RNA–Protein interactions for RNA: ENST00000569758.1

NEIL1-224, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 2

Gene NEIL1, Length 498 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-224ENST00000569758 NISCHQ9Y2I1 1504 aa32.07■■■□□ 2.72
NEIL1-224ENST00000569758 CCDC180Q9P1Z9 1646 aa28.8■■■□□ 2.2
NEIL1-224ENST00000569758 ABCC9O60706 1549 aa28.45■■■□□ 2.15
NEIL1-224ENST00000569758 RB1CC1Q8TDY2 1594 aa27.26■■□□□ 1.96
NEIL1-224ENST00000569758 NACADO15069 1562 aa27.14■■□□□ 1.93
NEIL1-224ENST00000569758 MYO15BQ96JP2 1530 aa26.87■■□□□ 1.89
NEIL1-224ENST00000569758 DCAF8L2P0C7V8 631 aa26.81■■□□□ 1.88
NEIL1-224ENST00000569758 UNC13AQ9UPW8 1703 aa26.73■■□□□ 1.87
NEIL1-224ENST00000569758 ZCCHC6Q5VYS8 1495 aaKnown RBP26.63■■□□□ 1.85
NEIL1-224ENST00000569758 DCAF1Q9Y4B6 1507 aa26.58■■□□□ 1.85
NEIL1-224ENST00000569758 DNAJC5BQ9UF47 199 aa26.52■■□□□ 1.84
NEIL1-224ENST00000569758 BICRAQ9NZM4 1560 aa26.47■■□□□ 1.83
NEIL1-224ENST00000569758 PABPN1Q86U42 306 aaKnown RBP eCLIP26.47■■□□□ 1.83
NEIL1-224ENST00000569758 SHROOM4Q9ULL8 1493 aa26.18■■□□□ 1.78
NEIL1-224ENST00000569758 SCRIBQ14160 1630 aa26.13■■□□□ 1.77
NEIL1-224ENST00000569758 EIF4G1Q04637 1599 aaKnown RBP25.79■■□□□ 1.72
NEIL1-224ENST00000569758 CC2D2AQ9P2K1 1620 aa25.79■■□□□ 1.72
NEIL1-224ENST00000569758 CECR2Q9BXF3 1484 aa25.65■■□□□ 1.7
NEIL1-224ENST00000569758 NCAPD3P42695 1498 aa25.02■■□□□ 1.6
NEIL1-224ENST00000569758 SMARCA4P51532 1647 aa25■■□□□ 1.59
NEIL1-224ENST00000569758 ATAD2BQ9ULI0 1458 aa24.95■■□□□ 1.58
NEIL1-224ENST00000569758 SMARCA2P51531 1590 aa24.93■■□□□ 1.58
NEIL1-224ENST00000569758 BAZ1AQ9NRL2 1556 aaPredicted RBP24.9■■□□□ 1.58
NEIL1-224ENST00000569758 HMGXB3Q12766 1538 aa24.89■■□□□ 1.57
NEIL1-224ENST00000569758 PEG3Q9GZU2 1588 aa24.81■■□□□ 1.56
NEIL1-224ENST00000569758 BAZ1BQ9UIG0 1483 aaKnown RBP24.7■■□□□ 1.55
NEIL1-224ENST00000569758 MROH2BQ7Z745 1585 aa24.68■■□□□ 1.54
NEIL1-224ENST00000569758 ERCC6Q03468 1493 aa24.57■■□□□ 1.52
NEIL1-224ENST00000569758 CUX2O14529 1486 aa24.55■■□□□ 1.52
NEIL1-224ENST00000569758 NESP48681 1621 aa24.51■■□□□ 1.51
NEIL1-224ENST00000569758 LAMC3Q9Y6N6 1575 aa24.46■■□□□ 1.51
NEIL1-224ENST00000569758 WIZO95785 1651 aa24.42■■□□□ 1.5
NEIL1-224ENST00000569758 THOC2Q8NI27 1593 aaKnown RBP24.31■■□□□ 1.48
NEIL1-224ENST00000569758 KIF21AQ7Z4S6 1674 aa24.29■■□□□ 1.48
NEIL1-224ENST00000569758 DNAJC5Q9H3Z4 198 aa24.27■■□□□ 1.48
NEIL1-224ENST00000569758 PDS5BQ9NTI5 1447 aa24.26■■□□□ 1.47
NEIL1-224ENST00000569758 CADPSQ9ULU8 1353 aa24.23■■□□□ 1.47
NEIL1-224ENST00000569758 RSF1Q96T23 1441 aaPredicted RBP24.23■■□□□ 1.47
NEIL1-224ENST00000569758 TOP2AP11388 1531 aaKnown RBP24.14■■□□□ 1.45
NEIL1-224ENST00000569758 MRC2Q9UBG0 1479 aa24.04■■□□□ 1.44
NEIL1-224ENST00000569758 CFTRP13569 1480 aa24.02■■□□□ 1.44
NEIL1-224ENST00000569758 WDR62O43379 1518 aa24.01■■□□□ 1.43
NEIL1-224ENST00000569758 CEP164Q9UPV0 1460 aa23.98■■□□□ 1.43
NEIL1-224ENST00000569758 FANCD2Q9BXW9 1451 aa23.95■■□□□ 1.42
NEIL1-224ENST00000569758 PRDM2Q13029 1718 aa23.93■■□□□ 1.42
NEIL1-224ENST00000569758 CCDC88BA6NC98 1476 aa23.81■■□□□ 1.4
NEIL1-224ENST00000569758 URB2Q14146 1524 aaKnown RBP23.75■■□□□ 1.39
NEIL1-224ENST00000569758 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
NEIL1-224ENST00000569758 ABCC8Q09428 1581 aa23.53■■□□□ 1.36
NEIL1-224ENST00000569758 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
NEIL1-224ENST00000569758 DNMBPQ6XZF7 1577 aa23.49■■□□□ 1.35
NEIL1-224ENST00000569758 ZNF608Q9ULD9 1512 aaPredicted RBP23.4■■□□□ 1.34
NEIL1-224ENST00000569758 OSCARQ8IYS5 282 aa23.38■■□□□ 1.33
NEIL1-224ENST00000569758 TARBP1Q13395 1621 aaKnown RBP23.37■■□□□ 1.33
NEIL1-224ENST00000569758 EIF4G3O43432 1585 aaKnown RBP23.34■■□□□ 1.33
NEIL1-224ENST00000569758 POLA1P09884 1462 aaPredicted RBP23.3■■□□□ 1.32
NEIL1-224ENST00000569758 AQRO60306 1485 aaKnown RBP eCLIP23.2■■□□□ 1.3
NEIL1-224ENST00000569758 WDR97A6NE52 1622 aa23.19■■□□□ 1.3
NEIL1-224ENST00000569758 CUX1P39880 1505 aa23.19■■□□□ 1.3
NEIL1-224ENST00000569758 TRIM41Q8WV44 630 aa23.17■■□□□ 1.3
NEIL1-224ENST00000569758 FGD5Q6ZNL6 1462 aa23.17■■□□□ 1.3
NEIL1-224ENST00000569758 RAD54L2Q9Y4B4 1467 aa23.17■■□□□ 1.3
NEIL1-224ENST00000569758 SOGA1O94964 1423 aa23.16■■□□□ 1.3
NEIL1-224ENST00000569758 CHD1O14646 1710 aa23.16■■□□□ 1.3
NEIL1-224ENST00000569758 SUPT5HO00267 1087 aaKnown RBP23.15■■□□□ 1.3
NEIL1-224ENST00000569758 RIMBP3CA6NJZ7 1639 aa23.11■■□□□ 1.29
NEIL1-224ENST00000569758 RIMBP3BA6NNM3 1639 aa23.11■■□□□ 1.29
NEIL1-224ENST00000569758 RIMBP3Q9UFD9 1639 aa23.11■■□□□ 1.29
NEIL1-224ENST00000569758 TDRD9Q8NDG6 1382 aaKnown RBP23.07■■□□□ 1.28
NEIL1-224ENST00000569758 ARHGEF11O15085 1522 aa23.04■■□□□ 1.28
NEIL1-224ENST00000569758 SNAPC4Q5SXM2 1469 aa22.98■■□□□ 1.27
NEIL1-224ENST00000569758 MAGI1Q96QZ7 1491 aaPredicted RBP22.98■■□□□ 1.27
NEIL1-224ENST00000569758 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
NEIL1-224ENST00000569758 PBRM1Q86U86 1689 aa22.97■■□□□ 1.27
NEIL1-224ENST00000569758 ABCA10Q8WWZ4 1543 aa22.95■■□□□ 1.26
NEIL1-224ENST00000569758 BIVM-ERCC5R4GMW8 1640 aa22.93■■□□□ 1.26
NEIL1-224ENST00000569758 FBLN2P98095 1184 aa22.93■■□□□ 1.26
NEIL1-224ENST00000569758 ABCA5Q8WWZ7 1642 aa22.93■■□□□ 1.26
NEIL1-224ENST00000569758 GAPVD1Q14C86 1478 aa22.92■■□□□ 1.26
NEIL1-224ENST00000569758 TOP2BQ02880 1626 aa22.91■■□□□ 1.26
NEIL1-224ENST00000569758 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
NEIL1-224ENST00000569758 SYNJ2O15056 1496 aa22.89■■□□□ 1.25
NEIL1-224ENST00000569758 SYNJ1O43426 1573 aa22.88■■□□□ 1.25
NEIL1-224ENST00000569758 WRNQ14191 1432 aaPredicted RBP eCLIP22.86■■□□□ 1.25
NEIL1-224ENST00000569758 CHMP7Q8WUX9 453 aaPredicted RBP22.85■■□□□ 1.25
NEIL1-224ENST00000569758 ARAP1Q96P48 1450 aa22.81■■□□□ 1.24
NEIL1-224ENST00000569758 CYB5RLQ6IPT4 315 aa22.77■■□□□ 1.24
NEIL1-224ENST00000569758 ADAMTS12P58397 1594 aa22.72■■□□□ 1.23
NEIL1-224ENST00000569758 GRIN2AQ12879 1464 aa22.69■■□□□ 1.22
NEIL1-224ENST00000569758 ERICH3Q5RHP9 1530 aa22.68■■□□□ 1.22
NEIL1-224ENST00000569758 FHAD1B1AJZ9 1412 aa22.64■■□□□ 1.21
NEIL1-224ENST00000569758 NUP160Q12769 1436 aa22.62■■□□□ 1.21
NEIL1-224ENST00000569758 CEP170Q5SW79 1584 aa22.61■■□□□ 1.21
NEIL1-224ENST00000569758 SHROOM2Q13796 1616 aa22.55■■□□□ 1.2
NEIL1-224ENST00000569758 ERCC6L2Q5T890 1561 aa22.49■■□□□ 1.19
NEIL1-224ENST00000569758 TRHP20396 242 aaPredicted RBP22.44■■□□□ 1.18
NEIL1-224ENST00000569758 CUL7Q14999 1698 aa22.41■■□□□ 1.18
NEIL1-224ENST00000569758 KIF27Q86VH2 1401 aa22.4■■□□□ 1.18
NEIL1-224ENST00000569758 RUSC2Q8N2Y8 1516 aa22.4■■□□□ 1.18
NEIL1-224ENST00000569758 IGF1RP08069 1367 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms