RNA–Protein interactions for RNA: ENST00000569566.2

MSLN-208, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 550 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-208ENST00000569566 NISCHQ9Y2I1 1504 aa46.54■■■■■ 5.04
MSLN-208ENST00000569566 CCDC180Q9P1Z9 1646 aa41.92■■■■■ 4.3
MSLN-208ENST00000569566 ABCC9O60706 1549 aa41.33■■■■■ 4.21
MSLN-208ENST00000569566 RB1CC1Q8TDY2 1594 aa39.57■■■■□ 3.92
MSLN-208ENST00000569566 NACADO15069 1562 aa39.34■■■■□ 3.89
MSLN-208ENST00000569566 UNC13AQ9UPW8 1703 aa39.03■■■■□ 3.84
MSLN-208ENST00000569566 MYO15BQ96JP2 1530 aa38.92■■■■□ 3.82
MSLN-208ENST00000569566 ZCCHC6Q5VYS8 1495 aaKnown RBP38.73■■■■□ 3.79
MSLN-208ENST00000569566 DCAF8L2P0C7V8 631 aa38.65■■■■□ 3.78
MSLN-208ENST00000569566 BICRAQ9NZM4 1560 aa38.53■■■■□ 3.76
MSLN-208ENST00000569566 DCAF1Q9Y4B6 1507 aa38.53■■■■□ 3.76
MSLN-208ENST00000569566 DNAJC5BQ9UF47 199 aa38.38■■■■□ 3.73
MSLN-208ENST00000569566 PABPN1Q86U42 306 aaKnown RBP eCLIP38.29■■■■□ 3.72
MSLN-208ENST00000569566 SCRIBQ14160 1630 aa38.08■■■■□ 3.69
MSLN-208ENST00000569566 SHROOM4Q9ULL8 1493 aa37.96■■■■□ 3.67
MSLN-208ENST00000569566 CC2D2AQ9P2K1 1620 aa37.5■■■■□ 3.59
MSLN-208ENST00000569566 EIF4G1Q04637 1599 aaKnown RBP37.48■■■■□ 3.59
MSLN-208ENST00000569566 CECR2Q9BXF3 1484 aa37.19■■■■□ 3.54
MSLN-208ENST00000569566 SMARCA4P51532 1647 aa36.39■■■■□ 3.42
MSLN-208ENST00000569566 NCAPD3P42695 1498 aa36.22■■■■□ 3.39
MSLN-208ENST00000569566 ATAD2BQ9ULI0 1458 aa36.18■■■■□ 3.38
MSLN-208ENST00000569566 HMGXB3Q12766 1538 aa36.17■■■■□ 3.38
MSLN-208ENST00000569566 SMARCA2P51531 1590 aa36.15■■■■□ 3.38
MSLN-208ENST00000569566 BAZ1AQ9NRL2 1556 aaPredicted RBP36.14■■■■□ 3.38
MSLN-208ENST00000569566 PEG3Q9GZU2 1588 aa36.04■■■■□ 3.36
MSLN-208ENST00000569566 MROH2BQ7Z745 1585 aa35.89■■■■□ 3.34
MSLN-208ENST00000569566 BAZ1BQ9UIG0 1483 aaKnown RBP35.85■■■■□ 3.33
MSLN-208ENST00000569566 NESP48681 1621 aa35.65■■■■□ 3.3
MSLN-208ENST00000569566 ERCC6Q03468 1493 aa35.6■■■■□ 3.29
MSLN-208ENST00000569566 WIZO95785 1651 aa35.57■■■■□ 3.28
MSLN-208ENST00000569566 CUX2O14529 1486 aa35.56■■■■□ 3.28
MSLN-208ENST00000569566 LAMC3Q9Y6N6 1575 aa35.51■■■■□ 3.27
MSLN-208ENST00000569566 THOC2Q8NI27 1593 aaKnown RBP35.46■■■■□ 3.27
MSLN-208ENST00000569566 KIF21AQ7Z4S6 1674 aa35.43■■■■□ 3.26
MSLN-208ENST00000569566 RSF1Q96T23 1441 aaPredicted RBP35.13■■■■□ 3.21
MSLN-208ENST00000569566 TOP2AP11388 1531 aaKnown RBP35.11■■■■□ 3.21
MSLN-208ENST00000569566 PDS5BQ9NTI5 1447 aa35.06■■■■□ 3.2
MSLN-208ENST00000569566 CADPSQ9ULU8 1353 aa35.03■■■■□ 3.2
MSLN-208ENST00000569566 DNAJC5Q9H3Z4 198 aa34.98■■■■□ 3.19
MSLN-208ENST00000569566 PRDM2Q13029 1718 aa34.93■■■■□ 3.18
MSLN-208ENST00000569566 WDR62O43379 1518 aa34.91■■■■□ 3.18
MSLN-208ENST00000569566 MRC2Q9UBG0 1479 aa34.89■■■■□ 3.18
MSLN-208ENST00000569566 CFTRP13569 1480 aa34.82■■■■□ 3.16
MSLN-208ENST00000569566 CEP164Q9UPV0 1460 aa34.8■■■■□ 3.16
MSLN-208ENST00000569566 FANCD2Q9BXW9 1451 aa34.75■■■■□ 3.15
MSLN-208ENST00000569566 CCDC88BA6NC98 1476 aa34.54■■■■□ 3.12
MSLN-208ENST00000569566 URB2Q14146 1524 aaKnown RBP34.54■■■■□ 3.12
MSLN-208ENST00000569566 TOPBP1Q92547 1522 aa34.19■■■■□ 3.06
MSLN-208ENST00000569566 DNMBPQ6XZF7 1577 aa34.15■■■■□ 3.06
MSLN-208ENST00000569566 IFT140Q96RY7 1462 aa34.04■■■■□ 3.04
MSLN-208ENST00000569566 EIF4G3O43432 1585 aaKnown RBP34.03■■■■□ 3.04
MSLN-208ENST00000569566 ZNF608Q9ULD9 1512 aaPredicted RBP34.02■■■■□ 3.04
MSLN-208ENST00000569566 ABCC8Q09428 1581 aa34.01■■■■□ 3.03
MSLN-208ENST00000569566 TARBP1Q13395 1621 aaKnown RBP33.99■■■■□ 3.03
MSLN-208ENST00000569566 POLA1P09884 1462 aaPredicted RBP33.85■■■■□ 3.01
MSLN-208ENST00000569566 CHD1O14646 1710 aa33.81■■■■□ 3
MSLN-208ENST00000569566 WDR97A6NE52 1622 aa33.74■■■□□ 2.99
MSLN-208ENST00000569566 CUX1P39880 1505 aa33.74■■■□□ 2.99
MSLN-208ENST00000569566 FGD5Q6ZNL6 1462 aa33.67■■■□□ 2.98
MSLN-208ENST00000569566 RAD54L2Q9Y4B4 1467 aa33.64■■■□□ 2.98
MSLN-208ENST00000569566 OSCARQ8IYS5 282 aa33.64■■■□□ 2.98
MSLN-208ENST00000569566 RIMBP3CA6NJZ7 1639 aa33.64■■■□□ 2.98
MSLN-208ENST00000569566 RIMBP3BA6NNM3 1639 aa33.64■■■□□ 2.98
MSLN-208ENST00000569566 RIMBP3Q9UFD9 1639 aa33.64■■■□□ 2.98
MSLN-208ENST00000569566 AQRO60306 1485 aaKnown RBP eCLIP33.63■■■□□ 2.97
MSLN-208ENST00000569566 PBRM1Q86U86 1689 aa33.52■■■□□ 2.96
MSLN-208ENST00000569566 SOGA1O94964 1423 aa33.51■■■□□ 2.95
MSLN-208ENST00000569566 TRIM41Q8WV44 630 aa33.49■■■□□ 2.95
MSLN-208ENST00000569566 ARHGEF11O15085 1522 aa33.48■■■□□ 2.95
MSLN-208ENST00000569566 SUPT5HO00267 1087 aaKnown RBP33.47■■■□□ 2.95
MSLN-208ENST00000569566 SNAPC4Q5SXM2 1469 aa33.42■■■□□ 2.94
MSLN-208ENST00000569566 ABCA5Q8WWZ7 1642 aa33.42■■■□□ 2.94
MSLN-208ENST00000569566 BIVM-ERCC5R4GMW8 1640 aa33.41■■■□□ 2.94
MSLN-208ENST00000569566 TDRD9Q8NDG6 1382 aaKnown RBP33.4■■■□□ 2.94
MSLN-208ENST00000569566 MAGI1Q96QZ7 1491 aaPredicted RBP33.33■■■□□ 2.93
MSLN-208ENST00000569566 CLASP1Q7Z460 1538 aa33.31■■■□□ 2.92
MSLN-208ENST00000569566 TOP2BQ02880 1626 aa33.31■■■□□ 2.92
MSLN-208ENST00000569566 SYNJ1O43426 1573 aa33.3■■■□□ 2.92
MSLN-208ENST00000569566 ABCA10Q8WWZ4 1543 aa33.3■■■□□ 2.92
MSLN-208ENST00000569566 GRIN2BQ13224 1484 aa33.3■■■□□ 2.92
MSLN-208ENST00000569566 GAPVD1Q14C86 1478 aa33.2■■■□□ 2.91
MSLN-208ENST00000569566 SYNJ2O15056 1496 aa33.19■■■□□ 2.9
MSLN-208ENST00000569566 ARAP1Q96P48 1450 aa33.18■■■□□ 2.9
MSLN-208ENST00000569566 ADAMTS12P58397 1594 aa33.13■■■□□ 2.89
MSLN-208ENST00000569566 WRNQ14191 1432 aaPredicted RBP eCLIP33.12■■■□□ 2.89
MSLN-208ENST00000569566 FBLN2P98095 1184 aa33.11■■■□□ 2.89
MSLN-208ENST00000569566 GRIN2AQ12879 1464 aa32.94■■■□□ 2.86
MSLN-208ENST00000569566 CHMP7Q8WUX9 453 aaPredicted RBP32.93■■■□□ 2.86
MSLN-208ENST00000569566 CEP170Q5SW79 1584 aa32.92■■■□□ 2.86
MSLN-208ENST00000569566 ERICH3Q5RHP9 1530 aa32.91■■■□□ 2.86
MSLN-208ENST00000569566 CYB5RLQ6IPT4 315 aa32.84■■■□□ 2.85
MSLN-208ENST00000569566 SHROOM2Q13796 1616 aa32.83■■■□□ 2.85
MSLN-208ENST00000569566 NUP160Q12769 1436 aa32.82■■■□□ 2.84
MSLN-208ENST00000569566 ERCC6L2Q5T890 1561 aa32.79■■■□□ 2.84
MSLN-208ENST00000569566 FHAD1B1AJZ9 1412 aa32.77■■■□□ 2.84
MSLN-208ENST00000569566 RUSC2Q8N2Y8 1516 aa32.68■■■□□ 2.82
MSLN-208ENST00000569566 CUL7Q14999 1698 aa32.6■■■□□ 2.81
MSLN-208ENST00000569566 KIF27Q86VH2 1401 aa32.42■■■□□ 2.78
MSLN-208ENST00000569566 TRHP20396 242 aaPredicted RBP32.34■■■□□ 2.77
MSLN-208ENST00000569566 PRG4Q92954 1404 aaPredicted RBP32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms