RNA–Protein interactions for RNA: ENST00000569615.2

UTP4-215, Transcript of UTP4, small subunit processome component, humanhuman

TSL 3

Gene UTP4, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4-215ENST00000569615 NISCHQ9Y2I1 1504 aa31.12■■■□□ 2.57
UTP4-215ENST00000569615 CCDC180Q9P1Z9 1646 aa27.78■■■□□ 2.04
UTP4-215ENST00000569615 ABCC9O60706 1549 aa27.4■■□□□ 1.98
UTP4-215ENST00000569615 RB1CC1Q8TDY2 1594 aa26.32■■□□□ 1.8
UTP4-215ENST00000569615 NACADO15069 1562 aa26.23■■□□□ 1.79
UTP4-215ENST00000569615 DCAF8L2P0C7V8 631 aa26.17■■□□□ 1.78
UTP4-215ENST00000569615 MYO15BQ96JP2 1530 aa26.01■■□□□ 1.75
UTP4-215ENST00000569615 ZCCHC6Q5VYS8 1495 aaKnown RBP25.85■■□□□ 1.73
UTP4-215ENST00000569615 DCAF1Q9Y4B6 1507 aa25.78■■□□□ 1.72
UTP4-215ENST00000569615 PABPN1Q86U42 306 aaKnown RBP eCLIP25.56■■□□□ 1.68
UTP4-215ENST00000569615 UNC13AQ9UPW8 1703 aa25.54■■□□□ 1.68
UTP4-215ENST00000569615 BICRAQ9NZM4 1560 aa25.4■■□□□ 1.66
UTP4-215ENST00000569615 SHROOM4Q9ULL8 1493 aa25.3■■□□□ 1.64
UTP4-215ENST00000569615 DNAJC5BQ9UF47 199 aa25.3■■□□□ 1.64
UTP4-215ENST00000569615 SCRIBQ14160 1630 aa25.28■■□□□ 1.64
UTP4-215ENST00000569615 EIF4G1Q04637 1599 aaKnown RBP24.82■■□□□ 1.56
UTP4-215ENST00000569615 CC2D2AQ9P2K1 1620 aa24.76■■□□□ 1.55
UTP4-215ENST00000569615 CECR2Q9BXF3 1484 aa24.7■■□□□ 1.54
UTP4-215ENST00000569615 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
UTP4-215ENST00000569615 BAZ1AQ9NRL2 1556 aaPredicted RBP24.18■■□□□ 1.46
UTP4-215ENST00000569615 SMARCA4P51532 1647 aa24.17■■□□□ 1.46
UTP4-215ENST00000569615 SMARCA2P51531 1590 aa24.16■■□□□ 1.46
UTP4-215ENST00000569615 ATAD2BQ9ULI0 1458 aa24.13■■□□□ 1.45
UTP4-215ENST00000569615 HMGXB3Q12766 1538 aa24.05■■□□□ 1.44
UTP4-215ENST00000569615 PEG3Q9GZU2 1588 aa23.97■■□□□ 1.43
UTP4-215ENST00000569615 BAZ1BQ9UIG0 1483 aaKnown RBP23.96■■□□□ 1.43
UTP4-215ENST00000569615 MROH2BQ7Z745 1585 aa23.92■■□□□ 1.42
UTP4-215ENST00000569615 ERCC6Q03468 1493 aa23.74■■□□□ 1.39
UTP4-215ENST00000569615 WIZO95785 1651 aa23.63■■□□□ 1.37
UTP4-215ENST00000569615 LAMC3Q9Y6N6 1575 aa23.61■■□□□ 1.37
UTP4-215ENST00000569615 RSF1Q96T23 1441 aaPredicted RBP23.6■■□□□ 1.37
UTP4-215ENST00000569615 NESP48681 1621 aa23.59■■□□□ 1.37
UTP4-215ENST00000569615 CUX2O14529 1486 aa23.56■■□□□ 1.36
UTP4-215ENST00000569615 PDS5BQ9NTI5 1447 aa23.51■■□□□ 1.35
UTP4-215ENST00000569615 CADPSQ9ULU8 1353 aa23.49■■□□□ 1.35
UTP4-215ENST00000569615 TOP2AP11388 1531 aaKnown RBP23.44■■□□□ 1.34
UTP4-215ENST00000569615 KIF21AQ7Z4S6 1674 aa23.3■■□□□ 1.32
UTP4-215ENST00000569615 THOC2Q8NI27 1593 aaKnown RBP23.3■■□□□ 1.32
UTP4-215ENST00000569615 CFTRP13569 1480 aa23.27■■□□□ 1.32
UTP4-215ENST00000569615 MRC2Q9UBG0 1479 aa23.22■■□□□ 1.31
UTP4-215ENST00000569615 CEP164Q9UPV0 1460 aa23.22■■□□□ 1.31
UTP4-215ENST00000569615 FANCD2Q9BXW9 1451 aa23.2■■□□□ 1.3
UTP4-215ENST00000569615 CCDC88BA6NC98 1476 aa23.15■■□□□ 1.3
UTP4-215ENST00000569615 DNAJC5Q9H3Z4 198 aa23.12■■□□□ 1.29
UTP4-215ENST00000569615 WDR62O43379 1518 aa23.12■■□□□ 1.29
UTP4-215ENST00000569615 PRDM2Q13029 1718 aa23.02■■□□□ 1.28
UTP4-215ENST00000569615 URB2Q14146 1524 aaKnown RBP22.92■■□□□ 1.26
UTP4-215ENST00000569615 ABCC8Q09428 1581 aa22.87■■□□□ 1.25
UTP4-215ENST00000569615 SUPT5HO00267 1087 aaKnown RBP22.85■■□□□ 1.25
UTP4-215ENST00000569615 TOPBP1Q92547 1522 aa22.77■■□□□ 1.24
UTP4-215ENST00000569615 IFT140Q96RY7 1462 aa22.75■■□□□ 1.23
UTP4-215ENST00000569615 DNMBPQ6XZF7 1577 aa22.74■■□□□ 1.23
UTP4-215ENST00000569615 OSCARQ8IYS5 282 aa22.58■■□□□ 1.21
UTP4-215ENST00000569615 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
UTP4-215ENST00000569615 POLA1P09884 1462 aaPredicted RBP22.56■■□□□ 1.2
UTP4-215ENST00000569615 TARBP1Q13395 1621 aaKnown RBP22.5■■□□□ 1.19
UTP4-215ENST00000569615 SOGA1O94964 1423 aa22.5■■□□□ 1.19
UTP4-215ENST00000569615 EIF4G3O43432 1585 aaKnown RBP22.49■■□□□ 1.19
UTP4-215ENST00000569615 FGD5Q6ZNL6 1462 aa22.47■■□□□ 1.19
UTP4-215ENST00000569615 CUX1P39880 1505 aa22.47■■□□□ 1.19
UTP4-215ENST00000569615 AQRO60306 1485 aaKnown RBP eCLIP22.44■■□□□ 1.18
UTP4-215ENST00000569615 RAD54L2Q9Y4B4 1467 aa22.43■■□□□ 1.18
UTP4-215ENST00000569615 WDR97A6NE52 1622 aa22.42■■□□□ 1.18
UTP4-215ENST00000569615 TDRD9Q8NDG6 1382 aaKnown RBP22.38■■□□□ 1.17
UTP4-215ENST00000569615 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.16
UTP4-215ENST00000569615 FBLN2P98095 1184 aa22.31■■□□□ 1.16
UTP4-215ENST00000569615 GRIN2BQ13224 1484 aa22.28■■□□□ 1.16
UTP4-215ENST00000569615 ABCA10Q8WWZ4 1543 aa22.26■■□□□ 1.15
UTP4-215ENST00000569615 MAGI1Q96QZ7 1491 aaPredicted RBP22.26■■□□□ 1.15
UTP4-215ENST00000569615 TRIM41Q8WV44 630 aa22.25■■□□□ 1.15
UTP4-215ENST00000569615 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
UTP4-215ENST00000569615 GAPVD1Q14C86 1478 aa22.24■■□□□ 1.15
UTP4-215ENST00000569615 SNAPC4Q5SXM2 1469 aa22.24■■□□□ 1.15
UTP4-215ENST00000569615 CHMP7Q8WUX9 453 aaPredicted RBP22.23■■□□□ 1.15
UTP4-215ENST00000569615 BIVM-ERCC5R4GMW8 1640 aa22.22■■□□□ 1.15
UTP4-215ENST00000569615 CHD1O14646 1710 aa22.22■■□□□ 1.15
UTP4-215ENST00000569615 SYNJ1O43426 1573 aa22.17■■□□□ 1.14
UTP4-215ENST00000569615 SYNJ2O15056 1496 aa22.16■■□□□ 1.14
UTP4-215ENST00000569615 ABCA5Q8WWZ7 1642 aa22.14■■□□□ 1.14
UTP4-215ENST00000569615 PBRM1Q86U86 1689 aa22.13■■□□□ 1.13
UTP4-215ENST00000569615 ARHGEF11O15085 1522 aa22.12■■□□□ 1.13
UTP4-215ENST00000569615 RIMBP3CA6NJZ7 1639 aa22.11■■□□□ 1.13
UTP4-215ENST00000569615 RIMBP3BA6NNM3 1639 aa22.11■■□□□ 1.13
UTP4-215ENST00000569615 RIMBP3Q9UFD9 1639 aa22.11■■□□□ 1.13
UTP4-215ENST00000569615 ERICH3Q5RHP9 1530 aa22.02■■□□□ 1.12
UTP4-215ENST00000569615 CLASP1Q7Z460 1538 aa22.01■■□□□ 1.11
UTP4-215ENST00000569615 FHAD1B1AJZ9 1412 aa21.99■■□□□ 1.11
UTP4-215ENST00000569615 CYB5RLQ6IPT4 315 aa21.98■■□□□ 1.11
UTP4-215ENST00000569615 GRIN2AQ12879 1464 aa21.96■■□□□ 1.11
UTP4-215ENST00000569615 ADAMTS12P58397 1594 aa21.96■■□□□ 1.11
UTP4-215ENST00000569615 KIF27Q86VH2 1401 aa21.9■■□□□ 1.1
UTP4-215ENST00000569615 ARAP1Q96P48 1450 aa21.9■■□□□ 1.1
UTP4-215ENST00000569615 NUP160Q12769 1436 aa21.88■■□□□ 1.09
UTP4-215ENST00000569615 CEP170Q5SW79 1584 aa21.8■■□□□ 1.08
UTP4-215ENST00000569615 IGF1RP08069 1367 aa21.78■■□□□ 1.08
UTP4-215ENST00000569615 CUL7Q14999 1698 aa21.76■■□□□ 1.07
UTP4-215ENST00000569615 JPH4Q96JJ6 628 aa21.7■■□□□ 1.06
UTP4-215ENST00000569615 SHROOM2Q13796 1616 aa21.69■■□□□ 1.06
UTP4-215ENST00000569615 CARMIL1Q5VZK9 1371 aa21.69■■□□□ 1.06
UTP4-215ENST00000569615 TRHP20396 242 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms