RNA–Protein interactions for RNA: ENST00000569769.1

SPSB3-212, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-212ENST00000569769 NISCHQ9Y2I1 1504 aa31.03■■■□□ 2.56
SPSB3-212ENST00000569769 CCDC180Q9P1Z9 1646 aa27.84■■■□□ 2.05
SPSB3-212ENST00000569769 ABCC9O60706 1549 aa27.8■■■□□ 2.04
SPSB3-212ENST00000569769 RB1CC1Q8TDY2 1594 aa26.44■■□□□ 1.82
SPSB3-212ENST00000569769 NACADO15069 1562 aa26.24■■□□□ 1.79
SPSB3-212ENST00000569769 DCAF8L2P0C7V8 631 aa26.19■■□□□ 1.78
SPSB3-212ENST00000569769 UNC13AQ9UPW8 1703 aa26.02■■□□□ 1.76
SPSB3-212ENST00000569769 DNAJC5BQ9UF47 199 aa25.99■■□□□ 1.75
SPSB3-212ENST00000569769 PABPN1Q86U42 306 aaKnown RBP eCLIP25.88■■□□□ 1.73
SPSB3-212ENST00000569769 MYO15BQ96JP2 1530 aa25.84■■□□□ 1.73
SPSB3-212ENST00000569769 ZCCHC6Q5VYS8 1495 aaKnown RBP25.73■■□□□ 1.71
SPSB3-212ENST00000569769 BICRAQ9NZM4 1560 aa25.72■■□□□ 1.71
SPSB3-212ENST00000569769 DCAF1Q9Y4B6 1507 aa25.57■■□□□ 1.68
SPSB3-212ENST00000569769 SCRIBQ14160 1630 aa25.45■■□□□ 1.66
SPSB3-212ENST00000569769 SHROOM4Q9ULL8 1493 aa25.22■■□□□ 1.63
SPSB3-212ENST00000569769 CC2D2AQ9P2K1 1620 aa25.12■■□□□ 1.61
SPSB3-212ENST00000569769 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
SPSB3-212ENST00000569769 CECR2Q9BXF3 1484 aa24.99■■□□□ 1.59
SPSB3-212ENST00000569769 SMARCA4P51532 1647 aa24.24■■□□□ 1.47
SPSB3-212ENST00000569769 NCAPD3P42695 1498 aa24.2■■□□□ 1.47
SPSB3-212ENST00000569769 ATAD2BQ9ULI0 1458 aa24.19■■□□□ 1.46
SPSB3-212ENST00000569769 SMARCA2P51531 1590 aa24.11■■□□□ 1.45
SPSB3-212ENST00000569769 HMGXB3Q12766 1538 aa24.07■■□□□ 1.44
SPSB3-212ENST00000569769 BAZ1AQ9NRL2 1556 aaPredicted RBP24.07■■□□□ 1.44
SPSB3-212ENST00000569769 BAZ1BQ9UIG0 1483 aaKnown RBP23.97■■□□□ 1.43
SPSB3-212ENST00000569769 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.43
SPSB3-212ENST00000569769 ERCC6Q03468 1493 aa23.95■■□□□ 1.42
SPSB3-212ENST00000569769 PEG3Q9GZU2 1588 aa23.94■■□□□ 1.42
SPSB3-212ENST00000569769 NESP48681 1621 aa23.92■■□□□ 1.42
SPSB3-212ENST00000569769 CUX2O14529 1486 aa23.83■■□□□ 1.41
SPSB3-212ENST00000569769 DNAJC5Q9H3Z4 198 aa23.73■■□□□ 1.39
SPSB3-212ENST00000569769 WIZO95785 1651 aa23.73■■□□□ 1.39
SPSB3-212ENST00000569769 LAMC3Q9Y6N6 1575 aa23.69■■□□□ 1.38
SPSB3-212ENST00000569769 KIF21AQ7Z4S6 1674 aa23.68■■□□□ 1.38
SPSB3-212ENST00000569769 THOC2Q8NI27 1593 aaKnown RBP23.66■■□□□ 1.38
SPSB3-212ENST00000569769 PDS5BQ9NTI5 1447 aa23.5■■□□□ 1.35
SPSB3-212ENST00000569769 CADPSQ9ULU8 1353 aa23.48■■□□□ 1.35
SPSB3-212ENST00000569769 RSF1Q96T23 1441 aaPredicted RBP23.43■■□□□ 1.34
SPSB3-212ENST00000569769 TOP2AP11388 1531 aaKnown RBP23.35■■□□□ 1.33
SPSB3-212ENST00000569769 MRC2Q9UBG0 1479 aa23.35■■□□□ 1.33
SPSB3-212ENST00000569769 WDR62O43379 1518 aa23.29■■□□□ 1.32
SPSB3-212ENST00000569769 CEP164Q9UPV0 1460 aa23.28■■□□□ 1.32
SPSB3-212ENST00000569769 FANCD2Q9BXW9 1451 aa23.26■■□□□ 1.31
SPSB3-212ENST00000569769 CFTRP13569 1480 aa23.24■■□□□ 1.31
SPSB3-212ENST00000569769 PRDM2Q13029 1718 aa23.17■■□□□ 1.3
SPSB3-212ENST00000569769 URB2Q14146 1524 aaKnown RBP23.09■■□□□ 1.29
SPSB3-212ENST00000569769 CCDC88BA6NC98 1476 aa23.09■■□□□ 1.29
SPSB3-212ENST00000569769 TOPBP1Q92547 1522 aa22.84■■□□□ 1.25
SPSB3-212ENST00000569769 TRIM41Q8WV44 630 aa22.81■■□□□ 1.24
SPSB3-212ENST00000569769 ZNF608Q9ULD9 1512 aaPredicted RBP22.81■■□□□ 1.24
SPSB3-212ENST00000569769 IFT140Q96RY7 1462 aa22.78■■□□□ 1.24
SPSB3-212ENST00000569769 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
SPSB3-212ENST00000569769 SUPT5HO00267 1087 aaKnown RBP22.74■■□□□ 1.23
SPSB3-212ENST00000569769 OSCARQ8IYS5 282 aa22.74■■□□□ 1.23
SPSB3-212ENST00000569769 EIF4G3O43432 1585 aaKnown RBP22.71■■□□□ 1.23
SPSB3-212ENST00000569769 ABCC8Q09428 1581 aa22.71■■□□□ 1.23
SPSB3-212ENST00000569769 TARBP1Q13395 1621 aaKnown RBP22.66■■□□□ 1.22
SPSB3-212ENST00000569769 POLA1P09884 1462 aaPredicted RBP22.61■■□□□ 1.21
SPSB3-212ENST00000569769 AQRO60306 1485 aaKnown RBP eCLIP22.6■■□□□ 1.212e-8■■■■■ 44.6
SPSB3-212ENST00000569769 CHD1O14646 1710 aa22.59■■□□□ 1.21
SPSB3-212ENST00000569769 RIMBP3CA6NJZ7 1639 aa22.57■■□□□ 1.2
SPSB3-212ENST00000569769 RIMBP3BA6NNM3 1639 aa22.57■■□□□ 1.2
SPSB3-212ENST00000569769 RIMBP3Q9UFD9 1639 aa22.57■■□□□ 1.2
SPSB3-212ENST00000569769 RAD54L2Q9Y4B4 1467 aa22.56■■□□□ 1.2
SPSB3-212ENST00000569769 CUX1P39880 1505 aa22.5■■□□□ 1.19
SPSB3-212ENST00000569769 FGD5Q6ZNL6 1462 aa22.49■■□□□ 1.19
SPSB3-212ENST00000569769 SOGA1O94964 1423 aa22.48■■□□□ 1.19
SPSB3-212ENST00000569769 TDRD9Q8NDG6 1382 aaKnown RBP22.46■■□□□ 1.19
SPSB3-212ENST00000569769 ARHGEF11O15085 1522 aa22.46■■□□□ 1.19
SPSB3-212ENST00000569769 FBLN2P98095 1184 aa22.42■■□□□ 1.18
SPSB3-212ENST00000569769 WDR97A6NE52 1622 aa22.39■■□□□ 1.17
SPSB3-212ENST00000569769 SNAPC4Q5SXM2 1469 aa22.37■■□□□ 1.17
SPSB3-212ENST00000569769 PBRM1Q86U86 1689 aa22.33■■□□□ 1.16
SPSB3-212ENST00000569769 CYB5RLQ6IPT4 315 aa22.27■■□□□ 1.16
SPSB3-212ENST00000569769 GRIN2BQ13224 1484 aa22.27■■□□□ 1.16
SPSB3-212ENST00000569769 MAGI1Q96QZ7 1491 aaPredicted RBP22.26■■□□□ 1.15
SPSB3-212ENST00000569769 ARAP1Q96P48 1450 aa22.25■■□□□ 1.15
SPSB3-212ENST00000569769 CLASP1Q7Z460 1538 aa22.23■■□□□ 1.15
SPSB3-212ENST00000569769 ABCA5Q8WWZ7 1642 aa22.22■■□□□ 1.15
SPSB3-212ENST00000569769 CHMP7Q8WUX9 453 aaPredicted RBP22.22■■□□□ 1.15
SPSB3-212ENST00000569769 GAPVD1Q14C86 1478 aa22.22■■□□□ 1.15
SPSB3-212ENST00000569769 SYNJ1O43426 1573 aa22.21■■□□□ 1.15
SPSB3-212ENST00000569769 ABCA10Q8WWZ4 1543 aa22.2■■□□□ 1.14
SPSB3-212ENST00000569769 SYNJ2O15056 1496 aa22.19■■□□□ 1.14
SPSB3-212ENST00000569769 BIVM-ERCC5R4GMW8 1640 aa22.17■■□□□ 1.14
SPSB3-212ENST00000569769 TOP2BQ02880 1626 aa22.14■■□□□ 1.14
SPSB3-212ENST00000569769 WRNQ14191 1432 aaPredicted RBP eCLIP22.1■■□□□ 1.13
SPSB3-212ENST00000569769 ADAMTS12P58397 1594 aa22.05■■□□□ 1.12
SPSB3-212ENST00000569769 GRIN2AQ12879 1464 aa22.01■■□□□ 1.11
SPSB3-212ENST00000569769 TRHP20396 242 aaPredicted RBP22■■□□□ 1.11
SPSB3-212ENST00000569769 CEP170Q5SW79 1584 aa21.98■■□□□ 1.11
SPSB3-212ENST00000569769 ERCC6L2Q5T890 1561 aa21.96■■□□□ 1.11
SPSB3-212ENST00000569769 ERICH3Q5RHP9 1530 aa21.92■■□□□ 1.1
SPSB3-212ENST00000569769 FHAD1B1AJZ9 1412 aa21.91■■□□□ 1.1
SPSB3-212ENST00000569769 NUP160Q12769 1436 aa21.9■■□□□ 1.1
SPSB3-212ENST00000569769 SHROOM2Q13796 1616 aa21.85■■□□□ 1.09
SPSB3-212ENST00000569769 RUSC2Q8N2Y8 1516 aa21.74■■□□□ 1.07
SPSB3-212ENST00000569769 PRG4Q92954 1404 aaPredicted RBP21.71■■□□□ 1.07
SPSB3-212ENST00000569769 CUL7Q14999 1698 aa21.66■■□□□ 1.06
SPSB3-212ENST00000569769 JPH4Q96JJ6 628 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms