RNA–Protein interactions for RNA: ENST00000569306.1

C13orf42-203, Transcript of chromosome 13 open reading frame 42, humanhuman

TSL 3

Gene C13orf42, Length 826 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C13orf42-203ENST00000569306 NISCHQ9Y2I1 1504 aa28.13■■■□□ 2.09
C13orf42-203ENST00000569306 ABCC9O60706 1549 aa25.86■■□□□ 1.73
C13orf42-203ENST00000569306 CCDC180Q9P1Z9 1646 aa25.24■■□□□ 1.63
C13orf42-203ENST00000569306 DNAJC5BQ9UF47 199 aa24.69■■□□□ 1.54
C13orf42-203ENST00000569306 RB1CC1Q8TDY2 1594 aa24.36■■□□□ 1.49
C13orf42-203ENST00000569306 DCAF8L2P0C7V8 631 aa24.2■■□□□ 1.46
C13orf42-203ENST00000569306 PABPN1Q86U42 306 aaKnown RBP eCLIP24.14■■□□□ 1.45
C13orf42-203ENST00000569306 NACADO15069 1562 aa24.11■■□□□ 1.45
C13orf42-203ENST00000569306 MYO15BQ96JP2 1530 aa23.64■■□□□ 1.37
C13orf42-203ENST00000569306 BICRAQ9NZM4 1560 aa23.59■■□□□ 1.37
C13orf42-203ENST00000569306 UNC13AQ9UPW8 1703 aa23.53■■□□□ 1.36
C13orf42-203ENST00000569306 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
C13orf42-203ENST00000569306 SHROOM4Q9ULL8 1493 aa23.31■■□□□ 1.32
C13orf42-203ENST00000569306 CC2D2AQ9P2K1 1620 aa23.23■■□□□ 1.31
C13orf42-203ENST00000569306 ZCCHC6Q5VYS8 1495 aaKnown RBP23.19■■□□□ 1.3
C13orf42-203ENST00000569306 DCAF1Q9Y4B6 1507 aa23.18■■□□□ 1.3
C13orf42-203ENST00000569306 EIF4G1Q04637 1599 aaKnown RBP23.1■■□□□ 1.29
C13orf42-203ENST00000569306 SCRIBQ14160 1630 aa23.08■■□□□ 1.28
C13orf42-203ENST00000569306 DNAJC5Q9H3Z4 198 aa23.02■■□□□ 1.28
C13orf42-203ENST00000569306 CUX2O14529 1486 aa22.43■■□□□ 1.18
C13orf42-203ENST00000569306 ERCC6Q03468 1493 aa22.41■■□□□ 1.18
C13orf42-203ENST00000569306 NCAPD3P42695 1498 aa22.33■■□□□ 1.16
C13orf42-203ENST00000569306 ATAD2BQ9ULI0 1458 aa22.19■■□□□ 1.14
C13orf42-203ENST00000569306 SMARCA2P51531 1590 aa22.07■■□□□ 1.12
C13orf42-203ENST00000569306 NESP48681 1621 aa22.06■■□□□ 1.12
C13orf42-203ENST00000569306 HMGXB3Q12766 1538 aa22.02■■□□□ 1.12
C13orf42-203ENST00000569306 BAZ1BQ9UIG0 1483 aaKnown RBP21.96■■□□□ 1.11
C13orf42-203ENST00000569306 SMARCA4P51532 1647 aa21.95■■□□□ 1.1
C13orf42-203ENST00000569306 TRIM41Q8WV44 630 aa21.89■■□□□ 1.09
C13orf42-203ENST00000569306 BAZ1AQ9NRL2 1556 aaPredicted RBP21.85■■□□□ 1.09
C13orf42-203ENST00000569306 PDS5BQ9NTI5 1447 aa21.84■■□□□ 1.09
C13orf42-203ENST00000569306 LAMC3Q9Y6N6 1575 aa21.79■■□□□ 1.08
C13orf42-203ENST00000569306 THOC2Q8NI27 1593 aaKnown RBP21.78■■□□□ 1.08
C13orf42-203ENST00000569306 PEG3Q9GZU2 1588 aa21.74■■□□□ 1.07
C13orf42-203ENST00000569306 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
C13orf42-203ENST00000569306 MROH2BQ7Z745 1585 aa21.65■■□□□ 1.06
C13orf42-203ENST00000569306 MRC2Q9UBG0 1479 aa21.59■■□□□ 1.05
C13orf42-203ENST00000569306 KIF21AQ7Z4S6 1674 aa21.58■■□□□ 1.05
C13orf42-203ENST00000569306 OSCARQ8IYS5 282 aa21.52■■□□□ 1.04
C13orf42-203ENST00000569306 WDR62O43379 1518 aa21.48■■□□□ 1.03
C13orf42-203ENST00000569306 CEP164Q9UPV0 1460 aa21.43■■□□□ 1.02
C13orf42-203ENST00000569306 FANCD2Q9BXW9 1451 aa21.39■■□□□ 1.01
C13orf42-203ENST00000569306 WIZO95785 1651 aa21.3■■□□□ 1
C13orf42-203ENST00000569306 CFTRP13569 1480 aa21.29■■□□□ 1
C13orf42-203ENST00000569306 URB2Q14146 1524 aaKnown RBP21.19■□□□□ 0.98
C13orf42-203ENST00000569306 RSF1Q96T23 1441 aaPredicted RBP21.13■□□□□ 0.97
C13orf42-203ENST00000569306 TOP2AP11388 1531 aaKnown RBP21.06■□□□□ 0.96
C13orf42-203ENST00000569306 CYB5RLQ6IPT4 315 aa21.05■□□□□ 0.96
C13orf42-203ENST00000569306 IFT140Q96RY7 1462 aa21.04■□□□□ 0.96
C13orf42-203ENST00000569306 RIMBP3CA6NJZ7 1639 aa21.01■□□□□ 0.95
C13orf42-203ENST00000569306 RIMBP3BA6NNM3 1639 aa21.01■□□□□ 0.95
C13orf42-203ENST00000569306 RIMBP3Q9UFD9 1639 aa21.01■□□□□ 0.95
C13orf42-203ENST00000569306 ZNF608Q9ULD9 1512 aaPredicted RBP21.01■□□□□ 0.95
C13orf42-203ENST00000569306 TRHP20396 242 aaPredicted RBP20.98■□□□□ 0.95
C13orf42-203ENST00000569306 ARHGEF11O15085 1522 aa20.98■□□□□ 0.95
C13orf42-203ENST00000569306 FBLN2P98095 1184 aa20.92■□□□□ 0.94
C13orf42-203ENST00000569306 CCDC88BA6NC98 1476 aa20.9■□□□□ 0.94
C13orf42-203ENST00000569306 TOPBP1Q92547 1522 aa20.89■□□□□ 0.94
C13orf42-203ENST00000569306 ABCC8Q09428 1581 aa20.88■□□□□ 0.93
C13orf42-203ENST00000569306 AQRO60306 1485 aaKnown RBP eCLIP20.83■□□□□ 0.93
C13orf42-203ENST00000569306 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
C13orf42-203ENST00000569306 ARAP1Q96P48 1450 aa20.75■□□□□ 0.91
C13orf42-203ENST00000569306 DNMBPQ6XZF7 1577 aa20.74■□□□□ 0.91
C13orf42-203ENST00000569306 PRDM2Q13029 1718 aa20.71■□□□□ 0.91
C13orf42-203ENST00000569306 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
C13orf42-203ENST00000569306 CHMP7Q8WUX9 453 aaPredicted RBP20.69■□□□□ 0.9
C13orf42-203ENST00000569306 TDRD9Q8NDG6 1382 aaKnown RBP20.69■□□□□ 0.9
C13orf42-203ENST00000569306 POLA1P09884 1462 aaPredicted RBP20.67■□□□□ 0.9
C13orf42-203ENST00000569306 SOGA1O94964 1423 aa20.66■□□□□ 0.9
C13orf42-203ENST00000569306 TARBP1Q13395 1621 aaKnown RBP20.64■□□□□ 0.89
C13orf42-203ENST00000569306 RAD54L2Q9Y4B4 1467 aa20.63■□□□□ 0.89
C13orf42-203ENST00000569306 CHD1O14646 1710 aa20.6■□□□□ 0.89
C13orf42-203ENST00000569306 SNAPC4Q5SXM2 1469 aa20.56■□□□□ 0.88
C13orf42-203ENST00000569306 MAGI1Q96QZ7 1491 aaPredicted RBP20.49■□□□□ 0.87
C13orf42-203ENST00000569306 GRIN2BQ13224 1484 aa20.48■□□□□ 0.87
C13orf42-203ENST00000569306 FGD5Q6ZNL6 1462 aa20.48■□□□□ 0.87
C13orf42-203ENST00000569306 SYNJ1O43426 1573 aa20.47■□□□□ 0.87
C13orf42-203ENST00000569306 CLASP1Q7Z460 1538 aa20.47■□□□□ 0.87
C13orf42-203ENST00000569306 SYNJ2O15056 1496 aa20.43■□□□□ 0.86
C13orf42-203ENST00000569306 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
C13orf42-203ENST00000569306 GAPVD1Q14C86 1478 aa20.4■□□□□ 0.86
C13orf42-203ENST00000569306 CUX1P39880 1505 aa20.36■□□□□ 0.85
C13orf42-203ENST00000569306 ABCA10Q8WWZ4 1543 aa20.22■□□□□ 0.83
C13orf42-203ENST00000569306 GRIN2AQ12879 1464 aa20.18■□□□□ 0.82
C13orf42-203ENST00000569306 WRNQ14191 1432 aaPredicted RBP eCLIP20.15■□□□□ 0.82
C13orf42-203ENST00000569306 NUP160Q12769 1436 aa20.13■□□□□ 0.81
C13orf42-203ENST00000569306 PBRM1Q86U86 1689 aa20.13■□□□□ 0.81
C13orf42-203ENST00000569306 ERCC6L2Q5T890 1561 aa20.12■□□□□ 0.81
C13orf42-203ENST00000569306 ABCA5Q8WWZ7 1642 aa20.11■□□□□ 0.81
C13orf42-203ENST00000569306 FHAD1B1AJZ9 1412 aa20.1■□□□□ 0.81
C13orf42-203ENST00000569306 CEP170Q5SW79 1584 aa20.09■□□□□ 0.81
C13orf42-203ENST00000569306 NPM1P06748 294 aaKnown RBP eCLIP20.08■□□□□ 0.81
C13orf42-203ENST00000569306 JPH4Q96JJ6 628 aa20.08■□□□□ 0.81
C13orf42-203ENST00000569306 SUPT5HO00267 1087 aaKnown RBP20.07■□□□□ 0.8
C13orf42-203ENST00000569306 FAM69CQ0P6D2 419 aa20.06■□□□□ 0.8
C13orf42-203ENST00000569306 PRG4Q92954 1404 aaPredicted RBP20.04■□□□□ 0.8
C13orf42-203ENST00000569306 ADAMTS12P58397 1594 aa20.01■□□□□ 0.79
C13orf42-203ENST00000569306 ERICH3Q5RHP9 1530 aa19.95■□□□□ 0.78
C13orf42-203ENST00000569306 SHROOM2Q13796 1616 aa19.94■□□□□ 0.78
C13orf42-203ENST00000569306 ABCC10Q5T3U5 1492 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms