RNA–Protein interactions for RNA: ENST00000569226.1

HERC2P9-208, Transcript of hect domain and RLD 2 pseudogene 9, humanhuman

TSL 4

Gene HERC2P9, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P9-208ENST00000569226 NISCHQ9Y2I1 1504 aa36.95■■■■□ 3.51
HERC2P9-208ENST00000569226 CCDC180Q9P1Z9 1646 aa33.02■■■□□ 2.88
HERC2P9-208ENST00000569226 ABCC9O60706 1549 aa32.3■■■□□ 2.76
HERC2P9-208ENST00000569226 RB1CC1Q8TDY2 1594 aa31.03■■■□□ 2.56
HERC2P9-208ENST00000569226 NACADO15069 1562 aa30.93■■■□□ 2.54
HERC2P9-208ENST00000569226 ZCCHC6Q5VYS8 1495 aaKnown RBP30.81■■■□□ 2.52
HERC2P9-208ENST00000569226 DCAF8L2P0C7V8 631 aa30.79■■■□□ 2.52
HERC2P9-208ENST00000569226 MYO15BQ96JP2 1530 aa30.66■■■□□ 2.5
HERC2P9-208ENST00000569226 UNC13AQ9UPW8 1703 aa30.58■■■□□ 2.49
HERC2P9-208ENST00000569226 DCAF1Q9Y4B6 1507 aa30.53■■■□□ 2.48
HERC2P9-208ENST00000569226 BICRAQ9NZM4 1560 aa30.15■■■□□ 2.42
HERC2P9-208ENST00000569226 SCRIBQ14160 1630 aa30.14■■■□□ 2.41
HERC2P9-208ENST00000569226 PABPN1Q86U42 306 aaKnown RBP eCLIP30.06■■■□□ 2.4
HERC2P9-208ENST00000569226 SHROOM4Q9ULL8 1493 aa29.69■■■□□ 2.34
HERC2P9-208ENST00000569226 DNAJC5BQ9UF47 199 aa29.6■■■□□ 2.33
HERC2P9-208ENST00000569226 EIF4G1Q04637 1599 aaKnown RBP29.33■■■□□ 2.29
HERC2P9-208ENST00000569226 CC2D2AQ9P2K1 1620 aa29.26■■■□□ 2.27
HERC2P9-208ENST00000569226 CECR2Q9BXF3 1484 aa28.97■■■□□ 2.23
HERC2P9-208ENST00000569226 SMARCA4P51532 1647 aa28.79■■■□□ 2.2
HERC2P9-208ENST00000569226 BAZ1AQ9NRL2 1556 aaPredicted RBP28.67■■■□□ 2.18
HERC2P9-208ENST00000569226 ATAD2BQ9ULI0 1458 aa28.53■■■□□ 2.16
HERC2P9-208ENST00000569226 MROH2BQ7Z745 1585 aa28.53■■■□□ 2.16
HERC2P9-208ENST00000569226 SMARCA2P51531 1590 aa28.52■■■□□ 2.16
HERC2P9-208ENST00000569226 NCAPD3P42695 1498 aa28.47■■■□□ 2.15
HERC2P9-208ENST00000569226 PEG3Q9GZU2 1588 aa28.44■■■□□ 2.14
HERC2P9-208ENST00000569226 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
HERC2P9-208ENST00000569226 BAZ1BQ9UIG0 1483 aaKnown RBP28.33■■■□□ 2.13
HERC2P9-208ENST00000569226 WIZO95785 1651 aa28.3■■■□□ 2.12
HERC2P9-208ENST00000569226 RSF1Q96T23 1441 aaPredicted RBP28.09■■■□□ 2.09
HERC2P9-208ENST00000569226 NESP48681 1621 aa27.95■■■□□ 2.06
HERC2P9-208ENST00000569226 TOP2AP11388 1531 aaKnown RBP27.92■■■□□ 2.06
HERC2P9-208ENST00000569226 LAMC3Q9Y6N6 1575 aa27.84■■■□□ 2.05
HERC2P9-208ENST00000569226 ERCC6Q03468 1493 aa27.8■■■□□ 2.04
HERC2P9-208ENST00000569226 KIF21AQ7Z4S6 1674 aa27.76■■■□□ 2.03
HERC2P9-208ENST00000569226 CADPSQ9ULU8 1353 aa27.62■■■□□ 2.01
HERC2P9-208ENST00000569226 THOC2Q8NI27 1593 aaKnown RBP27.62■■■□□ 2.01
HERC2P9-208ENST00000569226 PRDM2Q13029 1718 aa27.58■■■□□ 2.01
HERC2P9-208ENST00000569226 PDS5BQ9NTI5 1447 aa27.53■■■□□ 2
HERC2P9-208ENST00000569226 CCDC88BA6NC98 1476 aa27.52■■■□□ 2
HERC2P9-208ENST00000569226 CUX2O14529 1486 aa27.51■■□□□ 1.99
HERC2P9-208ENST00000569226 CFTRP13569 1480 aa27.49■■□□□ 1.99
HERC2P9-208ENST00000569226 FANCD2Q9BXW9 1451 aa27.39■■□□□ 1.98
HERC2P9-208ENST00000569226 CEP164Q9UPV0 1460 aa27.38■■□□□ 1.97
HERC2P9-208ENST00000569226 MRC2Q9UBG0 1479 aa27.36■■□□□ 1.97
HERC2P9-208ENST00000569226 WDR62O43379 1518 aa27.31■■□□□ 1.96
HERC2P9-208ENST00000569226 SUPT5HO00267 1087 aaKnown RBP27.29■■□□□ 1.96
HERC2P9-208ENST00000569226 URB2Q14146 1524 aaKnown RBP27.17■■□□□ 1.94
HERC2P9-208ENST00000569226 TOPBP1Q92547 1522 aa26.98■■□□□ 1.91
HERC2P9-208ENST00000569226 DNMBPQ6XZF7 1577 aa26.97■■□□□ 1.91
HERC2P9-208ENST00000569226 ABCC8Q09428 1581 aa26.86■■□□□ 1.89
HERC2P9-208ENST00000569226 CUX1P39880 1505 aa26.78■■□□□ 1.88
HERC2P9-208ENST00000569226 IFT140Q96RY7 1462 aa26.76■■□□□ 1.87
HERC2P9-208ENST00000569226 TARBP1Q13395 1621 aaKnown RBP26.75■■□□□ 1.87
HERC2P9-208ENST00000569226 POLA1P09884 1462 aaPredicted RBP26.74■■□□□ 1.87
HERC2P9-208ENST00000569226 ZNF608Q9ULD9 1512 aaPredicted RBP26.72■■□□□ 1.87
HERC2P9-208ENST00000569226 EIF4G3O43432 1585 aaKnown RBP26.71■■□□□ 1.87
HERC2P9-208ENST00000569226 FGD5Q6ZNL6 1462 aa26.68■■□□□ 1.86
HERC2P9-208ENST00000569226 DNAJC5Q9H3Z4 198 aa26.63■■□□□ 1.85
HERC2P9-208ENST00000569226 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
HERC2P9-208ENST00000569226 WDR97A6NE52 1622 aa26.62■■□□□ 1.85
HERC2P9-208ENST00000569226 BIVM-ERCC5R4GMW8 1640 aa26.59■■□□□ 1.85
HERC2P9-208ENST00000569226 SYNJ1O43426 1573 aa26.58■■□□□ 1.85
HERC2P9-208ENST00000569226 TOP2BQ02880 1626 aa26.54■■□□□ 1.84
HERC2P9-208ENST00000569226 SOGA1O94964 1423 aa26.53■■□□□ 1.84
HERC2P9-208ENST00000569226 AQRO60306 1485 aaKnown RBP eCLIP26.5■■□□□ 1.83
HERC2P9-208ENST00000569226 WRNQ14191 1432 aaPredicted RBP eCLIP26.49■■□□□ 1.83
HERC2P9-208ENST00000569226 CHD1O14646 1710 aa26.47■■□□□ 1.83
HERC2P9-208ENST00000569226 PBRM1Q86U86 1689 aa26.45■■□□□ 1.82
HERC2P9-208ENST00000569226 TDRD9Q8NDG6 1382 aaKnown RBP26.42■■□□□ 1.82
HERC2P9-208ENST00000569226 ABCA5Q8WWZ7 1642 aa26.39■■□□□ 1.82
HERC2P9-208ENST00000569226 ABCA10Q8WWZ4 1543 aa26.37■■□□□ 1.81
HERC2P9-208ENST00000569226 SNAPC4Q5SXM2 1469 aa26.31■■□□□ 1.8
HERC2P9-208ENST00000569226 GAPVD1Q14C86 1478 aa26.28■■□□□ 1.8
HERC2P9-208ENST00000569226 GRIN2BQ13224 1484 aa26.27■■□□□ 1.8
HERC2P9-208ENST00000569226 OSCARQ8IYS5 282 aa26.23■■□□□ 1.79
HERC2P9-208ENST00000569226 MAGI1Q96QZ7 1491 aaPredicted RBP26.23■■□□□ 1.79
HERC2P9-208ENST00000569226 ADAMTS12P58397 1594 aa26.15■■□□□ 1.78
HERC2P9-208ENST00000569226 FBLN2P98095 1184 aa26.14■■□□□ 1.78
HERC2P9-208ENST00000569226 SYNJ2O15056 1496 aa26.12■■□□□ 1.77
HERC2P9-208ENST00000569226 RIMBP3CA6NJZ7 1639 aa26.08■■□□□ 1.77
HERC2P9-208ENST00000569226 RIMBP3BA6NNM3 1639 aa26.08■■□□□ 1.77
HERC2P9-208ENST00000569226 RIMBP3Q9UFD9 1639 aa26.08■■□□□ 1.77
HERC2P9-208ENST00000569226 ERICH3Q5RHP9 1530 aa26.07■■□□□ 1.76
HERC2P9-208ENST00000569226 CLASP1Q7Z460 1538 aa26.04■■□□□ 1.76
HERC2P9-208ENST00000569226 CHMP7Q8WUX9 453 aaPredicted RBP26.01■■□□□ 1.75
HERC2P9-208ENST00000569226 ARHGEF11O15085 1522 aa26■■□□□ 1.75
HERC2P9-208ENST00000569226 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
HERC2P9-208ENST00000569226 FHAD1B1AJZ9 1412 aa25.94■■□□□ 1.74
HERC2P9-208ENST00000569226 CEP170Q5SW79 1584 aa25.93■■□□□ 1.74
HERC2P9-208ENST00000569226 KIF27Q86VH2 1401 aa25.91■■□□□ 1.74
HERC2P9-208ENST00000569226 CUL7Q14999 1698 aa25.9■■□□□ 1.74
HERC2P9-208ENST00000569226 NUP160Q12769 1436 aa25.83■■□□□ 1.73
HERC2P9-208ENST00000569226 TRIM41Q8WV44 630 aa25.83■■□□□ 1.73
HERC2P9-208ENST00000569226 ARAP1Q96P48 1450 aa25.79■■□□□ 1.72
HERC2P9-208ENST00000569226 RUSC2Q8N2Y8 1516 aa25.78■■□□□ 1.72
HERC2P9-208ENST00000569226 IGF1RP08069 1367 aa25.77■■□□□ 1.72
HERC2P9-208ENST00000569226 SHROOM2Q13796 1616 aa25.76■■□□□ 1.71
HERC2P9-208ENST00000569226 ERCC6L2Q5T890 1561 aa25.72■■□□□ 1.71
HERC2P9-208ENST00000569226 CARMIL1Q5VZK9 1371 aa25.64■■□□□ 1.69
HERC2P9-208ENST00000569226 CYB5RLQ6IPT4 315 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms