQ9P2K1 1620 aa39.16■■■■□ 3.86
CDH11-218ENST00000569783 CECR2Q9BXF3 1484 aa39.1■■■■□ 3.85
CDH11-218ENST00000569783 EIF4G1Q04637 1599 aaKnown RBP39.08■■■■□ 3.85
CDH11-218ENST00000569783 NCAPD3P42695 1498 aa37.88■■■■□ 3.65
CDH11-218ENST00000569783 ATAD2BQ9ULI0 1458 aa37.75■■■■□ 3.63
CDH11-218ENST00000569783 SMARCA4P51532 1647 aa37.68■■■■□ 3.62
CDH11-218ENST00000569783 SMARCA2P51531 1590 aa37.67■■■■□ 3.62
CDH11-218ENST00000569783 HMGXB3Q12766 1538 aa37.57■■■■□ 3.61
CDH11-218ENST00000569783 BAZ1AQ9NRL2 1556 aaPredicted RBP37.55■■■■□ 3.6
CDH11-218ENST00000569783 ERCC6Q03468 1493 aa37.53■■■■□ 3.6
CDH11-218ENST00000569783 CUX2O14529 1486 aa37.42■■■■□ 3.58
CDH11-218ENST00000569783 BAZ1BQ9UIG0 1483 aaKnown RBP37.42■■■■□ 3.58
CDH11-218ENST00000569783 DNAJC5Q9H3Z4 198 aa37.4■■■■□ 3.58
CDH11-218ENST00000569783 PEG3Q9GZU2 1588 aa37.31■■■■□ 3.56
CDH11-218ENST00000569783 NESP48681 1621 aa37.24■■■■□ 3.55
CDH11-218ENST00000569783 MROH2BQ7Z745 1585 aa37.22■■■■□ 3.55
CDH11-218ENST00000569783 LAMC3Q9Y6N6 1575 aa37.02■■■■□ 3.52
CDH11-218ENST00000569783 PDS5BQ9NTI5 1447 aa36.87■■■■□ 3.49
CDH11-218ENST00000569783 THOC2Q8NI27 1593 aaKnown RBP36.83■■■■□ 3.49
CDH11-218ENST00000569783 WIZO95785 1651 aa36.76■■■■□ 3.47
CDH11-218ENST00000569783 CADPSQ9ULU8 1353 aa36.76■■■■□ 3.47
CDH11-218ENST00000569783 KIF21AQ7Z4S6 1674 aa36.72■■■■□ 3.47
CDH11-218ENST00000569783 MRC2Q9UBG0 1479 aa36.5■■■■□ 3.43
CDH11-218ENST00000569783 RSF1Q96T23 1441 aaPredicted RBP36.48■■■■□ 3.43
CDH11-218ENST00000569783 CEP164Q9UPV0 1460 aa36.37■■■■□ 3.41
CDH11-218ENST00000569783 WDR62O43379 1518 aa36.37■■■■□ 3.41
CDH11-218ENST00000569783 TOP2AP11388 1531 aaKnown RBP36.34■■■■□ 3.41
CDH11-218ENST00000569783 FANCD2Q9BXW9 1451 aa36.32■■■■□ 3.41
CDH11-218ENST00000569783 CFTRP13569 1480 aa36.31■■■■□ 3.4
CDH11-218ENST00000569783 URB2Q14146 1524 aaKnown RBP35.97■■■■□ 3.35
CDH11-218ENST00000569783 CCDC88BA6NC98 1476 aa35.92■■■■□ 3.34
CDH11-218ENST00000569783 PRDM2Q13029 1718 aa35.86■■■■□ 3.33
CDH11-218ENST00000569783 TRIM41Q8WV44 630 aa35.82■■■■□ 3.32
CDH11-218ENST00000569783 OSCARQ8IYS5 282 aa35.77■■■■□ 3.32
CDH11-218ENST00000569783 IFT140Q96RY7 1462 aa35.65■■■■□ 3.3
CDH11-218ENST00000569783 TOPBP1Q92547 1522 aa35.61■■■■□ 3.29
CDH11-218ENST00000569783 ABCC8Q09428 1581 aa35.59■■■■□ 3.29
CDH11-218ENST00000569783 ZNF608Q9ULD9 1512 aaPredicted RBP35.53■■■■□ 3.28
CDH11-218ENST00000569783 DNMBPQ6XZF7 1577 aa35.47■■■■□ 3.27
CDH11-218ENST00000569783 EIF4G3O43432 1585 aaKnown RBP35.33■■■■□ 3.25
CDH11-218ENST00000569783 AQRO60306 1485 aaKnown RBP eCLIP35.25■■■■□ 3.23
CDH11-218ENST00000569783 POLA1P09884 1462 aaPredicted RBP35.25■■■■□ 3.23
CDH11-218ENST00000569783 TARBP1Q13395 1621 aaKnown RBP35.24■■■■□ 3.23
CDH11-218ENST00000569783 RIMBP3CA6NJZ7 1639 aa35.19■■■■□ 3.22
CDH11-218ENST00000569783 RIMBP3BA6NNM3 1639 aa35.19■■■■□ 3.22
CDH11-218ENST00000569783 RIMBP3Q9UFD9 1639 aa35.19■■■■□ 3.22
CDH11-218ENST00000569783 SOGA1O94964 1423 aa35.15■■■■□ 3.22
CDH11-218ENST00000569783 RAD54L2Q9Y4B4 1467 aa35.11■■■■□ 3.21
CDH11-218ENST00000569783 FBLN2P98095 1184 aa35.11■■■■□ 3.21
CDH11-218ENST00000569783 ARHGEF11O15085 1522 aa35.11■■■■□ 3.21
CDH11-218ENST00000569783 TDRD9Q8NDG6 1382 aaKnown RBP35.05■■■■□ 3.2
CDH11-218ENST00000569783 CHD1O14646 1710 aa35.03■■■■□ 3.2
CDH11-218ENST00000569783 FGD5Q6ZNL6 1462 aa35.03■■■■□ 3.2
CDH11-218ENST00000569783 CUX1P39880 1505 aa34.97■■■■□ 3.19
CDH11-218ENST00000569783 SUPT5HO00267 1087 aaKnown RBP34.96■■■■□ 3.19
CDH11-218ENST00000569783 WDR97A6NE52 1622 aa34.95■■■■□ 3.18
CDH11-218ENST00000569783 CYB5RLQ6IPT4 315 aa34.93■■■■□ 3.18
CDH11-218ENST00000569783 SNAPC4Q5SXM2 1469 aa34.89■■■■□ 3.18
CDH11-218ENST00000569783 CHMP7Q8WUX9 453 aaPredicted RBP34.85■■■■□ 3.17
CDH11-218ENST00000569783 GRIN2BQ13224 1484 aa34.82■■■■□ 3.16
CDH11-218ENST00000569783 MAGI1Q96QZ7 1491 aaPredicted RBP34.81■■■■□ 3.16
CDH11-218ENST00000569783 ARAP1Q96P48 1450 aa34.75■■■■□ 3.15
CDH11-218ENST00000569783 SYNJ1O43426 1573 aa34.71■■■■□ 3.15
CDH11-218ENST00000569783 SYNJ2O15056 1496 aa34.7■■■■□ 3.15
CDH11-218ENST00000569783 GAPVD1Q14C86 1478 aa34.7■■■■□ 3.15
CDH11-218ENST00000569783 CLASP1Q7Z460 1538 aa34.65■■■■□ 3.14
CDH11-218ENST00000569783 ABCA10Q8WWZ4 1543 aa34.64■■■■□ 3.14
CDH11-218ENST00000569783 PBRM1Q86U86 1689 aa34.6■■■■□ 3.13
CDH11-218ENST00000569783 TRHP20396 242 aaPredicted RBP34.59■■■■□ 3.13
CDH11-218ENST00000569783 WRNQ14191 1432 aaPredicted RBP eCLIP34.55■■■■□ 3.12
CDH11-218ENST00000569783 ABCA5Q8WWZ7 1642 aa34.54■■■■□ 3.12
CDH11-218ENST00000569783 TOP2BQ02880 1626 aa34.42■■■■□ 3.1
CDH11-218ENST00000569783 BIVM-ERCC5R4GMW8 1640 aa34.4■■■■□ 3.1
CDH11-218ENST00000569783 GRIN2AQ12879 1464 aa34.35■■■■□ 3.09
CDH11-218ENST00000569783 ADAMTS12P58397 1594 aa34.29■■■■□ 3.08
CDH11-218ENST00000569783 FHAD1B1AJZ9 1412 aa34.27■■■■□ 3.08
CDH11-218ENST00000569783 NUP160Q12769 1436 aa34.22■■■■□ 3.07
CDH11-218ENST00000569783 ERICH3Q5RHP9 1530 aa34.21■■■■□ 3.07
CDH11-218ENST00000569783 CEP170Q5SW79 1584 aa34.19■■■■□ 3.06
CDH11-218ENST00000569783 ERCC6L2Q5T890 1561 aa34.1■■■■□ 3.05
CDH11-218ENST00000569783 SHROOM2Q13796 1616 aa34.02■■■■□ 3.04
CDH11-218ENST00000569783 JPH4Q96JJ6 628 aa33.94■■■■□ 3.02
CDH11-218ENST00000569783 PRG4Q92954 1404 aaPredicted RBP33.94■■■■□ 3.02
CDH11-218ENST00000569783 KIF27Q86VH2 1401 aa33.84■■■■□ 3.01
CDH11-218ENST00000569783 RUSC2Q8N2Y8 1516 aa33.8■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms