RNA–Protein interactions for RNA: ENST00000569681.5

CYLD-215, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-215ENST00000569681 NISCHQ9Y2I1 1504 aa53.35■■■■■ 6.13
CYLD-215ENST00000569681 ABCC9O60706 1549 aa48.03■■■■■ 5.28
CYLD-215ENST00000569681 CCDC180Q9P1Z9 1646 aa47.78■■■■■ 5.24
CYLD-215ENST00000569681 RB1CC1Q8TDY2 1594 aa45.58■■■■■ 4.89
CYLD-215ENST00000569681 NACADO15069 1562 aa45.24■■■■■ 4.83
CYLD-215ENST00000569681 DCAF8L2P0C7V8 631 aa45.21■■■■■ 4.83
CYLD-215ENST00000569681 DNAJC5BQ9UF47 199 aa45.18■■■■■ 4.82
CYLD-215ENST00000569681 PABPN1Q86U42 306 aaKnown RBP eCLIP44.78■■■■■ 4.76
CYLD-215ENST00000569681 MYO15BQ96JP2 1530 aa44.57■■■■■ 4.73
CYLD-215ENST00000569681 UNC13AQ9UPW8 1703 aa44.49■■■■■ 4.71
CYLD-215ENST00000569681 BICRAQ9NZM4 1560 aa44.3■■■■■ 4.68
CYLD-215ENST00000569681 ZCCHC6Q5VYS8 1495 aaKnown RBP44.19■■■■■ 4.66
CYLD-215ENST00000569681 DCAF1Q9Y4B6 1507 aa43.99■■■■■ 4.63
CYLD-215ENST00000569681 SCRIBQ14160 1630 aa43.66■■■■■ 4.58
CYLD-215ENST00000569681 SHROOM4Q9ULL8 1493 aa43.58■■■■■ 4.57
CYLD-215ENST00000569681 CC2D2AQ9P2K1 1620 aa43.31■■■■■ 4.52
CYLD-215ENST00000569681 CECR2Q9BXF3 1484 aa43.24■■■■■ 4.51
CYLD-215ENST00000569681 EIF4G1Q04637 1599 aaKnown RBP43.2■■■■■ 4.51
CYLD-215ENST00000569681 NCAPD3P42695 1498 aa41.82■■■■■ 4.29
CYLD-215ENST00000569681 ATAD2BQ9ULI0 1458 aa41.7■■■■■ 4.27
CYLD-215ENST00000569681 SMARCA4P51532 1647 aa41.6■■■■■ 4.25
CYLD-215ENST00000569681 SMARCA2P51531 1590 aa41.52■■■■■ 4.24
CYLD-215ENST00000569681 DNAJC5Q9H3Z4 198 aa41.46■■■■■ 4.23
CYLD-215ENST00000569681 HMGXB3Q12766 1538 aa41.45■■■■■ 4.23
CYLD-215ENST00000569681 ERCC6Q03468 1493 aa41.44■■■■■ 4.22
CYLD-215ENST00000569681 BAZ1AQ9NRL2 1556 aaPredicted RBP41.38■■■■■ 4.22
CYLD-215ENST00000569681 CUX2O14529 1486 aa41.32■■■■■ 4.2
CYLD-215ENST00000569681 BAZ1BQ9UIG0 1483 aaKnown RBP41.28■■■■■ 4.2
CYLD-215ENST00000569681 NESP48681 1621 aa41.25■■■■■ 4.19
CYLD-215ENST00000569681 PEG3Q9GZU2 1588 aa41.16■■■■■ 4.18
CYLD-215ENST00000569681 MROH2BQ7Z745 1585 aa41.15■■■■■ 4.18
CYLD-215ENST00000569681 LAMC3Q9Y6N6 1575 aa40.83■■■■■ 4.13
CYLD-215ENST00000569681 THOC2Q8NI27 1593 aaKnown RBP40.74■■■■■ 4.11
CYLD-215ENST00000569681 PDS5BQ9NTI5 1447 aa40.65■■■■■ 4.1
CYLD-215ENST00000569681 WIZO95785 1651 aa40.62■■■■■ 4.09
CYLD-215ENST00000569681 KIF21AQ7Z4S6 1674 aa40.61■■■■■ 4.09
CYLD-215ENST00000569681 CADPSQ9ULU8 1353 aa40.57■■■■■ 4.08
CYLD-215ENST00000569681 MRC2Q9UBG0 1479 aa40.31■■■■■ 4.04
CYLD-215ENST00000569681 RSF1Q96T23 1441 aaPredicted RBP40.29■■■■■ 4.04
CYLD-215ENST00000569681 WDR62O43379 1518 aa40.18■■■■■ 4.02
CYLD-215ENST00000569681 CEP164Q9UPV0 1460 aa40.13■■■■■ 4.02
CYLD-215ENST00000569681 FANCD2Q9BXW9 1451 aa40.11■■■■■ 4.01
CYLD-215ENST00000569681 CFTRP13569 1480 aa40.08■■■■■ 4.01
CYLD-215ENST00000569681 TOP2AP11388 1531 aaKnown RBP40.08■■■■■ 4.01
CYLD-215ENST00000569681 URB2Q14146 1524 aaKnown RBP39.8■■■■□ 3.96
CYLD-215ENST00000569681 TRIM41Q8WV44 630 aa39.69■■■■□ 3.94
CYLD-215ENST00000569681 CCDC88BA6NC98 1476 aa39.68■■■■□ 3.94
CYLD-215ENST00000569681 PRDM2Q13029 1718 aa39.51■■■■□ 3.91
CYLD-215ENST00000569681 OSCARQ8IYS5 282 aa39.5■■■■□ 3.91
CYLD-215ENST00000569681 ZNF608Q9ULD9 1512 aaPredicted RBP39.35■■■■□ 3.89
CYLD-215ENST00000569681 TOPBP1Q92547 1522 aa39.34■■■■□ 3.89
CYLD-215ENST00000569681 IFT140Q96RY7 1462 aa39.33■■■■□ 3.89
CYLD-215ENST00000569681 ABCC8Q09428 1581 aa39.18■■■■□ 3.86
CYLD-215ENST00000569681 DNMBPQ6XZF7 1577 aa39.15■■■■□ 3.86
CYLD-215ENST00000569681 EIF4G3O43432 1585 aaKnown RBP39.04■■■■□ 3.84
CYLD-215ENST00000569681 AQRO60306 1485 aaKnown RBP eCLIP38.98■■■■□ 3.83
CYLD-215ENST00000569681 TARBP1Q13395 1621 aaKnown RBP38.96■■■■□ 3.83
CYLD-215ENST00000569681 POLA1P09884 1462 aaPredicted RBP38.94■■■■□ 3.82
CYLD-215ENST00000569681 RIMBP3CA6NJZ7 1639 aa38.94■■■■□ 3.82
CYLD-215ENST00000569681 RIMBP3BA6NNM3 1639 aa38.94■■■■□ 3.82
CYLD-215ENST00000569681 RIMBP3Q9UFD9 1639 aa38.94■■■■□ 3.82
CYLD-215ENST00000569681 RAD54L2Q9Y4B4 1467 aa38.85■■■■□ 3.81
CYLD-215ENST00000569681 ARHGEF11O15085 1522 aa38.84■■■■□ 3.81
CYLD-215ENST00000569681 SOGA1O94964 1423 aa38.79■■■■□ 3.8
CYLD-215ENST00000569681 FBLN2P98095 1184 aa38.78■■■■□ 3.8
CYLD-215ENST00000569681 TDRD9Q8NDG6 1382 aaKnown RBP38.76■■■■□ 3.8
CYLD-215ENST00000569681 CHD1O14646 1710 aa38.73■■■■□ 3.79
CYLD-215ENST00000569681 FGD5Q6ZNL6 1462 aa38.69■■■■□ 3.78
CYLD-215ENST00000569681 CUX1P39880 1505 aa38.65■■■■□ 3.78
CYLD-215ENST00000569681 CYB5RLQ6IPT4 315 aa38.64■■■■□ 3.78
CYLD-215ENST00000569681 SUPT5HO00267 1087 aaKnown RBP38.56■■■■□ 3.76
CYLD-215ENST00000569681 SNAPC4Q5SXM2 1469 aa38.55■■■■□ 3.76
CYLD-215ENST00000569681 ARAP1Q96P48 1450 aa38.47■■■■□ 3.75
CYLD-215ENST00000569681 WDR97A6NE52 1622 aa38.46■■■■□ 3.75
CYLD-215ENST00000569681 CHMP7Q8WUX9 453 aaPredicted RBP38.45■■■■□ 3.75
CYLD-215ENST00000569681 GRIN2BQ13224 1484 aa38.41■■■■□ 3.74
CYLD-215ENST00000569681 MAGI1Q96QZ7 1491 aaPredicted RBP38.4■■■■□ 3.74
CYLD-215ENST00000569681 CLASP1Q7Z460 1538 aa38.33■■■■□ 3.73
CYLD-215ENST00000569681 SYNJ2O15056 1496 aa38.29■■■■□ 3.72
CYLD-215ENST00000569681 GAPVD1Q14C86 1478 aa38.28■■■■□ 3.72
CYLD-215ENST00000569681 SYNJ1O43426 1573 aa38.27■■■■□ 3.72
CYLD-215ENST00000569681 TRHP20396 242 aaPredicted RBP38.23■■■■□ 3.71
CYLD-215ENST00000569681 ABCA10Q8WWZ4 1543 aa38.22■■■■□ 3.71
CYLD-215ENST00000569681 PBRM1Q86U86 1689 aa38.18■■■■□ 3.7
CYLD-215ENST00000569681 ABCA5Q8WWZ7 1642 aa38.14■■■■□ 3.7
CYLD-215ENST00000569681 WRNQ14191 1432 aaPredicted RBP eCLIP38.08■■■■□ 3.69
CYLD-215ENST00000569681 TOP2BQ02880 1626 aa37.96■■■■□ 3.67
CYLD-215ENST00000569681 BIVM-ERCC5R4GMW8 1640 aa37.94■■■■□ 3.66
CYLD-215ENST00000569681 GRIN2AQ12879 1464 aa37.93■■■■□ 3.66
CYLD-215ENST00000569681 ADAMTS12P58397 1594 aa37.87■■■■□ 3.65
CYLD-215ENST00000569681 CEP170Q5SW79 1584 aa37.8■■■■□ 3.64
CYLD-215ENST00000569681 ERCC6L2Q5T890 1561 aa37.8■■■■□ 3.64
CYLD-215ENST00000569681 FHAD1B1AJZ9 1412 aa37.79■■■■□ 3.64
CYLD-215ENST00000569681 NUP160Q12769 1436 aa37.79■■■■□ 3.64
CYLD-215ENST00000569681 ERICH3Q5RHP9 1530 aa37.71■■■■□ 3.63
CYLD-215ENST00000569681 SHROOM2Q13796 1616 aa37.58■■■■□ 3.61
CYLD-215ENST00000569681 PRG4Q92954 1404 aaPredicted RBP37.48■■■■□ 3.59
CYLD-215ENST00000569681 JPH4Q96JJ6 628 aa37.47■■■■□ 3.59
CYLD-215ENST00000569681 RUSC2Q8N2Y8 1516 aa37.34■■■■□ 3.57
CYLD-215ENST00000569681 IGF1RP08069 1367 aa37.3■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms