RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 NISCHQ9Y2I1 1504 aa27.06■■□□□ 1.92
SHCBP1-207ENST00000569702 CCDC180Q9P1Z9 1646 aa24.03■■□□□ 1.44
SHCBP1-207ENST00000569702 ABCC9O60706 1549 aa23.57■■□□□ 1.36
SHCBP1-207ENST00000569702 RB1CC1Q8TDY2 1594 aa22.65■■□□□ 1.22
SHCBP1-207ENST00000569702 NACADO15069 1562 aa22.63■■□□□ 1.21
SHCBP1-207ENST00000569702 DCAF8L2P0C7V8 631 aa22.58■■□□□ 1.21
SHCBP1-207ENST00000569702 MYO15BQ96JP2 1530 aa22.52■■□□□ 1.2
SHCBP1-207ENST00000569702 ZCCHC6Q5VYS8 1495 aaKnown RBP22.52■■□□□ 1.2
SHCBP1-207ENST00000569702 DCAF1Q9Y4B6 1507 aa22.4■■□□□ 1.18
SHCBP1-207ENST00000569702 UNC13AQ9UPW8 1703 aa22.12■■□□□ 1.13
SHCBP1-207ENST00000569702 PABPN1Q86U42 306 aaKnown RBP eCLIP22.04■■□□□ 1.12
SHCBP1-207ENST00000569702 BICRAQ9NZM4 1560 aa22■■□□□ 1.11
SHCBP1-207ENST00000569702 SCRIBQ14160 1630 aa21.91■■□□□ 1.1
SHCBP1-207ENST00000569702 SHROOM4Q9ULL8 1493 aa21.77■■□□□ 1.07
SHCBP1-207ENST00000569702 DNAJC5BQ9UF47 199 aa21.74■■□□□ 1.07
SHCBP1-207ENST00000569702 EIF4G1Q04637 1599 aaKnown RBP21.4■■□□□ 1.02
SHCBP1-207ENST00000569702 CC2D2AQ9P2K1 1620 aa21.32■■□□□ 1
SHCBP1-207ENST00000569702 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
SHCBP1-207ENST00000569702 SMARCA4P51532 1647 aa20.97■□□□□ 0.95
SHCBP1-207ENST00000569702 BAZ1AQ9NRL2 1556 aaPredicted RBP20.95■□□□□ 0.94
SHCBP1-207ENST00000569702 NCAPD3P42695 1498 aa20.92■□□□□ 0.94
SHCBP1-207ENST00000569702 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
SHCBP1-207ENST00000569702 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
SHCBP1-207ENST00000569702 MROH2BQ7Z745 1585 aa20.84■□□□□ 0.93
SHCBP1-207ENST00000569702 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
SHCBP1-207ENST00000569702 HMGXB3Q12766 1538 aa20.78■□□□□ 0.92
SHCBP1-207ENST00000569702 BAZ1BQ9UIG0 1483 aaKnown RBP20.7■□□□□ 0.9
SHCBP1-207ENST00000569702 RSF1Q96T23 1441 aaPredicted RBP20.61■□□□□ 0.89
SHCBP1-207ENST00000569702 WIZO95785 1651 aa20.59■□□□□ 0.89
SHCBP1-207ENST00000569702 NESP48681 1621 aa20.39■□□□□ 0.86
SHCBP1-207ENST00000569702 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
SHCBP1-207ENST00000569702 LAMC3Q9Y6N6 1575 aa20.34■□□□□ 0.85
SHCBP1-207ENST00000569702 CADPSQ9ULU8 1353 aa20.3■□□□□ 0.84
SHCBP1-207ENST00000569702 ERCC6Q03468 1493 aa20.3■□□□□ 0.84
SHCBP1-207ENST00000569702 PDS5BQ9NTI5 1447 aa20.21■□□□□ 0.83
SHCBP1-207ENST00000569702 CFTRP13569 1480 aa20.17■□□□□ 0.82
SHCBP1-207ENST00000569702 CCDC88BA6NC98 1476 aa20.16■□□□□ 0.82
SHCBP1-207ENST00000569702 CUX2O14529 1486 aa20.14■□□□□ 0.81
SHCBP1-207ENST00000569702 KIF21AQ7Z4S6 1674 aa20.12■□□□□ 0.81
SHCBP1-207ENST00000569702 THOC2Q8NI27 1593 aaKnown RBP20.08■□□□□ 0.81
SHCBP1-207ENST00000569702 FANCD2Q9BXW9 1451 aa20.04■□□□□ 0.8
SHCBP1-207ENST00000569702 CEP164Q9UPV0 1460 aa20■□□□□ 0.79
SHCBP1-207ENST00000569702 SUPT5HO00267 1087 aaKnown RBP20■□□□□ 0.79
SHCBP1-207ENST00000569702 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
SHCBP1-207ENST00000569702 WDR62O43379 1518 aa19.94■□□□□ 0.78
SHCBP1-207ENST00000569702 PRDM2Q13029 1718 aa19.93■□□□□ 0.78
SHCBP1-207ENST00000569702 URB2Q14146 1524 aaKnown RBP19.85■□□□□ 0.77
SHCBP1-207ENST00000569702 ABCC8Q09428 1581 aa19.71■□□□□ 0.75
SHCBP1-207ENST00000569702 TOPBP1Q92547 1522 aa19.71■□□□□ 0.75
SHCBP1-207ENST00000569702 DNMBPQ6XZF7 1577 aa19.67■□□□□ 0.74
SHCBP1-207ENST00000569702 DNAJC5Q9H3Z4 198 aa19.61■□□□□ 0.73
SHCBP1-207ENST00000569702 IFT140Q96RY7 1462 aa19.6■□□□□ 0.73
SHCBP1-207ENST00000569702 CUX1P39880 1505 aa19.55■□□□□ 0.72
SHCBP1-207ENST00000569702 POLA1P09884 1462 aaPredicted RBP19.54■□□□□ 0.72
SHCBP1-207ENST00000569702 ZNF608Q9ULD9 1512 aaPredicted RBP19.52■□□□□ 0.72
SHCBP1-207ENST00000569702 TARBP1Q13395 1621 aaKnown RBP19.51■□□□□ 0.71
SHCBP1-207ENST00000569702 FGD5Q6ZNL6 1462 aa19.48■□□□□ 0.71
SHCBP1-207ENST00000569702 SOGA1O94964 1423 aa19.47■□□□□ 0.71
SHCBP1-207ENST00000569702 RAD54L2Q9Y4B4 1467 aa19.46■□□□□ 0.71
SHCBP1-207ENST00000569702 EIF4G3O43432 1585 aaKnown RBP19.41■□□□□ 0.7
SHCBP1-207ENST00000569702 WRNQ14191 1432 aaPredicted RBP eCLIP19.41■□□□□ 0.7
SHCBP1-207ENST00000569702 AQRO60306 1485 aaKnown RBP eCLIP19.41■□□□□ 0.73e-8■■■■■ 37.6
SHCBP1-207ENST00000569702 TOP2BQ02880 1626 aa19.36■□□□□ 0.69
SHCBP1-207ENST00000569702 TDRD9Q8NDG6 1382 aaKnown RBP19.36■□□□□ 0.69
SHCBP1-207ENST00000569702 BIVM-ERCC5R4GMW8 1640 aa19.35■□□□□ 0.69
SHCBP1-207ENST00000569702 SYNJ1O43426 1573 aa19.35■□□□□ 0.69
SHCBP1-207ENST00000569702 WDR97A6NE52 1622 aa19.34■□□□□ 0.69
SHCBP1-207ENST00000569702 OSCARQ8IYS5 282 aa19.31■□□□□ 0.68
SHCBP1-207ENST00000569702 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
SHCBP1-207ENST00000569702 GRIN2BQ13224 1484 aa19.24■□□□□ 0.67
SHCBP1-207ENST00000569702 GAPVD1Q14C86 1478 aa19.23■□□□□ 0.67
SHCBP1-207ENST00000569702 ABCA5Q8WWZ7 1642 aa19.22■□□□□ 0.67
SHCBP1-207ENST00000569702 SNAPC4Q5SXM2 1469 aa19.21■□□□□ 0.67
SHCBP1-207ENST00000569702 MAGI1Q96QZ7 1491 aaPredicted RBP19.2■□□□□ 0.66
SHCBP1-207ENST00000569702 CHD1O14646 1710 aa19.16■□□□□ 0.66
SHCBP1-207ENST00000569702 PBRM1Q86U86 1689 aa19.15■□□□□ 0.66
SHCBP1-207ENST00000569702 FBLN2P98095 1184 aa19.15■□□□□ 0.66
SHCBP1-207ENST00000569702 SYNJ2O15056 1496 aa19.12■□□□□ 0.65
SHCBP1-207ENST00000569702 CHMP7Q8WUX9 453 aaPredicted RBP19.12■□□□□ 0.65
SHCBP1-207ENST00000569702 ERICH3Q5RHP9 1530 aa19.06■□□□□ 0.64
SHCBP1-207ENST00000569702 ADAMTS12P58397 1594 aa19.02■□□□□ 0.64
SHCBP1-207ENST00000569702 FHAD1B1AJZ9 1412 aa19.02■□□□□ 0.64
SHCBP1-207ENST00000569702 KIF27Q86VH2 1401 aa19■□□□□ 0.63
SHCBP1-207ENST00000569702 CLASP1Q7Z460 1538 aa19■□□□□ 0.63
SHCBP1-207ENST00000569702 GRIN2AQ12879 1464 aa18.99■□□□□ 0.63
SHCBP1-207ENST00000569702 RIMBP3CA6NJZ7 1639 aa18.97■□□□□ 0.63
SHCBP1-207ENST00000569702 RIMBP3BA6NNM3 1639 aa18.97■□□□□ 0.63
SHCBP1-207ENST00000569702 RIMBP3Q9UFD9 1639 aa18.97■□□□□ 0.63
SHCBP1-207ENST00000569702 ARHGEF11O15085 1522 aa18.97■□□□□ 0.63
SHCBP1-207ENST00000569702 IGF1RP08069 1367 aa18.96■□□□□ 0.63
SHCBP1-207ENST00000569702 NUP160Q12769 1436 aa18.93■□□□□ 0.62
SHCBP1-207ENST00000569702 TRIM41Q8WV44 630 aa18.9■□□□□ 0.62
SHCBP1-207ENST00000569702 CEP170Q5SW79 1584 aa18.89■□□□□ 0.62
SHCBP1-207ENST00000569702 CUL7Q14999 1698 aa18.85■□□□□ 0.61
SHCBP1-207ENST00000569702 CARMIL1Q5VZK9 1371 aa18.83■□□□□ 0.61
SHCBP1-207ENST00000569702 ARAP1Q96P48 1450 aa18.83■□□□□ 0.6
SHCBP1-207ENST00000569702 RUSC2Q8N2Y8 1516 aa18.82■□□□□ 0.6
SHCBP1-207ENST00000569702 CYB5RLQ6IPT4 315 aa18.81■□□□□ 0.6
SHCBP1-207ENST00000569702 SHROOM2Q13796 1616 aa18.78■□□□□ 0.6
SHCBP1-207ENST00000569702 JPH4Q96JJ6 628 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms