RNA–Protein interactions for RNA: ENST00000569624.5

CDH11-217, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 584 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-217ENST00000569624 NISCHQ9Y2I1 1504 aa33.1■■■□□ 2.89
CDH11-217ENST00000569624 ABCC9O60706 1549 aa30.5■■■□□ 2.47
CDH11-217ENST00000569624 CCDC180Q9P1Z9 1646 aa30.04■■■□□ 2.4
CDH11-217ENST00000569624 DNAJC5BQ9UF47 199 aa29.12■■■□□ 2.25
CDH11-217ENST00000569624 RB1CC1Q8TDY2 1594 aa28.84■■■□□ 2.21
CDH11-217ENST00000569624 NACADO15069 1562 aa28.5■■■□□ 2.15
CDH11-217ENST00000569624 PABPN1Q86U42 306 aaKnown RBP eCLIP28.24■■■□□ 2.11
CDH11-217ENST00000569624 UNC13AQ9UPW8 1703 aa28.21■■■□□ 2.11
CDH11-217ENST00000569624 DCAF8L2P0C7V8 631 aa28.03■■■□□ 2.08
CDH11-217ENST00000569624 BICRAQ9NZM4 1560 aa28.03■■■□□ 2.08
CDH11-217ENST00000569624 MYO15BQ96JP2 1530 aa27.96■■■□□ 2.07
CDH11-217ENST00000569624 SHROOM4Q9ULL8 1493 aa27.66■■■□□ 2.02
CDH11-217ENST00000569624 CECR2Q9BXF3 1484 aa27.57■■■□□ 2
CDH11-217ENST00000569624 CC2D2AQ9P2K1 1620 aa27.57■■■□□ 2
CDH11-217ENST00000569624 EIF4G1Q04637 1599 aaKnown RBP27.38■■□□□ 1.97
CDH11-217ENST00000569624 DCAF1Q9Y4B6 1507 aa27.36■■□□□ 1.97
CDH11-217ENST00000569624 ZCCHC6Q5VYS8 1495 aaKnown RBP27.32■■□□□ 1.96
CDH11-217ENST00000569624 SCRIBQ14160 1630 aa27.24■■□□□ 1.95
CDH11-217ENST00000569624 DNAJC5Q9H3Z4 198 aa27.22■■□□□ 1.95
CDH11-217ENST00000569624 CUX2O14529 1486 aa26.62■■□□□ 1.85
CDH11-217ENST00000569624 ERCC6Q03468 1493 aa26.4■■□□□ 1.82
CDH11-217ENST00000569624 NCAPD3P42695 1498 aa26.3■■□□□ 1.8
CDH11-217ENST00000569624 ATAD2BQ9ULI0 1458 aa26.11■■□□□ 1.77
CDH11-217ENST00000569624 HMGXB3Q12766 1538 aa26.09■■□□□ 1.77
CDH11-217ENST00000569624 SMARCA2P51531 1590 aa26.04■■□□□ 1.76
CDH11-217ENST00000569624 NESP48681 1621 aa26.04■■□□□ 1.76
CDH11-217ENST00000569624 THOC2Q8NI27 1593 aaKnown RBP25.97■■□□□ 1.75
CDH11-217ENST00000569624 SMARCA4P51532 1647 aa25.96■■□□□ 1.75
CDH11-217ENST00000569624 BAZ1BQ9UIG0 1483 aaKnown RBP25.84■■□□□ 1.73
CDH11-217ENST00000569624 LAMC3Q9Y6N6 1575 aa25.83■■□□□ 1.73
CDH11-217ENST00000569624 PEG3Q9GZU2 1588 aa25.76■■□□□ 1.71
CDH11-217ENST00000569624 BAZ1AQ9NRL2 1556 aaPredicted RBP25.75■■□□□ 1.71
CDH11-217ENST00000569624 KIF21AQ7Z4S6 1674 aa25.74■■□□□ 1.71
CDH11-217ENST00000569624 TRIM41Q8WV44 630 aa25.7■■□□□ 1.7
CDH11-217ENST00000569624 PDS5BQ9NTI5 1447 aa25.67■■□□□ 1.7
CDH11-217ENST00000569624 MRC2Q9UBG0 1479 aa25.49■■□□□ 1.67
CDH11-217ENST00000569624 MROH2BQ7Z745 1585 aa25.48■■□□□ 1.67
CDH11-217ENST00000569624 WDR62O43379 1518 aa25.47■■□□□ 1.67
CDH11-217ENST00000569624 CADPSQ9ULU8 1353 aa25.45■■□□□ 1.67
CDH11-217ENST00000569624 CEP164Q9UPV0 1460 aa25.26■■□□□ 1.63
CDH11-217ENST00000569624 OSCARQ8IYS5 282 aa25.21■■□□□ 1.63
CDH11-217ENST00000569624 FANCD2Q9BXW9 1451 aa25.16■■□□□ 1.62
CDH11-217ENST00000569624 WIZO95785 1651 aa25.14■■□□□ 1.62
CDH11-217ENST00000569624 CFTRP13569 1480 aa25.06■■□□□ 1.6
CDH11-217ENST00000569624 RIMBP3CA6NJZ7 1639 aa25.01■■□□□ 1.59
CDH11-217ENST00000569624 RIMBP3BA6NNM3 1639 aa25.01■■□□□ 1.59
CDH11-217ENST00000569624 RIMBP3Q9UFD9 1639 aa25.01■■□□□ 1.59
CDH11-217ENST00000569624 URB2Q14146 1524 aaKnown RBP25.01■■□□□ 1.59
CDH11-217ENST00000569624 ARHGEF11O15085 1522 aa24.87■■□□□ 1.57
CDH11-217ENST00000569624 PRDM2Q13029 1718 aa24.82■■□□□ 1.56
CDH11-217ENST00000569624 TOP2AP11388 1531 aaKnown RBP24.81■■□□□ 1.56
CDH11-217ENST00000569624 IFT140Q96RY7 1462 aa24.78■■□□□ 1.56
CDH11-217ENST00000569624 ZNF608Q9ULD9 1512 aaPredicted RBP24.77■■□□□ 1.56
CDH11-217ENST00000569624 RSF1Q96T23 1441 aaPredicted RBP24.72■■□□□ 1.55
CDH11-217ENST00000569624 EIF4G3O43432 1585 aaKnown RBP24.66■■□□□ 1.54
CDH11-217ENST00000569624 TOPBP1Q92547 1522 aa24.63■■□□□ 1.53
CDH11-217ENST00000569624 CYB5RLQ6IPT4 315 aa24.63■■□□□ 1.53
CDH11-217ENST00000569624 ARAP1Q96P48 1450 aa24.58■■□□□ 1.53
CDH11-217ENST00000569624 CHD1O14646 1710 aa24.58■■□□□ 1.53
CDH11-217ENST00000569624 ABCC8Q09428 1581 aa24.55■■□□□ 1.52
CDH11-217ENST00000569624 TRHP20396 242 aaPredicted RBP24.54■■□□□ 1.52
CDH11-217ENST00000569624 DNMBPQ6XZF7 1577 aa24.51■■□□□ 1.51
CDH11-217ENST00000569624 CCDC88BA6NC98 1476 aa24.5■■□□□ 1.51
CDH11-217ENST00000569624 TARBP1Q13395 1621 aaKnown RBP24.48■■□□□ 1.51
CDH11-217ENST00000569624 AQRO60306 1485 aaKnown RBP eCLIP24.45■■□□□ 1.51
CDH11-217ENST00000569624 FBLN2P98095 1184 aa24.36■■□□□ 1.49
CDH11-217ENST00000569624 POLA1P09884 1462 aaPredicted RBP24.34■■□□□ 1.49
CDH11-217ENST00000569624 CLASP1Q7Z460 1538 aa24.3■■□□□ 1.48
CDH11-217ENST00000569624 AEBP2Q6ZN18 517 aaPredicted RBP24.28■■□□□ 1.48
CDH11-217ENST00000569624 WDR97A6NE52 1622 aa24.24■■□□□ 1.47
CDH11-217ENST00000569624 SYNJ1O43426 1573 aa24.22■■□□□ 1.47
CDH11-217ENST00000569624 SNAPC4Q5SXM2 1469 aa24.22■■□□□ 1.47
CDH11-217ENST00000569624 RAD54L2Q9Y4B4 1467 aa24.22■■□□□ 1.47
CDH11-217ENST00000569624 TDRD9Q8NDG6 1382 aaKnown RBP24.19■■□□□ 1.46
CDH11-217ENST00000569624 SOGA1O94964 1423 aa24.18■■□□□ 1.46
CDH11-217ENST00000569624 MAGI1Q96QZ7 1491 aaPredicted RBP24.17■■□□□ 1.46
CDH11-217ENST00000569624 CHMP7Q8WUX9 453 aaPredicted RBP24.11■■□□□ 1.45
CDH11-217ENST00000569624 FGD5Q6ZNL6 1462 aa24.09■■□□□ 1.45
CDH11-217ENST00000569624 SYNJ2O15056 1496 aa24.08■■□□□ 1.45
CDH11-217ENST00000569624 GRIN2BQ13224 1484 aa24.07■■□□□ 1.44
CDH11-217ENST00000569624 GAPVD1Q14C86 1478 aa24.05■■□□□ 1.44
CDH11-217ENST00000569624 CUX1P39880 1505 aa23.98■■□□□ 1.43
CDH11-217ENST00000569624 PBRM1Q86U86 1689 aa23.97■■□□□ 1.43
CDH11-217ENST00000569624 ABCA5Q8WWZ7 1642 aa23.85■■□□□ 1.41
CDH11-217ENST00000569624 ERCC6L2Q5T890 1561 aa23.83■■□□□ 1.41
CDH11-217ENST00000569624 ABCA10Q8WWZ4 1543 aa23.81■■□□□ 1.4
CDH11-217ENST00000569624 GRIN2AQ12879 1464 aa23.77■■□□□ 1.4
CDH11-217ENST00000569624 CEP170Q5SW79 1584 aa23.76■■□□□ 1.39
CDH11-217ENST00000569624 KIF13AQ9H1H9 1805 aa23.73■■□□□ 1.39
CDH11-217ENST00000569624 NUP160Q12769 1436 aa23.73■■□□□ 1.39
CDH11-217ENST00000569624 SHROOM2Q13796 1616 aa23.73■■□□□ 1.39
CDH11-217ENST00000569624 ADAMTS12P58397 1594 aa23.71■■□□□ 1.39
CDH11-217ENST00000569624 FHAD1B1AJZ9 1412 aa23.58■■□□□ 1.36
CDH11-217ENST00000569624 WRNQ14191 1432 aaPredicted RBP eCLIP23.57■■□□□ 1.36
CDH11-217ENST00000569624 ERICH3Q5RHP9 1530 aa23.51■■□□□ 1.35
CDH11-217ENST00000569624 PRG4Q92954 1404 aaPredicted RBP23.5■■□□□ 1.35
CDH11-217ENST00000569624 ABCC10Q5T3U5 1492 aa23.5■■□□□ 1.35
CDH11-217ENST00000569624 MAPKBP1O60336 1514 aa23.48■■□□□ 1.35
CDH11-217ENST00000569624 BIVM-ERCC5R4GMW8 1640 aa23.48■■□□□ 1.35
CDH11-217ENST00000569624 TOP2BQ02880 1626 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms