RNA–Protein interactions for RNA: ENST00000569690.5

EIF3C-214, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

TSL 3

Gene EIF3C, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-214ENST00000569690 NISCHQ9Y2I1 1504 aa32.72■■■□□ 2.83
EIF3C-214ENST00000569690 ABCC9O60706 1549 aa29.37■■■□□ 2.29
EIF3C-214ENST00000569690 CCDC180Q9P1Z9 1646 aa29.15■■■□□ 2.26
EIF3C-214ENST00000569690 DCAF8L2P0C7V8 631 aa27.84■■■□□ 2.05
EIF3C-214ENST00000569690 RB1CC1Q8TDY2 1594 aa27.84■■■□□ 2.05
EIF3C-214ENST00000569690 DNAJC5BQ9UF47 199 aa27.73■■■□□ 2.03
EIF3C-214ENST00000569690 NACADO15069 1562 aa27.68■■■□□ 2.02
EIF3C-214ENST00000569690 PABPN1Q86U42 306 aaKnown RBP eCLIP27.5■■□□□ 1.99
EIF3C-214ENST00000569690 MYO15BQ96JP2 1530 aa27.3■■□□□ 1.96
EIF3C-214ENST00000569690 UNC13AQ9UPW8 1703 aa27.11■■□□□ 1.93
EIF3C-214ENST00000569690 BICRAQ9NZM4 1560 aa27.08■■□□□ 1.93
EIF3C-214ENST00000569690 ZCCHC6Q5VYS8 1495 aaKnown RBP27.06■■□□□ 1.92
EIF3C-214ENST00000569690 DCAF1Q9Y4B6 1507 aa26.95■■□□□ 1.91
EIF3C-214ENST00000569690 SCRIBQ14160 1630 aa26.68■■□□□ 1.86
EIF3C-214ENST00000569690 SHROOM4Q9ULL8 1493 aa26.61■■□□□ 1.85
EIF3C-214ENST00000569690 CC2D2AQ9P2K1 1620 aa26.45■■□□□ 1.82
EIF3C-214ENST00000569690 CECR2Q9BXF3 1484 aa26.44■■□□□ 1.82
EIF3C-214ENST00000569690 EIF4G1Q04637 1599 aaKnown RBP26.39■■□□□ 1.82
EIF3C-214ENST00000569690 NCAPD3P42695 1498 aa25.65■■□□□ 1.7
EIF3C-214ENST00000569690 ATAD2BQ9ULI0 1458 aa25.56■■□□□ 1.68
EIF3C-214ENST00000569690 SMARCA4P51532 1647 aa25.44■■□□□ 1.66
EIF3C-214ENST00000569690 SMARCA2P51531 1590 aa25.4■■□□□ 1.66
EIF3C-214ENST00000569690 DNAJC5Q9H3Z4 198 aa25.39■■□□□ 1.66
EIF3C-214ENST00000569690 BAZ1AQ9NRL2 1556 aaPredicted RBP25.33■■□□□ 1.65
EIF3C-214ENST00000569690 HMGXB3Q12766 1538 aa25.32■■□□□ 1.64
EIF3C-214ENST00000569690 ERCC6Q03468 1493 aa25.31■■□□□ 1.64
EIF3C-214ENST00000569690 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
EIF3C-214ENST00000569690 NESP48681 1621 aa25.25■■□□□ 1.63
EIF3C-214ENST00000569690 MROH2BQ7Z745 1585 aa25.23■■□□□ 1.63
EIF3C-214ENST00000569690 CUX2O14529 1486 aa25.21■■□□□ 1.63
EIF3C-214ENST00000569690 PEG3Q9GZU2 1588 aa25.18■■□□□ 1.62
EIF3C-214ENST00000569690 LAMC3Q9Y6N6 1575 aa24.94■■□□□ 1.58
EIF3C-214ENST00000569690 PDS5BQ9NTI5 1447 aa24.91■■□□□ 1.58
EIF3C-214ENST00000569690 CADPSQ9ULU8 1353 aa24.91■■□□□ 1.58
EIF3C-214ENST00000569690 WIZO95785 1651 aa24.88■■□□□ 1.57
EIF3C-214ENST00000569690 THOC2Q8NI27 1593 aaKnown RBP24.82■■□□□ 1.56
EIF3C-214ENST00000569690 RSF1Q96T23 1441 aaPredicted RBP24.78■■□□□ 1.56
EIF3C-214ENST00000569690 KIF21AQ7Z4S6 1674 aa24.75■■□□□ 1.55
EIF3C-214ENST00000569690 MRC2Q9UBG0 1479 aa24.64■■□□□ 1.54
EIF3C-214ENST00000569690 CFTRP13569 1480 aa24.58■■□□□ 1.52
EIF3C-214ENST00000569690 FANCD2Q9BXW9 1451 aa24.56■■□□□ 1.52
EIF3C-214ENST00000569690 WDR62O43379 1518 aa24.54■■□□□ 1.52
EIF3C-214ENST00000569690 CEP164Q9UPV0 1460 aa24.53■■□□□ 1.52
EIF3C-214ENST00000569690 TOP2AP11388 1531 aaKnown RBP24.53■■□□□ 1.52
EIF3C-214ENST00000569690 CCDC88BA6NC98 1476 aa24.38■■□□□ 1.49
EIF3C-214ENST00000569690 URB2Q14146 1524 aaKnown RBP24.35■■□□□ 1.49
EIF3C-214ENST00000569690 TRIM41Q8WV44 630 aa24.28■■□□□ 1.48
EIF3C-214ENST00000569690 OSCARQ8IYS5 282 aa24.27■■□□□ 1.48
EIF3C-214ENST00000569690 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
EIF3C-214ENST00000569690 TOPBP1Q92547 1522 aa24.09■■□□□ 1.45
EIF3C-214ENST00000569690 IFT140Q96RY7 1462 aa24.07■■□□□ 1.44
EIF3C-214ENST00000569690 PRDM2Q13029 1718 aa24.05■■□□□ 1.44
EIF3C-214ENST00000569690 ABCC8Q09428 1581 aa24.02■■□□□ 1.44
EIF3C-214ENST00000569690 DNMBPQ6XZF7 1577 aa23.93■■□□□ 1.42
EIF3C-214ENST00000569690 AQRO60306 1485 aaKnown RBP eCLIP23.92■■□□□ 1.42
EIF3C-214ENST00000569690 POLA1P09884 1462 aaPredicted RBP23.84■■□□□ 1.41
EIF3C-214ENST00000569690 RAD54L2Q9Y4B4 1467 aa23.82■■□□□ 1.4
EIF3C-214ENST00000569690 TARBP1Q13395 1621 aaKnown RBP23.82■■□□□ 1.4
EIF3C-214ENST00000569690 SUPT5HO00267 1087 aaKnown RBP23.82■■□□□ 1.4
EIF3C-214ENST00000569690 FBLN2P98095 1184 aa23.82■■□□□ 1.4
EIF3C-214ENST00000569690 SOGA1O94964 1423 aa23.82■■□□□ 1.4
EIF3C-214ENST00000569690 TDRD9Q8NDG6 1382 aaKnown RBP23.8■■□□□ 1.4
EIF3C-214ENST00000569690 EIF4G3O43432 1585 aaKnown RBP23.8■■□□□ 1.4
EIF3C-214ENST00000569690 RIMBP3CA6NJZ7 1639 aa23.74■■□□□ 1.39
EIF3C-214ENST00000569690 RIMBP3BA6NNM3 1639 aa23.74■■□□□ 1.39
EIF3C-214ENST00000569690 RIMBP3Q9UFD9 1639 aa23.74■■□□□ 1.39
EIF3C-214ENST00000569690 CYB5RLQ6IPT4 315 aa23.73■■□□□ 1.39
EIF3C-214ENST00000569690 ARHGEF11O15085 1522 aa23.7■■□□□ 1.38
EIF3C-214ENST00000569690 FGD5Q6ZNL6 1462 aa23.69■■□□□ 1.38
EIF3C-214ENST00000569690 CUX1P39880 1505 aa23.68■■□□□ 1.38
EIF3C-214ENST00000569690 CHMP7Q8WUX9 453 aaPredicted RBP23.63■■□□□ 1.37
EIF3C-214ENST00000569690 CHD1O14646 1710 aa23.6■■□□□ 1.37
EIF3C-214ENST00000569690 SNAPC4Q5SXM2 1469 aa23.57■■□□□ 1.36
EIF3C-214ENST00000569690 GRIN2BQ13224 1484 aa23.53■■□□□ 1.36
EIF3C-214ENST00000569690 ARAP1Q96P48 1450 aa23.49■■□□□ 1.35
EIF3C-214ENST00000569690 MAGI1Q96QZ7 1491 aaPredicted RBP23.49■■□□□ 1.35
EIF3C-214ENST00000569690 WDR97A6NE52 1622 aa23.48■■□□□ 1.35
EIF3C-214ENST00000569690 GAPVD1Q14C86 1478 aa23.47■■□□□ 1.35
EIF3C-214ENST00000569690 SYNJ2O15056 1496 aa23.43■■□□□ 1.34
EIF3C-214ENST00000569690 TRHP20396 242 aaPredicted RBP23.43■■□□□ 1.34
EIF3C-214ENST00000569690 ABCA10Q8WWZ4 1543 aa23.42■■□□□ 1.34
EIF3C-214ENST00000569690 CLASP1Q7Z460 1538 aa23.4■■□□□ 1.34
EIF3C-214ENST00000569690 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
EIF3C-214ENST00000569690 SYNJ1O43426 1573 aa23.36■■□□□ 1.33
EIF3C-214ENST00000569690 ABCA5Q8WWZ7 1642 aa23.3■■□□□ 1.32
EIF3C-214ENST00000569690 PBRM1Q86U86 1689 aa23.27■■□□□ 1.32
EIF3C-214ENST00000569690 TOP2BQ02880 1626 aa23.24■■□□□ 1.31
EIF3C-214ENST00000569690 GRIN2AQ12879 1464 aa23.21■■□□□ 1.31
EIF3C-214ENST00000569690 BIVM-ERCC5R4GMW8 1640 aa23.19■■□□□ 1.3
EIF3C-214ENST00000569690 FHAD1B1AJZ9 1412 aa23.17■■□□□ 1.3
EIF3C-214ENST00000569690 NUP160Q12769 1436 aa23.16■■□□□ 1.3
EIF3C-214ENST00000569690 ADAMTS12P58397 1594 aa23.11■■□□□ 1.29
EIF3C-214ENST00000569690 ERCC6L2Q5T890 1561 aa23.11■■□□□ 1.29
EIF3C-214ENST00000569690 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
EIF3C-214ENST00000569690 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.29
EIF3C-214ENST00000569690 JPH4Q96JJ6 628 aa23.07■■□□□ 1.28
EIF3C-214ENST00000569690 PRG4Q92954 1404 aaPredicted RBP22.99■■□□□ 1.27
EIF3C-214ENST00000569690 IGF1RP08069 1367 aa22.98■■□□□ 1.27
EIF3C-214ENST00000569690 SHROOM2Q13796 1616 aa22.96■■□□□ 1.27
EIF3C-214ENST00000569690 KIF27Q86VH2 1401 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms