RNA–Protein interactions for RNA: ENST00000569348.5

NAE1-220, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 4

Gene NAE1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-220ENST00000569348 NISCHQ9Y2I1 1504 aa49.08■■■■■ 5.45
NAE1-220ENST00000569348 ABCC9O60706 1549 aa43.9■■■■■ 4.62
NAE1-220ENST00000569348 CCDC180Q9P1Z9 1646 aa43.86■■■■■ 4.61
NAE1-220ENST00000569348 RB1CC1Q8TDY2 1594 aa41.71■■■■■ 4.27
NAE1-220ENST00000569348 DCAF8L2P0C7V8 631 aa41.54■■■■■ 4.24
NAE1-220ENST00000569348 NACADO15069 1562 aa41.45■■■■■ 4.23
NAE1-220ENST00000569348 DNAJC5BQ9UF47 199 aa41.08■■■■■ 4.17
NAE1-220ENST00000569348 PABPN1Q86U42 306 aaKnown RBP eCLIP40.96■■■■■ 4.15
NAE1-220ENST00000569348 MYO15BQ96JP2 1530 aa40.86■■■■■ 4.13
NAE1-220ENST00000569348 UNC13AQ9UPW8 1703 aa40.83■■■■■ 4.13
NAE1-220ENST00000569348 ZCCHC6Q5VYS8 1495 aaKnown RBP40.71■■■■■ 4.11
NAE1-220ENST00000569348 BICRAQ9NZM4 1560 aa40.57■■■■■ 4.09
NAE1-220ENST00000569348 DCAF1Q9Y4B6 1507 aa40.44■■■■■ 4.06
NAE1-220ENST00000569348 SCRIBQ14160 1630 aa40.16■■■■■ 4.02
NAE1-220ENST00000569348 SHROOM4Q9ULL8 1493 aa39.85■■■■□ 3.97
NAE1-220ENST00000569348 CC2D2AQ9P2K1 1620 aa39.59■■■■□ 3.93
NAE1-220ENST00000569348 EIF4G1Q04637 1599 aaKnown RBP39.54■■■■□ 3.92
NAE1-220ENST00000569348 CECR2Q9BXF3 1484 aa39.46■■■■□ 3.91
NAE1-220ENST00000569348 NCAPD3P42695 1498 aa38.29■■■■□ 3.72
NAE1-220ENST00000569348 ATAD2BQ9ULI0 1458 aa38.26■■■■□ 3.72
NAE1-220ENST00000569348 SMARCA4P51532 1647 aa38.25■■■■□ 3.71
NAE1-220ENST00000569348 SMARCA2P51531 1590 aa38.09■■■■□ 3.69
NAE1-220ENST00000569348 BAZ1AQ9NRL2 1556 aaPredicted RBP38.05■■■■□ 3.68
NAE1-220ENST00000569348 HMGXB3Q12766 1538 aa38■■■■□ 3.67
NAE1-220ENST00000569348 BAZ1BQ9UIG0 1483 aaKnown RBP37.9■■■■□ 3.66
NAE1-220ENST00000569348 MROH2BQ7Z745 1585 aa37.89■■■■□ 3.66
NAE1-220ENST00000569348 ERCC6Q03468 1493 aa37.84■■■■□ 3.65
NAE1-220ENST00000569348 PEG3Q9GZU2 1588 aa37.8■■■■□ 3.64
NAE1-220ENST00000569348 NESP48681 1621 aa37.79■■■■□ 3.64
NAE1-220ENST00000569348 CUX2O14529 1486 aa37.61■■■■□ 3.61
NAE1-220ENST00000569348 DNAJC5Q9H3Z4 198 aa37.47■■■■□ 3.59
NAE1-220ENST00000569348 WIZO95785 1651 aa37.45■■■■□ 3.59
NAE1-220ENST00000569348 LAMC3Q9Y6N6 1575 aa37.38■■■■□ 3.58
NAE1-220ENST00000569348 THOC2Q8NI27 1593 aaKnown RBP37.26■■■■□ 3.56
NAE1-220ENST00000569348 KIF21AQ7Z4S6 1674 aa37.23■■■■□ 3.55
NAE1-220ENST00000569348 PDS5BQ9NTI5 1447 aa37.19■■■■□ 3.54
NAE1-220ENST00000569348 CADPSQ9ULU8 1353 aa37.17■■■■□ 3.54
NAE1-220ENST00000569348 RSF1Q96T23 1441 aaPredicted RBP37.15■■■■□ 3.54
NAE1-220ENST00000569348 TOP2AP11388 1531 aaKnown RBP36.91■■■■□ 3.5
NAE1-220ENST00000569348 MRC2Q9UBG0 1479 aa36.88■■■■□ 3.5
NAE1-220ENST00000569348 FANCD2Q9BXW9 1451 aa36.78■■■■□ 3.48
NAE1-220ENST00000569348 CEP164Q9UPV0 1460 aa36.78■■■■□ 3.48
NAE1-220ENST00000569348 CFTRP13569 1480 aa36.77■■■■□ 3.48
NAE1-220ENST00000569348 WDR62O43379 1518 aa36.76■■■■□ 3.48
NAE1-220ENST00000569348 CCDC88BA6NC98 1476 aa36.56■■■■□ 3.44
NAE1-220ENST00000569348 URB2Q14146 1524 aaKnown RBP36.49■■■■□ 3.43
NAE1-220ENST00000569348 PRDM2Q13029 1718 aa36.36■■■■□ 3.41
NAE1-220ENST00000569348 TOPBP1Q92547 1522 aa36.1■■■■□ 3.37
NAE1-220ENST00000569348 ZNF608Q9ULD9 1512 aaPredicted RBP36.05■■■■□ 3.36
NAE1-220ENST00000569348 TRIM41Q8WV44 630 aa36.03■■■■□ 3.36
NAE1-220ENST00000569348 IFT140Q96RY7 1462 aa36.02■■■■□ 3.36
NAE1-220ENST00000569348 OSCARQ8IYS5 282 aa36■■■■□ 3.35
NAE1-220ENST00000569348 DNMBPQ6XZF7 1577 aa35.95■■■■□ 3.35
NAE1-220ENST00000569348 ABCC8Q09428 1581 aa35.92■■■■□ 3.34
NAE1-220ENST00000569348 EIF4G3O43432 1585 aaKnown RBP35.79■■■■□ 3.32
NAE1-220ENST00000569348 SUPT5HO00267 1087 aaKnown RBP35.78■■■■□ 3.32
NAE1-220ENST00000569348 POLA1P09884 1462 aaPredicted RBP35.75■■■■□ 3.31
NAE1-220ENST00000569348 TARBP1Q13395 1621 aaKnown RBP35.75■■■■□ 3.31
NAE1-220ENST00000569348 AQRO60306 1485 aaKnown RBP eCLIP35.74■■■■□ 3.314e-7■■■■□ 21.6
NAE1-220ENST00000569348 RAD54L2Q9Y4B4 1467 aa35.69■■■■□ 3.3
NAE1-220ENST00000569348 SOGA1O94964 1423 aa35.59■■■■□ 3.29
NAE1-220ENST00000569348 CUX1P39880 1505 aa35.57■■■■□ 3.29
NAE1-220ENST00000569348 FGD5Q6ZNL6 1462 aa35.57■■■■□ 3.28
NAE1-220ENST00000569348 TDRD9Q8NDG6 1382 aaKnown RBP35.57■■■■□ 3.28
NAE1-220ENST00000569348 RIMBP3CA6NJZ7 1639 aa35.53■■■■□ 3.28
NAE1-220ENST00000569348 RIMBP3BA6NNM3 1639 aa35.53■■■■□ 3.28
NAE1-220ENST00000569348 RIMBP3Q9UFD9 1639 aa35.53■■■■□ 3.28
NAE1-220ENST00000569348 FBLN2P98095 1184 aa35.51■■■■□ 3.28
NAE1-220ENST00000569348 CHD1O14646 1710 aa35.51■■■■□ 3.27
NAE1-220ENST00000569348 ARHGEF11O15085 1522 aa35.42■■■■□ 3.26
NAE1-220ENST00000569348 SNAPC4Q5SXM2 1469 aa35.35■■■■□ 3.25
NAE1-220ENST00000569348 WDR97A6NE52 1622 aa35.26■■■■□ 3.24
NAE1-220ENST00000569348 CYB5RLQ6IPT4 315 aa35.23■■■■□ 3.23
NAE1-220ENST00000569348 GRIN2BQ13224 1484 aa35.22■■■■□ 3.23
NAE1-220ENST00000569348 CHMP7Q8WUX9 453 aaPredicted RBP35.21■■■■□ 3.23
NAE1-220ENST00000569348 MAGI1Q96QZ7 1491 aaPredicted RBP35.17■■■■□ 3.22
NAE1-220ENST00000569348 GAPVD1Q14C86 1478 aa35.16■■■■□ 3.22
NAE1-220ENST00000569348 ARAP1Q96P48 1450 aa35.12■■■■□ 3.21
NAE1-220ENST00000569348 ABCA10Q8WWZ4 1543 aa35.11■■■■□ 3.21
NAE1-220ENST00000569348 PBRM1Q86U86 1689 aa35.11■■■■□ 3.21
NAE1-220ENST00000569348 SYNJ2O15056 1496 aa35.09■■■■□ 3.21
NAE1-220ENST00000569348 CLASP1Q7Z460 1538 aa35.07■■■■□ 3.21
NAE1-220ENST00000569348 ABCA5Q8WWZ7 1642 aa35.06■■■■□ 3.2
NAE1-220ENST00000569348 SYNJ1O43426 1573 aa35.04■■■■□ 3.2
NAE1-220ENST00000569348 WRNQ14191 1432 aaPredicted RBP eCLIP35.03■■■■□ 3.2
NAE1-220ENST00000569348 TOP2BQ02880 1626 aa34.99■■■■□ 3.19
NAE1-220ENST00000569348 BIVM-ERCC5R4GMW8 1640 aa34.99■■■■□ 3.19
NAE1-220ENST00000569348 ADAMTS12P58397 1594 aa34.8■■■■□ 3.16
NAE1-220ENST00000569348 GRIN2AQ12879 1464 aa34.79■■■■□ 3.16
NAE1-220ENST00000569348 TRHP20396 242 aaPredicted RBP34.79■■■■□ 3.16
NAE1-220ENST00000569348 FHAD1B1AJZ9 1412 aa34.69■■■■□ 3.14
NAE1-220ENST00000569348 CEP170Q5SW79 1584 aa34.69■■■■□ 3.14
NAE1-220ENST00000569348 ERICH3Q5RHP9 1530 aa34.65■■■■□ 3.14
NAE1-220ENST00000569348 NUP160Q12769 1436 aa34.65■■■■□ 3.14
NAE1-220ENST00000569348 ERCC6L2Q5T890 1561 aa34.65■■■■□ 3.14
NAE1-220ENST00000569348 SHROOM2Q13796 1616 aa34.45■■■■□ 3.11
NAE1-220ENST00000569348 PRG4Q92954 1404 aaPredicted RBP34.36■■■■□ 3.09
NAE1-220ENST00000569348 JPH4Q96JJ6 628 aa34.35■■■■□ 3.09
NAE1-220ENST00000569348 IGF1RP08069 1367 aa34.34■■■■□ 3.09
NAE1-220ENST00000569348 KIF27Q86VH2 1401 aa34.32■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms