RNA–Protein interactions for RNA: ENST00000569321.1

CSK-212, Transcript of C-terminal Src kinase, humanhuman

TSL 2

Gene CSK, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSK-212ENST00000569321 NISCHQ9Y2I1 1504 aa41.87■■■■■ 4.29
CSK-212ENST00000569321 CCDC180Q9P1Z9 1646 aa36.99■■■■□ 3.51
CSK-212ENST00000569321 ABCC9O60706 1549 aa36.86■■■■□ 3.49
CSK-212ENST00000569321 DNAJC5BQ9UF47 199 aa35.68■■■■□ 3.3
CSK-212ENST00000569321 ZCCHC6Q5VYS8 1495 aaKnown RBP34.99■■■■□ 3.19
CSK-212ENST00000569321 DCAF1Q9Y4B6 1507 aa34.79■■■■□ 3.16
CSK-212ENST00000569321 MYO15BQ96JP2 1530 aa34.76■■■■□ 3.16
CSK-212ENST00000569321 DCAF8L2P0C7V8 631 aa34.72■■■■□ 3.15
CSK-212ENST00000569321 NACADO15069 1562 aa34.7■■■■□ 3.15
CSK-212ENST00000569321 RB1CC1Q8TDY2 1594 aa34.61■■■■□ 3.13
CSK-212ENST00000569321 PABPN1Q86U42 306 aaKnown RBP eCLIP34.16■■■■□ 3.06
CSK-212ENST00000569321 UNC13AQ9UPW8 1703 aa33.78■■■■□ 3
CSK-212ENST00000569321 SCRIBQ14160 1630 aa33.67■■■□□ 2.98
CSK-212ENST00000569321 BICRAQ9NZM4 1560 aa33.65■■■□□ 2.98
CSK-212ENST00000569321 DNAJC5Q9H3Z4 198 aa33.63■■■□□ 2.97
CSK-212ENST00000569321 CECR2Q9BXF3 1484 aa33.37■■■□□ 2.93
CSK-212ENST00000569321 SHROOM4Q9ULL8 1493 aa33.35■■■□□ 2.93
CSK-212ENST00000569321 CC2D2AQ9P2K1 1620 aa33.23■■■□□ 2.91
CSK-212ENST00000569321 EIF4G1Q04637 1599 aaKnown RBP32.92■■■□□ 2.86
CSK-212ENST00000569321 BAZ1AQ9NRL2 1556 aaPredicted RBP32.47■■■□□ 2.79
CSK-212ENST00000569321 SMARCA4P51532 1647 aa32.33■■■□□ 2.77
CSK-212ENST00000569321 CUX2O14529 1486 aa32.32■■■□□ 2.76
CSK-212ENST00000569321 MROH2BQ7Z745 1585 aa32.19■■■□□ 2.74
CSK-212ENST00000569321 SMARCA2P51531 1590 aa32.11■■■□□ 2.73
CSK-212ENST00000569321 RSF1Q96T23 1441 aaPredicted RBP32.1■■■□□ 2.73
CSK-212ENST00000569321 PEG3Q9GZU2 1588 aa32.08■■■□□ 2.73
CSK-212ENST00000569321 ATAD2BQ9ULI0 1458 aa32.05■■■□□ 2.72
CSK-212ENST00000569321 NCAPD3P42695 1498 aa32.02■■■□□ 2.72
CSK-212ENST00000569321 ERCC6Q03468 1493 aa31.91■■■□□ 2.7
CSK-212ENST00000569321 HMGXB3Q12766 1538 aa31.89■■■□□ 2.7
CSK-212ENST00000569321 BAZ1BQ9UIG0 1483 aaKnown RBP31.84■■■□□ 2.69
CSK-212ENST00000569321 WIZO95785 1651 aa31.83■■■□□ 2.69
CSK-212ENST00000569321 SUPT5HO00267 1087 aaKnown RBP31.67■■■□□ 2.66
CSK-212ENST00000569321 TOP2AP11388 1531 aaKnown RBP31.65■■■□□ 2.66
CSK-212ENST00000569321 TRIM41Q8WV44 630 aa31.54■■■□□ 2.64
CSK-212ENST00000569321 NESP48681 1621 aa31.35■■■□□ 2.61
CSK-212ENST00000569321 CCDC88BA6NC98 1476 aa31.25■■■□□ 2.59
CSK-212ENST00000569321 THOC2Q8NI27 1593 aaKnown RBP31.25■■■□□ 2.59
CSK-212ENST00000569321 CADPSQ9ULU8 1353 aa31.11■■■□□ 2.57
CSK-212ENST00000569321 LAMC3Q9Y6N6 1575 aa31.06■■■□□ 2.56
CSK-212ENST00000569321 CFTRP13569 1480 aa31.02■■■□□ 2.56
CSK-212ENST00000569321 PDS5BQ9NTI5 1447 aa30.9■■■□□ 2.54
CSK-212ENST00000569321 PRDM2Q13029 1718 aa30.81■■■□□ 2.52
CSK-212ENST00000569321 KIF21AQ7Z4S6 1674 aa30.81■■■□□ 2.52
CSK-212ENST00000569321 FANCD2Q9BXW9 1451 aa30.7■■■□□ 2.5
CSK-212ENST00000569321 OSCARQ8IYS5 282 aa30.66■■■□□ 2.5
CSK-212ENST00000569321 MRC2Q9UBG0 1479 aa30.64■■■□□ 2.5
CSK-212ENST00000569321 CEP164Q9UPV0 1460 aa30.63■■■□□ 2.49
CSK-212ENST00000569321 WDR62O43379 1518 aa30.62■■■□□ 2.49
CSK-212ENST00000569321 ABCC8Q09428 1581 aa30.45■■■□□ 2.47
CSK-212ENST00000569321 WRNQ14191 1432 aaPredicted RBP eCLIP30.3■■■□□ 2.44
CSK-212ENST00000569321 URB2Q14146 1524 aaKnown RBP30.29■■■□□ 2.44
CSK-212ENST00000569321 DNMBPQ6XZF7 1577 aa30.28■■■□□ 2.44
CSK-212ENST00000569321 RIMBP3CA6NJZ7 1639 aa30.28■■■□□ 2.44
CSK-212ENST00000569321 RIMBP3BA6NNM3 1639 aa30.28■■■□□ 2.44
CSK-212ENST00000569321 RIMBP3Q9UFD9 1639 aa30.28■■■□□ 2.44
CSK-212ENST00000569321 TOPBP1Q92547 1522 aa30.25■■■□□ 2.43
CSK-212ENST00000569321 CUX1P39880 1505 aa30.18■■■□□ 2.42
CSK-212ENST00000569321 TOP2BQ02880 1626 aa30.13■■■□□ 2.41
CSK-212ENST00000569321 ARHGEF11O15085 1522 aa30.12■■■□□ 2.41
CSK-212ENST00000569321 BIVM-ERCC5R4GMW8 1640 aa30.1■■■□□ 2.41
CSK-212ENST00000569321 SYNJ1O43426 1573 aa30.06■■■□□ 2.4
CSK-212ENST00000569321 FGD5Q6ZNL6 1462 aa30.03■■■□□ 2.4
CSK-212ENST00000569321 POLA1P09884 1462 aaPredicted RBP30.02■■■□□ 2.4
CSK-212ENST00000569321 IFT140Q96RY7 1462 aa30■■■□□ 2.39
CSK-212ENST00000569321 CYB5RLQ6IPT4 315 aa29.97■■■□□ 2.39
CSK-212ENST00000569321 SOGA1O94964 1423 aa29.96■■■□□ 2.39
CSK-212ENST00000569321 TRHP20396 242 aaPredicted RBP29.96■■■□□ 2.39
CSK-212ENST00000569321 CHIC1Q5VXU3 224 aa29.93■■■□□ 2.38
CSK-212ENST00000569321 AEBP2Q6ZN18 517 aaPredicted RBP29.93■■■□□ 2.38
CSK-212ENST00000569321 TARBP1Q13395 1621 aaKnown RBP29.84■■■□□ 2.37
CSK-212ENST00000569321 RAD54L2Q9Y4B4 1467 aa29.83■■■□□ 2.37
CSK-212ENST00000569321 ABCA10Q8WWZ4 1543 aa29.82■■■□□ 2.36
CSK-212ENST00000569321 WDR97A6NE52 1622 aa29.81■■■□□ 2.36
CSK-212ENST00000569321 ZNF608Q9ULD9 1512 aaPredicted RBP29.79■■■□□ 2.36
CSK-212ENST00000569321 ARAP1Q96P48 1450 aa29.75■■■□□ 2.35
CSK-212ENST00000569321 KIF27Q86VH2 1401 aa29.67■■■□□ 2.34
CSK-212ENST00000569321 TDRD9Q8NDG6 1382 aaKnown RBP29.66■■■□□ 2.34
CSK-212ENST00000569321 GAPVD1Q14C86 1478 aa29.62■■■□□ 2.33
CSK-212ENST00000569321 EIF4G3O43432 1585 aaKnown RBP29.61■■■□□ 2.33
CSK-212ENST00000569321 AQRO60306 1485 aaKnown RBP eCLIP29.61■■■□□ 2.33
CSK-212ENST00000569321 ABCA5Q8WWZ7 1642 aa29.58■■■□□ 2.33
CSK-212ENST00000569321 GRIN2BQ13224 1484 aa29.57■■■□□ 2.32
CSK-212ENST00000569321 EEA1Q15075 1411 aa29.56■■■□□ 2.32
CSK-212ENST00000569321 ERICH3Q5RHP9 1530 aa29.5■■■□□ 2.31
CSK-212ENST00000569321 MAGI1Q96QZ7 1491 aaPredicted RBP29.45■■■□□ 2.31
CSK-212ENST00000569321 PBRM1Q86U86 1689 aa29.44■■■□□ 2.3
CSK-212ENST00000569321 CHD1O14646 1710 aa29.43■■■□□ 2.3
CSK-212ENST00000569321 IGF1RP08069 1367 aa29.42■■■□□ 2.3
CSK-212ENST00000569321 FBLN2P98095 1184 aa29.37■■■□□ 2.29
CSK-212ENST00000569321 SNAPC4Q5SXM2 1469 aa29.36■■■□□ 2.29
CSK-212ENST00000569321 RUSC2Q8N2Y8 1516 aa29.35■■■□□ 2.29
CSK-212ENST00000569321 CSRNP3Q8WYN3 585 aa29.35■■■□□ 2.29
CSK-212ENST00000569321 FHAD1B1AJZ9 1412 aa29.34■■■□□ 2.29
CSK-212ENST00000569321 CUL7Q14999 1698 aa29.31■■■□□ 2.28
CSK-212ENST00000569321 SYNJ2O15056 1496 aa29.3■■■□□ 2.28
CSK-212ENST00000569321 CARMIL1Q5VZK9 1371 aa29.28■■■□□ 2.28
CSK-212ENST00000569321 CHMP7Q8WUX9 453 aaPredicted RBP29.27■■■□□ 2.28
CSK-212ENST00000569321 ADAMTS12P58397 1594 aa29.26■■■□□ 2.28
CSK-212ENST00000569321 FAM9AQ8IZU1 332 aaPredicted RBP29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms