RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 AEBP2Q6ZN18 517 aaPredicted RBP25.66■■□□□ 1.7
TCF4-243ENST00000569357 CHIC1Q5VXU3 224 aa23.81■■□□□ 1.4
TCF4-243ENST00000569357 NISCHQ9Y2I1 1504 aa23.26■■□□□ 1.31
TCF4-243ENST00000569357 SENP3Q9H4L4 574 aaPredicted RBP21.82■■□□□ 1.08
TCF4-243ENST00000569357 ABCC9O60706 1549 aa21.81■■□□□ 1.08
TCF4-243ENST00000569357 PHF23Q9BUL5 403 aaPredicted RBP21.53■■□□□ 1.04
TCF4-243ENST00000569357 CCDC180Q9P1Z9 1646 aa21.04■□□□□ 0.96
TCF4-243ENST00000569357 DNAJC5BQ9UF47 199 aa21■□□□□ 0.95
TCF4-243ENST00000569357 FOXD1Q16676 465 aa20.52■□□□□ 0.88
TCF4-243ENST00000569357 RB1CC1Q8TDY2 1594 aa20.4■□□□□ 0.86
TCF4-243ENST00000569357 PABPN1Q86U42 306 aaKnown RBP eCLIP20.29■□□□□ 0.84
TCF4-243ENST00000569357 DCAF8L2P0C7V8 631 aa20.17■□□□□ 0.82
TCF4-243ENST00000569357 NACADO15069 1562 aa20.09■□□□□ 0.81
TCF4-243ENST00000569357 POTEDQ86YR6 584 aa19.9■□□□□ 0.78
TCF4-243ENST00000569357 UNC13AQ9UPW8 1703 aa19.85■□□□□ 0.77
TCF4-243ENST00000569357 BICRAQ9NZM4 1560 aa19.78■□□□□ 0.76
TCF4-243ENST00000569357 DNAJC5Q9H3Z4 198 aa19.7■□□□□ 0.74
TCF4-243ENST00000569357 CECR2Q9BXF3 1484 aa19.68■□□□□ 0.74
TCF4-243ENST00000569357 CC2D2AQ9P2K1 1620 aa19.59■□□□□ 0.73
TCF4-243ENST00000569357 MYO15BQ96JP2 1530 aa19.55■□□□□ 0.72
TCF4-243ENST00000569357 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
TCF4-243ENST00000569357 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
TCF4-243ENST00000569357 MSH5O43196 834 aa19.29■□□□□ 0.68
TCF4-243ENST00000569357 SCRIBQ14160 1630 aa19.26■□□□□ 0.67
TCF4-243ENST00000569357 ZCCHC6Q5VYS8 1495 aaKnown RBP19.13■□□□□ 0.65
TCF4-243ENST00000569357 DCAF1Q9Y4B6 1507 aa19.09■□□□□ 0.65
TCF4-243ENST00000569357 PIAS4Q8N2W9 510 aaPredicted RBP19■□□□□ 0.63
TCF4-243ENST00000569357 CUX2O14529 1486 aa18.95■□□□□ 0.62
TCF4-243ENST00000569357 ERCC6Q03468 1493 aa18.89■□□□□ 0.61
TCF4-243ENST00000569357 PPP6R1Q9UPN7 881 aa18.81■□□□□ 0.6
TCF4-243ENST00000569357 TRIM41Q8WV44 630 aa18.73■□□□□ 0.59
TCF4-243ENST00000569357 ADRA2BP18089 450 aa18.7■□□□□ 0.58
TCF4-243ENST00000569357 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.57
TCF4-243ENST00000569357 NCAPD3P42695 1498 aa18.58■□□□□ 0.57
TCF4-243ENST00000569357 NESP48681 1621 aa18.54■□□□□ 0.56
TCF4-243ENST00000569357 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.55
TCF4-243ENST00000569357 THOC2Q8NI27 1593 aaKnown RBP18.38■□□□□ 0.53
TCF4-243ENST00000569357 SMARCA2P51531 1590 aa18.35■□□□□ 0.53
TCF4-243ENST00000569357 HMGXB3Q12766 1538 aa18.34■□□□□ 0.53
TCF4-243ENST00000569357 BAZ1BQ9UIG0 1483 aaKnown RBP18.28■□□□□ 0.52
TCF4-243ENST00000569357 SMARCA4P51532 1647 aa18.26■□□□□ 0.51
TCF4-243ENST00000569357 LAMC3Q9Y6N6 1575 aa18.24■□□□□ 0.51
TCF4-243ENST00000569357 PDS5BQ9NTI5 1447 aa18.23■□□□□ 0.51
TCF4-243ENST00000569357 KIF21AQ7Z4S6 1674 aa18.2■□□□□ 0.5
TCF4-243ENST00000569357 OSCARQ8IYS5 282 aa18.1■□□□□ 0.49
TCF4-243ENST00000569357 BAZ1AQ9NRL2 1556 aaPredicted RBP18.09■□□□□ 0.49
TCF4-243ENST00000569357 MRC2Q9UBG0 1479 aa18.08■□□□□ 0.49
TCF4-243ENST00000569357 CADPSQ9ULU8 1353 aa18.04■□□□□ 0.48
TCF4-243ENST00000569357 PEG3Q9GZU2 1588 aa18.02■□□□□ 0.48
TCF4-243ENST00000569357 WDR62O43379 1518 aa18■□□□□ 0.47
TCF4-243ENST00000569357 MROH2BQ7Z745 1585 aa17.94■□□□□ 0.46
TCF4-243ENST00000569357 CEP164Q9UPV0 1460 aa17.9■□□□□ 0.46
TCF4-243ENST00000569357 FANCD2Q9BXW9 1451 aa17.83■□□□□ 0.45
TCF4-243ENST00000569357 RIMBP3CA6NJZ7 1639 aa17.83■□□□□ 0.44
TCF4-243ENST00000569357 RIMBP3BA6NNM3 1639 aa17.83■□□□□ 0.44
TCF4-243ENST00000569357 RIMBP3Q9UFD9 1639 aa17.83■□□□□ 0.44
TCF4-243ENST00000569357 TRHP20396 242 aaPredicted RBP17.82■□□□□ 0.44
TCF4-243ENST00000569357 CYB5RLQ6IPT4 315 aa17.77■□□□□ 0.44
TCF4-243ENST00000569357 ARHGEF11O15085 1522 aa17.73■□□□□ 0.43
TCF4-243ENST00000569357 URB2Q14146 1524 aaKnown RBP17.7■□□□□ 0.42
TCF4-243ENST00000569357 WIZO95785 1651 aa17.69■□□□□ 0.42
TCF4-243ENST00000569357 CFTRP13569 1480 aa17.66■□□□□ 0.42
TCF4-243ENST00000569357 ZNF608Q9ULD9 1512 aaPredicted RBP17.61■□□□□ 0.41
TCF4-243ENST00000569357 IFT140Q96RY7 1462 aa17.55■□□□□ 0.4
TCF4-243ENST00000569357 FBLN2P98095 1184 aa17.54■□□□□ 0.4
TCF4-243ENST00000569357 ARAP1Q96P48 1450 aa17.51■□□□□ 0.39
TCF4-243ENST00000569357 EIF4G3O43432 1585 aaKnown RBP17.43■□□□□ 0.38
TCF4-243ENST00000569357 AQRO60306 1485 aaKnown RBP eCLIP17.41■□□□□ 0.38
TCF4-243ENST00000569357 TOPBP1Q92547 1522 aa17.41■□□□□ 0.38
TCF4-243ENST00000569357 TOP2AP11388 1531 aaKnown RBP17.4■□□□□ 0.38
TCF4-243ENST00000569357 RSF1Q96T23 1441 aaPredicted RBP17.39■□□□□ 0.38
TCF4-243ENST00000569357 CHD1O14646 1710 aa17.39■□□□□ 0.37
TCF4-243ENST00000569357 MAPK8IP2Q13387 824 aaPredicted RBP17.38■□□□□ 0.37
TCF4-243ENST00000569357 PRDM2Q13029 1718 aa17.32■□□□□ 0.36
TCF4-243ENST00000569357 ABCC8Q09428 1581 aa17.31■□□□□ 0.36
TCF4-243ENST00000569357 CCDC88BA6NC98 1476 aa17.26■□□□□ 0.35
TCF4-243ENST00000569357 DNMBPQ6XZF7 1577 aa17.26■□□□□ 0.35
TCF4-243ENST00000569357 CHMP7Q8WUX9 453 aaPredicted RBP17.25■□□□□ 0.35
TCF4-243ENST00000569357 DMRT2Q9Y5R5 561 aa17.25■□□□□ 0.35
TCF4-243ENST00000569357 TARBP1Q13395 1621 aaKnown RBP17.24■□□□□ 0.35
TCF4-243ENST00000569357 TDRD9Q8NDG6 1382 aaKnown RBP17.24■□□□□ 0.35
TCF4-243ENST00000569357 RAD54L2Q9Y4B4 1467 aa17.2■□□□□ 0.34
TCF4-243ENST00000569357 POLA1P09884 1462 aaPredicted RBP17.19■□□□□ 0.34
TCF4-243ENST00000569357 SNAPC4Q5SXM2 1469 aa17.18■□□□□ 0.34
TCF4-243ENST00000569357 CLASP1Q7Z460 1538 aa17.17■□□□□ 0.34
TCF4-243ENST00000569357 SOGA1O94964 1423 aa17.16■□□□□ 0.34
TCF4-243ENST00000569357 SYNJ1O43426 1573 aa17.15■□□□□ 0.34
TCF4-243ENST00000569357 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
TCF4-243ENST00000569357 MAGI1Q96QZ7 1491 aaPredicted RBP17.06■□□□□ 0.32
TCF4-243ENST00000569357 SYNJ2O15056 1496 aa17.04■□□□□ 0.32
TCF4-243ENST00000569357 GRIN2BQ13224 1484 aa17.03■□□□□ 0.32
TCF4-243ENST00000569357 FGD5Q6ZNL6 1462 aa17.03■□□□□ 0.32
TCF4-243ENST00000569357 ILDR1Q86SU0 546 aaPredicted RBP16.99■□□□□ 0.31
TCF4-243ENST00000569357 WDR97A6NE52 1622 aa16.97■□□□□ 0.31
TCF4-243ENST00000569357 CACNB1Q02641 598 aaPredicted RBP16.96■□□□□ 0.31
TCF4-243ENST00000569357 ERCC6L2Q5T890 1561 aa16.92■□□□□ 0.3
TCF4-243ENST00000569357 SCAF1Q9H7N4 1312 aaKnown RBP16.92■□□□□ 0.3
TCF4-243ENST00000569357 CUX1P39880 1505 aa16.89■□□□□ 0.29
TCF4-243ENST00000569357 PBRM1Q86U86 1689 aa16.85■□□□□ 0.29
TCF4-243ENST00000569357 KDM4FA0A1W2PPD8 638 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms