RNA–Protein interactions for RNA: ENST00000569251.5

SCAMP2-211, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 867 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-211ENST00000569251 NISCHQ9Y2I1 1504 aa32.17■■■□□ 2.74
SCAMP2-211ENST00000569251 CCDC180Q9P1Z9 1646 aa28.86■■■□□ 2.21
SCAMP2-211ENST00000569251 ABCC9O60706 1549 aa28.59■■■□□ 2.17
SCAMP2-211ENST00000569251 RB1CC1Q8TDY2 1594 aa27.32■■□□□ 1.96
SCAMP2-211ENST00000569251 NACADO15069 1562 aa27.19■■□□□ 1.94
SCAMP2-211ENST00000569251 DCAF8L2P0C7V8 631 aa26.98■■□□□ 1.91
SCAMP2-211ENST00000569251 MYO15BQ96JP2 1530 aa26.88■■□□□ 1.89
SCAMP2-211ENST00000569251 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
SCAMP2-211ENST00000569251 ZCCHC6Q5VYS8 1495 aaKnown RBP26.69■■□□□ 1.86
SCAMP2-211ENST00000569251 DNAJC5BQ9UF47 199 aa26.67■■□□□ 1.86
SCAMP2-211ENST00000569251 PABPN1Q86U42 306 aaKnown RBP eCLIP26.61■■□□□ 1.85
SCAMP2-211ENST00000569251 DCAF1Q9Y4B6 1507 aa26.6■■□□□ 1.85
SCAMP2-211ENST00000569251 BICRAQ9NZM4 1560 aa26.56■■□□□ 1.84
SCAMP2-211ENST00000569251 SCRIBQ14160 1630 aa26.24■■□□□ 1.79
SCAMP2-211ENST00000569251 SHROOM4Q9ULL8 1493 aa26.18■■□□□ 1.78
SCAMP2-211ENST00000569251 CC2D2AQ9P2K1 1620 aa25.88■■□□□ 1.73
SCAMP2-211ENST00000569251 EIF4G1Q04637 1599 aaKnown RBP25.86■■□□□ 1.73
SCAMP2-211ENST00000569251 CECR2Q9BXF3 1484 aa25.73■■□□□ 1.71
SCAMP2-211ENST00000569251 SMARCA4P51532 1647 aa25.08■■□□□ 1.61
SCAMP2-211ENST00000569251 NCAPD3P42695 1498 aa25.08■■□□□ 1.6
SCAMP2-211ENST00000569251 ATAD2BQ9ULI0 1458 aa25.02■■□□□ 1.6
SCAMP2-211ENST00000569251 SMARCA2P51531 1590 aa24.97■■□□□ 1.59
SCAMP2-211ENST00000569251 BAZ1AQ9NRL2 1556 aaPredicted RBP24.96■■□□□ 1.59
SCAMP2-211ENST00000569251 HMGXB3Q12766 1538 aa24.93■■□□□ 1.58
SCAMP2-211ENST00000569251 PEG3Q9GZU2 1588 aa24.85■■□□□ 1.57
SCAMP2-211ENST00000569251 BAZ1BQ9UIG0 1483 aaKnown RBP24.78■■□□□ 1.56
SCAMP2-211ENST00000569251 MROH2BQ7Z745 1585 aa24.78■■□□□ 1.56
SCAMP2-211ENST00000569251 ERCC6Q03468 1493 aa24.64■■□□□ 1.54
SCAMP2-211ENST00000569251 NESP48681 1621 aa24.62■■□□□ 1.53
SCAMP2-211ENST00000569251 CUX2O14529 1486 aa24.58■■□□□ 1.52
SCAMP2-211ENST00000569251 WIZO95785 1651 aa24.53■■□□□ 1.52
SCAMP2-211ENST00000569251 LAMC3Q9Y6N6 1575 aa24.51■■□□□ 1.51
SCAMP2-211ENST00000569251 KIF21AQ7Z4S6 1674 aa24.4■■□□□ 1.5
SCAMP2-211ENST00000569251 THOC2Q8NI27 1593 aaKnown RBP24.38■■□□□ 1.49
SCAMP2-211ENST00000569251 DNAJC5Q9H3Z4 198 aa24.35■■□□□ 1.49
SCAMP2-211ENST00000569251 RSF1Q96T23 1441 aaPredicted RBP24.32■■□□□ 1.48
SCAMP2-211ENST00000569251 PDS5BQ9NTI5 1447 aa24.32■■□□□ 1.48
SCAMP2-211ENST00000569251 CADPSQ9ULU8 1353 aa24.3■■□□□ 1.48
SCAMP2-211ENST00000569251 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.47
SCAMP2-211ENST00000569251 MRC2Q9UBG0 1479 aa24.1■■□□□ 1.45
SCAMP2-211ENST00000569251 CFTRP13569 1480 aa24.08■■□□□ 1.45
SCAMP2-211ENST00000569251 WDR62O43379 1518 aa24.07■■□□□ 1.44
SCAMP2-211ENST00000569251 CEP164Q9UPV0 1460 aa24.04■■□□□ 1.44
SCAMP2-211ENST00000569251 FANCD2Q9BXW9 1451 aa24.03■■□□□ 1.44
SCAMP2-211ENST00000569251 PRDM2Q13029 1718 aa24■■□□□ 1.43
SCAMP2-211ENST00000569251 CCDC88BA6NC98 1476 aa23.92■■□□□ 1.42
SCAMP2-211ENST00000569251 URB2Q14146 1524 aaKnown RBP23.84■■□□□ 1.41
SCAMP2-211ENST00000569251 TOPBP1Q92547 1522 aa23.61■■□□□ 1.37
SCAMP2-211ENST00000569251 ABCC8Q09428 1581 aa23.57■■□□□ 1.36
SCAMP2-211ENST00000569251 DNMBPQ6XZF7 1577 aa23.56■■□□□ 1.36
SCAMP2-211ENST00000569251 IFT140Q96RY7 1462 aa23.56■■□□□ 1.36
SCAMP2-211ENST00000569251 ZNF608Q9ULD9 1512 aaPredicted RBP23.51■■□□□ 1.35
SCAMP2-211ENST00000569251 OSCARQ8IYS5 282 aa23.45■■□□□ 1.34
SCAMP2-211ENST00000569251 TARBP1Q13395 1621 aaKnown RBP23.44■■□□□ 1.34
SCAMP2-211ENST00000569251 EIF4G3O43432 1585 aaKnown RBP23.42■■□□□ 1.34
SCAMP2-211ENST00000569251 POLA1P09884 1462 aaPredicted RBP23.37■■□□□ 1.33
SCAMP2-211ENST00000569251 SUPT5HO00267 1087 aaKnown RBP23.31■■□□□ 1.32
SCAMP2-211ENST00000569251 AQRO60306 1485 aaKnown RBP eCLIP23.3■■□□□ 1.326e-7■■■□□ 18.3
SCAMP2-211ENST00000569251 TRIM41Q8WV44 630 aa23.3■■□□□ 1.32
SCAMP2-211ENST00000569251 RAD54L2Q9Y4B4 1467 aa23.28■■□□□ 1.32
SCAMP2-211ENST00000569251 CUX1P39880 1505 aa23.28■■□□□ 1.32
SCAMP2-211ENST00000569251 CHD1O14646 1710 aa23.27■■□□□ 1.32
SCAMP2-211ENST00000569251 SOGA1O94964 1423 aa23.25■■□□□ 1.31
SCAMP2-211ENST00000569251 FGD5Q6ZNL6 1462 aa23.25■■□□□ 1.31
SCAMP2-211ENST00000569251 WDR97A6NE52 1622 aa23.2■■□□□ 1.3
SCAMP2-211ENST00000569251 RIMBP3CA6NJZ7 1639 aa23.2■■□□□ 1.3
SCAMP2-211ENST00000569251 RIMBP3BA6NNM3 1639 aa23.2■■□□□ 1.3
SCAMP2-211ENST00000569251 RIMBP3Q9UFD9 1639 aa23.2■■□□□ 1.3
SCAMP2-211ENST00000569251 TDRD9Q8NDG6 1382 aaKnown RBP23.17■■□□□ 1.3
SCAMP2-211ENST00000569251 ARHGEF11O15085 1522 aa23.11■■□□□ 1.29
SCAMP2-211ENST00000569251 SNAPC4Q5SXM2 1469 aa23.07■■□□□ 1.28
SCAMP2-211ENST00000569251 FBLN2P98095 1184 aa23.06■■□□□ 1.28
SCAMP2-211ENST00000569251 PBRM1Q86U86 1689 aa23.06■■□□□ 1.28
SCAMP2-211ENST00000569251 GRIN2BQ13224 1484 aa23.04■■□□□ 1.28
SCAMP2-211ENST00000569251 MAGI1Q96QZ7 1491 aaPredicted RBP23.04■■□□□ 1.28
SCAMP2-211ENST00000569251 ABCA10Q8WWZ4 1543 aa23.01■■□□□ 1.27
SCAMP2-211ENST00000569251 ABCA5Q8WWZ7 1642 aa23■■□□□ 1.27
SCAMP2-211ENST00000569251 BIVM-ERCC5R4GMW8 1640 aa23■■□□□ 1.27
SCAMP2-211ENST00000569251 GAPVD1Q14C86 1478 aa22.99■■□□□ 1.27
SCAMP2-211ENST00000569251 TOP2BQ02880 1626 aa22.98■■□□□ 1.27
SCAMP2-211ENST00000569251 SYNJ2O15056 1496 aa22.95■■□□□ 1.26
SCAMP2-211ENST00000569251 SYNJ1O43426 1573 aa22.95■■□□□ 1.26
SCAMP2-211ENST00000569251 CLASP1Q7Z460 1538 aa22.95■■□□□ 1.26
SCAMP2-211ENST00000569251 CHMP7Q8WUX9 453 aaPredicted RBP22.94■■□□□ 1.26
SCAMP2-211ENST00000569251 WRNQ14191 1432 aaPredicted RBP eCLIP22.92■■□□□ 1.26
SCAMP2-211ENST00000569251 ARAP1Q96P48 1450 aa22.89■■□□□ 1.25
SCAMP2-211ENST00000569251 CYB5RLQ6IPT4 315 aa22.88■■□□□ 1.25
SCAMP2-211ENST00000569251 ADAMTS12P58397 1594 aa22.79■■□□□ 1.24
SCAMP2-211ENST00000569251 GRIN2AQ12879 1464 aa22.75■■□□□ 1.23
SCAMP2-211ENST00000569251 ERICH3Q5RHP9 1530 aa22.73■■□□□ 1.23
SCAMP2-211ENST00000569251 CEP170Q5SW79 1584 aa22.69■■□□□ 1.22
SCAMP2-211ENST00000569251 FHAD1B1AJZ9 1412 aa22.69■■□□□ 1.22
SCAMP2-211ENST00000569251 NUP160Q12769 1436 aa22.67■■□□□ 1.22
SCAMP2-211ENST00000569251 SHROOM2Q13796 1616 aa22.61■■□□□ 1.21
SCAMP2-211ENST00000569251 ERCC6L2Q5T890 1561 aa22.6■■□□□ 1.21
SCAMP2-211ENST00000569251 TRHP20396 242 aaPredicted RBP22.55■■□□□ 1.2
SCAMP2-211ENST00000569251 KIF27Q86VH2 1401 aa22.48■■□□□ 1.19
SCAMP2-211ENST00000569251 CUL7Q14999 1698 aa22.47■■□□□ 1.19
SCAMP2-211ENST00000569251 RUSC2Q8N2Y8 1516 aa22.47■■□□□ 1.19
SCAMP2-211ENST00000569251 IGF1RP08069 1367 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms