RNA–Protein interactions for RNA: ENST00000569288.1

LINC00555-201, long intergenic non-protein coding RNA 555, humanhuman

BASIC

Gene LINC00555, Length 442 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00555-201ENST00000569288 NISCHQ9Y2I1 1504 aa21.88■■□□□ 1.09
LINC00555-201ENST00000569288 CCDC180Q9P1Z9 1646 aa19.49■□□□□ 0.71
LINC00555-201ENST00000569288 ABCC9O60706 1549 aa18.7■□□□□ 0.58
LINC00555-201ENST00000569288 ZCCHC6Q5VYS8 1495 aaKnown RBP18.26■□□□□ 0.51
LINC00555-201ENST00000569288 MYO15BQ96JP2 1530 aa18.25■□□□□ 0.51
LINC00555-201ENST00000569288 NACADO15069 1562 aa18.24■□□□□ 0.51
LINC00555-201ENST00000569288 DCAF1Q9Y4B6 1507 aa18.21■□□□□ 0.51
LINC00555-201ENST00000569288 RB1CC1Q8TDY2 1594 aa18.2■□□□□ 0.5
LINC00555-201ENST00000569288 DCAF8L2P0C7V8 631 aa18■□□□□ 0.47
LINC00555-201ENST00000569288 UNC13AQ9UPW8 1703 aa17.84■□□□□ 0.45
LINC00555-201ENST00000569288 BICRAQ9NZM4 1560 aa17.63■□□□□ 0.41
LINC00555-201ENST00000569288 SCRIBQ14160 1630 aa17.62■□□□□ 0.41
LINC00555-201ENST00000569288 SHROOM4Q9ULL8 1493 aa17.56■□□□□ 0.4
LINC00555-201ENST00000569288 PABPN1Q86U42 306 aaKnown RBP eCLIP17.44■□□□□ 0.38
LINC00555-201ENST00000569288 EIF4G1Q04637 1599 aaKnown RBP17.14■□□□□ 0.33
LINC00555-201ENST00000569288 CC2D2AQ9P2K1 1620 aa17.02■□□□□ 0.31
LINC00555-201ENST00000569288 DNAJC5BQ9UF47 199 aa17.01■□□□□ 0.31
LINC00555-201ENST00000569288 BAZ1AQ9NRL2 1556 aaPredicted RBP16.97■□□□□ 0.31
LINC00555-201ENST00000569288 CECR2Q9BXF3 1484 aa16.96■□□□□ 0.31
LINC00555-201ENST00000569288 SMARCA4P51532 1647 aa16.96■□□□□ 0.3
LINC00555-201ENST00000569288 PEG3Q9GZU2 1588 aa16.86■□□□□ 0.29
LINC00555-201ENST00000569288 SMARCA2P51531 1590 aa16.82■□□□□ 0.28
LINC00555-201ENST00000569288 MROH2BQ7Z745 1585 aa16.81■□□□□ 0.28
LINC00555-201ENST00000569288 NCAPD3P42695 1498 aa16.8■□□□□ 0.28
LINC00555-201ENST00000569288 ATAD2BQ9ULI0 1458 aa16.8■□□□□ 0.28
LINC00555-201ENST00000569288 HMGXB3Q12766 1538 aa16.75■□□□□ 0.27
LINC00555-201ENST00000569288 RSF1Q96T23 1441 aaPredicted RBP16.72■□□□□ 0.27
LINC00555-201ENST00000569288 SUPT5HO00267 1087 aaKnown RBP16.68■□□□□ 0.26
LINC00555-201ENST00000569288 WIZO95785 1651 aa16.67■□□□□ 0.26
LINC00555-201ENST00000569288 BAZ1BQ9UIG0 1483 aaKnown RBP16.64■□□□□ 0.25
LINC00555-201ENST00000569288 TOP2AP11388 1531 aaKnown RBP16.52■□□□□ 0.24
LINC00555-201ENST00000569288 LAMC3Q9Y6N6 1575 aa16.36■□□□□ 0.21
LINC00555-201ENST00000569288 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
LINC00555-201ENST00000569288 CADPSQ9ULU8 1353 aa16.27■□□□□ 0.2
LINC00555-201ENST00000569288 PRDM2Q13029 1718 aa16.25■□□□□ 0.19
LINC00555-201ENST00000569288 CFTRP13569 1480 aa16.24■□□□□ 0.19
LINC00555-201ENST00000569288 NESP48681 1621 aa16.24■□□□□ 0.19
LINC00555-201ENST00000569288 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
LINC00555-201ENST00000569288 KIF21AQ7Z4S6 1674 aa16.15■□□□□ 0.18
LINC00555-201ENST00000569288 ERCC6Q03468 1493 aa16.12■□□□□ 0.17
LINC00555-201ENST00000569288 CHIC1Q5VXU3 224 aa16.09■□□□□ 0.17
LINC00555-201ENST00000569288 FANCD2Q9BXW9 1451 aa16.07■□□□□ 0.16
LINC00555-201ENST00000569288 THOC2Q8NI27 1593 aaKnown RBP16.06■□□□□ 0.16
LINC00555-201ENST00000569288 CEP164Q9UPV0 1460 aa16.04■□□□□ 0.16
LINC00555-201ENST00000569288 CUX2O14529 1486 aa16■□□□□ 0.15
LINC00555-201ENST00000569288 MRC2Q9UBG0 1479 aa15.99■□□□□ 0.15
LINC00555-201ENST00000569288 WDR62O43379 1518 aa15.98■□□□□ 0.15
LINC00555-201ENST00000569288 ABCC8Q09428 1581 aa15.93■□□□□ 0.14
LINC00555-201ENST00000569288 URB2Q14146 1524 aaKnown RBP15.9■□□□□ 0.14
LINC00555-201ENST00000569288 DNMBPQ6XZF7 1577 aa15.87■□□□□ 0.13
LINC00555-201ENST00000569288 TRIM41Q8WV44 630 aa15.86■□□□□ 0.13
LINC00555-201ENST00000569288 TOPBP1Q92547 1522 aa15.84■□□□□ 0.13
LINC00555-201ENST00000569288 CUX1P39880 1505 aa15.77■□□□□ 0.11
LINC00555-201ENST00000569288 BIVM-ERCC5R4GMW8 1640 aa15.76■□□□□ 0.11
LINC00555-201ENST00000569288 WRNQ14191 1432 aaPredicted RBP eCLIP15.75■□□□□ 0.11
LINC00555-201ENST00000569288 TOP2BQ02880 1626 aa15.74■□□□□ 0.11
LINC00555-201ENST00000569288 IFT140Q96RY7 1462 aa15.72■□□□□ 0.11
LINC00555-201ENST00000569288 POLA1P09884 1462 aaPredicted RBP15.71■□□□□ 0.11
LINC00555-201ENST00000569288 TARBP1Q13395 1621 aaKnown RBP15.71■□□□□ 0.11
LINC00555-201ENST00000569288 FGD5Q6ZNL6 1462 aa15.69■□□□□ 0.1
LINC00555-201ENST00000569288 SYNJ1O43426 1573 aa15.69■□□□□ 0.1
LINC00555-201ENST00000569288 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
LINC00555-201ENST00000569288 EEA1Q15075 1411 aa15.67■□□□□ 0.1
LINC00555-201ENST00000569288 SOGA1O94964 1423 aa15.64■□□□□ 0.09
LINC00555-201ENST00000569288 RAD54L2Q9Y4B4 1467 aa15.59■□□□□ 0.09
LINC00555-201ENST00000569288 ABCA10Q8WWZ4 1543 aa15.59■□□□□ 0.09
LINC00555-201ENST00000569288 EIF4G3O43432 1585 aaKnown RBP15.58■□□□□ 0.09
LINC00555-201ENST00000569288 ZNF608Q9ULD9 1512 aaPredicted RBP15.58■□□□□ 0.08
LINC00555-201ENST00000569288 ABCA5Q8WWZ7 1642 aa15.54■□□□□ 0.08
LINC00555-201ENST00000569288 AQRO60306 1485 aaKnown RBP eCLIP15.5■□□□□ 0.07
LINC00555-201ENST00000569288 PBRM1Q86U86 1689 aa15.5■□□□□ 0.07
LINC00555-201ENST00000569288 CSRNP3Q8WYN3 585 aa15.48■□□□□ 0.07
LINC00555-201ENST00000569288 TDRD9Q8NDG6 1382 aaKnown RBP15.48■□□□□ 0.07
LINC00555-201ENST00000569288 GAPVD1Q14C86 1478 aa15.47■□□□□ 0.07
LINC00555-201ENST00000569288 GRIN2BQ13224 1484 aa15.46■□□□□ 0.07
LINC00555-201ENST00000569288 MAGI1Q96QZ7 1491 aaPredicted RBP15.44■□□□□ 0.06
LINC00555-201ENST00000569288 ERICH3Q5RHP9 1530 aa15.43■□□□□ 0.06
LINC00555-201ENST00000569288 KIF27Q86VH2 1401 aa15.42■□□□□ 0.06
LINC00555-201ENST00000569288 CHD1O14646 1710 aa15.39■□□□□ 0.05
LINC00555-201ENST00000569288 SNAPC4Q5SXM2 1469 aa15.38■□□□□ 0.05
LINC00555-201ENST00000569288 SYNJ2O15056 1496 aa15.35■□□□□ 0.05
LINC00555-201ENST00000569288 ADAMTS12P58397 1594 aa15.35■□□□□ 0.05
LINC00555-201ENST00000569288 CUL7Q14999 1698 aa15.35■□□□□ 0.05
LINC00555-201ENST00000569288 LOC105371045A0A1W2PR82 267 aa15.32■□□□□ 0.04
LINC00555-201ENST00000569288 FAM9AQ8IZU1 332 aaPredicted RBP15.31■□□□□ 0.04
LINC00555-201ENST00000569288 FHAD1B1AJZ9 1412 aa15.31■□□□□ 0.04
LINC00555-201ENST00000569288 IGF1RP08069 1367 aa15.3■□□□□ 0.04
LINC00555-201ENST00000569288 OSCARQ8IYS5 282 aa15.3■□□□□ 0.04
LINC00555-201ENST00000569288 TNIKQ9UKE5 1360 aa15.3■□□□□ 0.04
LINC00555-201ENST00000569288 RUSC2Q8N2Y8 1516 aa15.29■□□□□ 0.04
LINC00555-201ENST00000569288 PRXQ9BXM0 1461 aa15.29■□□□□ 0.04
LINC00555-201ENST00000569288 KIF21BO75037 1637 aa15.28■□□□□ 0.04
LINC00555-201ENST00000569288 GOLGA3Q08378 1498 aa15.27■□□□□ 0.04
LINC00555-201ENST00000569288 DNAJC5Q9H3Z4 198 aa15.27■□□□□ 0.04
LINC00555-201ENST00000569288 GRIN2AQ12879 1464 aa15.27■□□□□ 0.03
LINC00555-201ENST00000569288 CHMP7Q8WUX9 453 aaPredicted RBP15.26■□□□□ 0.03
LINC00555-201ENST00000569288 CLASP1Q7Z460 1538 aa15.22■□□□□ 0.03
LINC00555-201ENST00000569288 NUP160Q12769 1436 aa15.21■□□□□ 0.03
LINC00555-201ENST00000569288 FBLN2P98095 1184 aa15.2■□□□□ 0.02
LINC00555-201ENST00000569288 CARMIL1Q5VZK9 1371 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms