RNA–Protein interactions for RNA: ENST00000569769.1

SPSB3-212, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 580 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-212ENST00000569769 NISCHQ9Y2I1 1504 aa31.03■■■□□ 2.56
SPSB3-212ENST00000569769 CCDC180Q9P1Z9 1646 aa27.84■■■□□ 2.05
SPSB3-212ENST00000569769 ABCC9O60706 1549 aa27.8■■■□□ 2.04
SPSB3-212ENST00000569769 RB1CC1Q8TDY2 1594 aa26.44■■□□□ 1.82
SPSB3-212ENST00000569769 NACADO15069 1562 aa26.24■■□□□ 1.79
SPSB3-212ENST00000569769 DCAF8L2P0C7V8 631 aa26.19■■□□□ 1.78
SPSB3-212ENST00000569769 UNC13AQ9UPW8 1703 aa26.02■■□□□ 1.76
SPSB3-212ENST00000569769 DNAJC5BQ9UF47 199 aa25.99■■□□□ 1.75
SPSB3-212ENST00000569769 PABPN1Q86U42 306 aaKnown RBP eCLIP25.88■■□□□ 1.73
SPSB3-212ENST00000569769 MYO15BQ96JP2 1530 aa25.84■■□□□ 1.73
SPSB3-212ENST00000569769 ZCCHC6Q5VYS8 1495 aaKnown RBP25.73■■□□□ 1.71
SPSB3-212ENST00000569769 BICRAQ9NZM4 1560 aa25.72■■□□□ 1.71
SPSB3-212ENST00000569769 DCAF1Q9Y4B6 1507 aa25.57■■□□□ 1.68
SPSB3-212ENST00000569769 SCRIBQ14160 1630 aa25.45■■□□□ 1.66
SPSB3-212ENST00000569769 SHROOM4Q9ULL8 1493 aa25.22■■□□□ 1.63
SPSB3-212ENST00000569769 CC2D2AQ9P2K1 1620 aa25.12■■□□□ 1.61
SPSB3-212ENST00000569769 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
SPSB3-212ENST00000569769 CECR2Q9BXF3 1484 aa24.99■■□□□ 1.59
SPSB3-212ENST00000569769 SMARCA4P51532 1647 aa24.24■■□□□ 1.47
SPSB3-212ENST00000569769 NCAPD3P42695 1498 aa24.2■■□□□ 1.47
SPSB3-212ENST00000569769 ATAD2BQ9ULI0 1458 aa24.19■■□□□ 1.46
SPSB3-212ENST00000569769 SMARCA2P51531 1590 aa24.11■■□□□ 1.45
SPSB3-212ENST00000569769 HMGXB3Q12766 1538 aa24.07■■□□□ 1.44
SPSB3-212ENST00000569769 BAZ1AQ9NRL2 1556 aaPredicted RBP24.07■■□□□ 1.44
SPSB3-212ENST00000569769 BAZ1BQ9UIG0 1483 aaKnown RBP23.97■■□□□ 1.43
SPSB3-212ENST00000569769 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.43
SPSB3-212ENST00000569769 ERCC6Q03468 1493 aa23.95■■□□□ 1.42
SPSB3-212ENST00000569769 PEG3Q9GZU2 1588 aa23.94■■□□□ 1.42
SPSB3-212ENST00000569769 NESP48681 1621 aa23.92■■□□□ 1.42
SPSB3-212ENST00000569769 CUX2O14529 1486 aa23.83■■□□□ 1.41
SPSB3-212ENST00000569769 DNAJC5Q9H3Z4 198 aa23.73■■□□□ 1.39
SPSB3-212ENST00000569769 WIZO95785 1651 aa23.73■■□□□ 1.39
SPSB3-212ENST00000569769 LAMC3Q9Y6N6 1575 aa23.69■■□□□ 1.38
SPSB3-212ENST00000569769 KIF21AQ7Z4S6 1674 aa23.68■■□□□ 1.38
SPSB3-212ENST00000569769 THOC2Q8NI27 1593 aaKnown RBP23.66■■□□□ 1.38
SPSB3-212ENST00000569769 PDS5BQ9NTI5 1447 aa23.5■■□□□ 1.35
SPSB3-212ENST00000569769 CADPSQ9ULU8 1353 aa23.48■■□□□ 1.35
SPSB3-212ENST00000569769 RSF1Q96T23 1441 aaPredicted RBP23.43■■□□□ 1.34
SPSB3-212ENST00000569769 TOP2AP11388 1531 aaKnown RBP23.35■■□□□ 1.33
SPSB3-212ENST00000569769 MRC2Q9UBG0 1479 aa23.35■■□□□ 1.33
SPSB3-212ENST00000569769 WDR62O43379 1518 aa23.29■■□□□ 1.32
SPSB3-212ENST00000569769 CEP164Q9UPV0 1460 aa23.28■■□□□ 1.32
SPSB3-212ENST00000569769 FANCD2Q9BXW9 1451 aa23.26■■□□□ 1.31
SPSB3-212ENST00000569769 CFTRP13569 1480 aa23.24■■□□□ 1.31
SPSB3-212ENST00000569769 PRDM2Q13029 1718 aa23.17■■□□□ 1.3
SPSB3-212ENST00000569769 URB2Q14146 1524 aaKnown RBP23.09■■□□□ 1.29
SPSB3-212ENST00000569769 CCDC88BA6NC98 1476 aa23.09■■□□□ 1.29
SPSB3-212ENST00000569769 TOPBP1Q92547 1522 aa22.84■■□□□ 1.25
SPSB3-212ENST00000569769 TRIM41Q8WV44 630 aa22.81■■□□□ 1.24
SPSB3-212ENST00000569769 ZNF608Q9ULD9 1512 aaPredicted RBP22.81■■□□□ 1.24
SPSB3-212ENST00000569769 IFT140Q96RY7 1462 aa22.78■■□□□ 1.24
SPSB3-212ENST00000569769 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
SPSB3-212ENST00000569769 SUPT5HO00267 1087 aaKnown RBP22.74■■□□□ 1.23
SPSB3-212ENST00000569769 OSCARQ8IYS5 282 aa22.74■■□□□ 1.23
SPSB3-212ENST00000569769 EIF4G3O43432 1585 aaKnown RBP22.71■■□□□ 1.23
SPSB3-212ENST00000569769 ABCC8Q09428 1581 aa22.71■■□□□ 1.23
SPSB3-212ENST00000569769 TARBP1Q13395 1621 aaKnown RBP22.66■■□□□ 1.22
SPSB3-212ENST00000569769 POLA1P09884 1462 aaPredicted RBP22.61■■□□□ 1.21
SPSB3-212ENST00000569769 AQRO60306 1485 aaKnown RBP eCLIP22.6■■□□□ 1.212e-8■■■■■ 44.6
SPSB3-212ENST00000569769 CHD1O14646 1710 aa22.59■■□□□ 1.21
SPSB3-212ENST00000569769 RIMBP3CA6NJZ7 1639 aa22.57■■□□□ 1.2
SPSB3-212ENST00000569769 RIMBP3BA6NNM3 1639 aa22.57■■□□□ 1.2
SPSB3-212ENST00000569769 RIMBP3Q9UFD9 1639 aa22.57■■□□□ 1.2
SPSB3-212ENST00000569769 RAD54L2Q9Y4B4 1467 aa22.56■■□□□ 1.2
SPSB3-212ENST00000569769 CUX1P39880 1505 aa22.5■■□□□ 1.19
SPSB3-212ENST00000569769 FGD5Q6ZNL6 1462 aa22.49■■□□□ 1.19
SPSB3-212ENST00000569769 SOGA1O94964 1423 aa22.48■■□□□ 1.19
SPSB3-212ENST00000569769 TDRD9Q8NDG6 1382 aaKnown RBP22.46■■□□□ 1.19
SPSB3-212ENST00000569769 ARHGEF11O15085 1522 aa22.46■■□□□ 1.19
SPSB3-212ENST00000569769 FBLN2P98095 1184 aa22.42■■□□□ 1.18
SPSB3-212ENST00000569769 WDR97A6NE52 1622 aa22.39■■□□□ 1.17
SPSB3-212ENST00000569769 SNAPC4Q5SXM2 1469 aa22.37■■□□□ 1.17
SPSB3-212ENST00000569769 PBRM1Q86U86 1689 aa22.33■■□□□ 1.16
SPSB3-212ENST00000569769 CYB5RLQ6IPT4 315 aa22.27■■□□□ 1.16
SPSB3-212ENST00000569769 GRIN2BQ13224 1484 aa22.27■■□□□ 1.16
SPSB3-212ENST00000569769 MAGI1Q96QZ7 1491 aaPredicted RBP22.26■■□□□ 1.15
SPSB3-212ENST00000569769 ARAP1Q96P48 1450 aa22.25■■□□□ 1.15
SPSB3-212ENST00000569769 CLASP1Q7Z460 1538 aa22.23■■□□□ 1.15
SPSB3-212ENST00000569769 ABCA5Q8WWZ7 1642 aa22.22■■□□□ 1.15
SPSB3-212ENST00000569769 CHMP7Q8WUX9 453 aaPredicted RBP22.22■■□□□ 1.15
SPSB3-212ENST00000569769 GAPVD1Q14C86 1478 aa22.22■■□□□ 1.15
SPSB3-212ENST00000569769 SYNJ1O43426 1573 aa22.21■■□□□ 1.15
SPSB3-212ENST00000569769 ABCA10Q8WWZ4 1543 aa22.2■■□□□ 1.14
SPSB3-212ENST00000569769 SYNJ2O15056 1496 aa22.19■■□□□ 1.14
SPSB3-212ENST00000569769 BIVM-ERCC5R4GMW8 1640 aa22.17■■□□□ 1.14
SPSB3-212ENST00000569769 TOP2BQ02880 1626 aa22.14■■□□□ 1.14
SPSB3-212ENST00000569769 WRNQ14191 1432 aaPredicted RBP eCLIP22.1■■□□□ 1.13
SPSB3-212ENST00000569769 ADAMTS12P58397 1594 aa22.05■■□□□ 1.12
SPSB3-212ENST00000569769 GRIN2AQ12879 1464 aa22.01■■□□□ 1.11
SPSB3-212ENST00000569769 TRHP20396 242 aaPredicted RBP22■■□□□ 1.11
SPSB3-212ENST00000569769 CEP170Q5SW79 1584 aa21.98■■□□□ 1.11
SPSB3-212ENST00000569769 ERCC6L2Q5T890 1561 aa21.96■■□□□ 1.11
SPSB3-212ENST00000569769 ERICH3Q5RHP9 1530 aa21.92■■□□□ 1.1
SPSB3-212ENST00000569769 FHAD1B1AJZ9 1412 aa21.91■■□□□ 1.1
SPSB3-212ENST00000569769 NUP160Q12769 1436 aa21.9■■□□□ 1.1
SPSB3-212ENST00000569769 SHROOM2Q13796 1616 aa21.85■■□□□ 1.09
SPSB3-212ENST00000569769 RUSC2Q8N2Y8 1516 aa21.74■■□□□ 1.07
SPSB3-212ENST00000569769 PRG4Q92954 1404 aaPredicted RBP21.71■■□□□ 1.07
SPSB3-212ENST00000569769 CUL7Q14999 1698 aa21.66■■□□□ 1.06
SPSB3-212ENST00000569769 JPH4Q96JJ6 628 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms