RNA–Protein interactions for RNA: ENST00000569261.2

TUBAP4-201, Transcript of tubulin alpha pseudogene 4, humanhuman

BASIC

Gene TUBAP4, Length 416 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAP4-201ENST00000569261 NISCHQ9Y2I1 1504 aa20.54■□□□□ 0.88
TUBAP4-201ENST00000569261 ABCC9O60706 1549 aa18.69■□□□□ 0.58
TUBAP4-201ENST00000569261 CCDC180Q9P1Z9 1646 aa18.58■□□□□ 0.56
TUBAP4-201ENST00000569261 RB1CC1Q8TDY2 1594 aa17.76■□□□□ 0.43
TUBAP4-201ENST00000569261 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
TUBAP4-201ENST00000569261 NACADO15069 1562 aa17.59■□□□□ 0.41
TUBAP4-201ENST00000569261 UNC13AQ9UPW8 1703 aa17.33■□□□□ 0.37
TUBAP4-201ENST00000569261 PABPN1Q86U42 306 aaKnown RBP eCLIP17.32■□□□□ 0.36
TUBAP4-201ENST00000569261 DCAF8L2P0C7V8 631 aa17.31■□□□□ 0.36
TUBAP4-201ENST00000569261 MYO15BQ96JP2 1530 aa17.3■□□□□ 0.36
TUBAP4-201ENST00000569261 BICRAQ9NZM4 1560 aa17.23■□□□□ 0.35
TUBAP4-201ENST00000569261 SHROOM4Q9ULL8 1493 aa17.05■□□□□ 0.32
TUBAP4-201ENST00000569261 ZCCHC6Q5VYS8 1495 aaKnown RBP17■□□□□ 0.31
TUBAP4-201ENST00000569261 DCAF1Q9Y4B6 1507 aa16.99■□□□□ 0.31
TUBAP4-201ENST00000569261 CC2D2AQ9P2K1 1620 aa16.91■□□□□ 0.3
TUBAP4-201ENST00000569261 CECR2Q9BXF3 1484 aa16.89■□□□□ 0.29
TUBAP4-201ENST00000569261 SCRIBQ14160 1630 aa16.87■□□□□ 0.29
TUBAP4-201ENST00000569261 EIF4G1Q04637 1599 aaKnown RBP16.83■□□□□ 0.28
TUBAP4-201ENST00000569261 DNAJC5Q9H3Z4 198 aa16.4■□□□□ 0.22
TUBAP4-201ENST00000569261 CUX2O14529 1486 aa16.26■□□□□ 0.19
TUBAP4-201ENST00000569261 NCAPD3P42695 1498 aa16.22■□□□□ 0.19
TUBAP4-201ENST00000569261 ERCC6Q03468 1493 aa16.19■□□□□ 0.18
TUBAP4-201ENST00000569261 ATAD2BQ9ULI0 1458 aa16.14■□□□□ 0.17
TUBAP4-201ENST00000569261 HMGXB3Q12766 1538 aa16.12■□□□□ 0.17
TUBAP4-201ENST00000569261 SMARCA2P51531 1590 aa16.11■□□□□ 0.17
TUBAP4-201ENST00000569261 SMARCA4P51532 1647 aa16.08■□□□□ 0.17
TUBAP4-201ENST00000569261 NESP48681 1621 aa16■□□□□ 0.15
TUBAP4-201ENST00000569261 BAZ1AQ9NRL2 1556 aaPredicted RBP15.98■□□□□ 0.15
TUBAP4-201ENST00000569261 BAZ1BQ9UIG0 1483 aaKnown RBP15.97■□□□□ 0.15
TUBAP4-201ENST00000569261 THOC2Q8NI27 1593 aaKnown RBP15.94■□□□□ 0.14
TUBAP4-201ENST00000569261 PEG3Q9GZU2 1588 aa15.94■□□□□ 0.14
TUBAP4-201ENST00000569261 LAMC3Q9Y6N6 1575 aa15.91■□□□□ 0.14
TUBAP4-201ENST00000569261 KIF21AQ7Z4S6 1674 aa15.82■□□□□ 0.12
TUBAP4-201ENST00000569261 MROH2BQ7Z745 1585 aa15.81■□□□□ 0.12
TUBAP4-201ENST00000569261 PDS5BQ9NTI5 1447 aa15.8■□□□□ 0.12
TUBAP4-201ENST00000569261 CADPSQ9ULU8 1353 aa15.7■□□□□ 0.1
TUBAP4-201ENST00000569261 MRC2Q9UBG0 1479 aa15.69■□□□□ 0.1
TUBAP4-201ENST00000569261 WDR62O43379 1518 aa15.68■□□□□ 0.1
TUBAP4-201ENST00000569261 WIZO95785 1651 aa15.6■□□□□ 0.09
TUBAP4-201ENST00000569261 CEP164Q9UPV0 1460 aa15.59■□□□□ 0.09
TUBAP4-201ENST00000569261 TRIM41Q8WV44 630 aa15.58■□□□□ 0.08
TUBAP4-201ENST00000569261 FANCD2Q9BXW9 1451 aa15.53■□□□□ 0.08
TUBAP4-201ENST00000569261 CFTRP13569 1480 aa15.5■□□□□ 0.07
TUBAP4-201ENST00000569261 TOP2AP11388 1531 aaKnown RBP15.43■□□□□ 0.06
TUBAP4-201ENST00000569261 URB2Q14146 1524 aaKnown RBP15.42■□□□□ 0.06
TUBAP4-201ENST00000569261 OSCARQ8IYS5 282 aa15.4■□□□□ 0.06
TUBAP4-201ENST00000569261 RSF1Q96T23 1441 aaPredicted RBP15.4■□□□□ 0.06
TUBAP4-201ENST00000569261 PRDM2Q13029 1718 aa15.36■□□□□ 0.05
TUBAP4-201ENST00000569261 IFT140Q96RY7 1462 aa15.27■□□□□ 0.04
TUBAP4-201ENST00000569261 RIMBP3CA6NJZ7 1639 aa15.27■□□□□ 0.03
TUBAP4-201ENST00000569261 RIMBP3BA6NNM3 1639 aa15.27■□□□□ 0.03
TUBAP4-201ENST00000569261 RIMBP3Q9UFD9 1639 aa15.27■□□□□ 0.03
TUBAP4-201ENST00000569261 ZNF608Q9ULD9 1512 aaPredicted RBP15.24■□□□□ 0.03
TUBAP4-201ENST00000569261 TOPBP1Q92547 1522 aa15.22■□□□□ 0.03
TUBAP4-201ENST00000569261 CCDC88BA6NC98 1476 aa15.21■□□□□ 0.03
TUBAP4-201ENST00000569261 ARHGEF11O15085 1522 aa15.21■□□□□ 0.03
TUBAP4-201ENST00000569261 EIF4G3O43432 1585 aaKnown RBP15.19■□□□□ 0.02
TUBAP4-201ENST00000569261 ABCC8Q09428 1581 aa15.19■□□□□ 0.02
TUBAP4-201ENST00000569261 DNMBPQ6XZF7 1577 aa15.16■□□□□ 0.02
TUBAP4-201ENST00000569261 TARBP1Q13395 1621 aaKnown RBP15.11■□□□□ 0.01
TUBAP4-201ENST00000569261 CHD1O14646 1710 aa15.1■□□□□ 0.01
TUBAP4-201ENST00000569261 AQRO60306 1485 aaKnown RBP eCLIP15.07■□□□□ 0
TUBAP4-201ENST00000569261 POLA1P09884 1462 aaPredicted RBP15.05■□□□□ -0
TUBAP4-201ENST00000569261 ARAP1Q96P48 1450 aa15.04■□□□□ -0
TUBAP4-201ENST00000569261 CYB5RLQ6IPT4 315 aa15.04■□□□□ -0
TUBAP4-201ENST00000569261 WDR97A6NE52 1622 aa14.99□□□□□ -0.01
TUBAP4-201ENST00000569261 FBLN2P98095 1184 aa14.98□□□□□ -0.01
TUBAP4-201ENST00000569261 RAD54L2Q9Y4B4 1467 aa14.96□□□□□ -0.01
TUBAP4-201ENST00000569261 SNAPC4Q5SXM2 1469 aa14.95□□□□□ -0.02
TUBAP4-201ENST00000569261 SOGA1O94964 1423 aa14.94□□□□□ -0.02
TUBAP4-201ENST00000569261 CLASP1Q7Z460 1538 aa14.94□□□□□ -0.02
TUBAP4-201ENST00000569261 TRHP20396 242 aaPredicted RBP14.94□□□□□ -0.02
TUBAP4-201ENST00000569261 TDRD9Q8NDG6 1382 aaKnown RBP14.93□□□□□ -0.02
TUBAP4-201ENST00000569261 FGD5Q6ZNL6 1462 aa14.92□□□□□ -0.02
TUBAP4-201ENST00000569261 MAGI1Q96QZ7 1491 aaPredicted RBP14.92□□□□□ -0.02
TUBAP4-201ENST00000569261 SYNJ1O43426 1573 aa14.91□□□□□ -0.02
TUBAP4-201ENST00000569261 CUX1P39880 1505 aa14.88□□□□□ -0.03
TUBAP4-201ENST00000569261 GRIN2BQ13224 1484 aa14.88□□□□□ -0.03
TUBAP4-201ENST00000569261 SYNJ2O15056 1496 aa14.86□□□□□ -0.03
TUBAP4-201ENST00000569261 CHMP7Q8WUX9 453 aaPredicted RBP14.85□□□□□ -0.03
TUBAP4-201ENST00000569261 PBRM1Q86U86 1689 aa14.82□□□□□ -0.04
TUBAP4-201ENST00000569261 GAPVD1Q14C86 1478 aa14.79□□□□□ -0.04
TUBAP4-201ENST00000569261 ABCA5Q8WWZ7 1642 aa14.77□□□□□ -0.05
TUBAP4-201ENST00000569261 ABCA10Q8WWZ4 1543 aa14.76□□□□□ -0.05
TUBAP4-201ENST00000569261 GRIN2AQ12879 1464 aa14.69□□□□□ -0.06
TUBAP4-201ENST00000569261 ADAMTS12P58397 1594 aa14.68□□□□□ -0.06
TUBAP4-201ENST00000569261 AEBP2Q6ZN18 517 aaPredicted RBP14.67□□□□□ -0.06
TUBAP4-201ENST00000569261 NUP160Q12769 1436 aa14.66□□□□□ -0.06
TUBAP4-201ENST00000569261 ERCC6L2Q5T890 1561 aa14.65□□□□□ -0.06
TUBAP4-201ENST00000569261 WRNQ14191 1432 aaPredicted RBP eCLIP14.65□□□□□ -0.06
TUBAP4-201ENST00000569261 CEP170Q5SW79 1584 aa14.64□□□□□ -0.07
TUBAP4-201ENST00000569261 SHROOM2Q13796 1616 aa14.63□□□□□ -0.07
TUBAP4-201ENST00000569261 BIVM-ERCC5R4GMW8 1640 aa14.6□□□□□ -0.07
TUBAP4-201ENST00000569261 TOP2BQ02880 1626 aa14.59□□□□□ -0.07
TUBAP4-201ENST00000569261 FHAD1B1AJZ9 1412 aa14.59□□□□□ -0.07
TUBAP4-201ENST00000569261 ERICH3Q5RHP9 1530 aa14.57□□□□□ -0.08
TUBAP4-201ENST00000569261 KIF13AQ9H1H9 1805 aa14.52□□□□□ -0.09
TUBAP4-201ENST00000569261 PRG4Q92954 1404 aaPredicted RBP14.49□□□□□ -0.09
TUBAP4-201ENST00000569261 RUSC2Q8N2Y8 1516 aa14.48□□□□□ -0.09
TUBAP4-201ENST00000569261 SUPT5HO00267 1087 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms