RNA–Protein interactions for RNA: ENST00000569222.5

KIFC3-233, Transcript of kinesin family member C3, humanhuman

TSL 3

Gene KIFC3, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-233ENST00000569222 NISCHQ9Y2I1 1504 aa33.02■■■□□ 2.88
KIFC3-233ENST00000569222 CCDC180Q9P1Z9 1646 aa29.42■■■□□ 2.3
KIFC3-233ENST00000569222 ABCC9O60706 1549 aa28.59■■■□□ 2.17
KIFC3-233ENST00000569222 ZCCHC6Q5VYS8 1495 aaKnown RBP27.58■■■□□ 2.01
KIFC3-233ENST00000569222 NACADO15069 1562 aa27.58■■■□□ 2.01
KIFC3-233ENST00000569222 RB1CC1Q8TDY2 1594 aa27.58■■■□□ 2.01
KIFC3-233ENST00000569222 MYO15BQ96JP2 1530 aa27.51■■□□□ 1.99
KIFC3-233ENST00000569222 DCAF1Q9Y4B6 1507 aa27.4■■□□□ 1.98
KIFC3-233ENST00000569222 DCAF8L2P0C7V8 631 aa27.21■■□□□ 1.95
KIFC3-233ENST00000569222 UNC13AQ9UPW8 1703 aa27.05■■□□□ 1.92
KIFC3-233ENST00000569222 BICRAQ9NZM4 1560 aa26.84■■□□□ 1.89
KIFC3-233ENST00000569222 SCRIBQ14160 1630 aa26.76■■□□□ 1.87
KIFC3-233ENST00000569222 PABPN1Q86U42 306 aaKnown RBP eCLIP26.62■■□□□ 1.85
KIFC3-233ENST00000569222 SHROOM4Q9ULL8 1493 aa26.57■■□□□ 1.84
KIFC3-233ENST00000569222 DNAJC5BQ9UF47 199 aa26.18■■□□□ 1.78
KIFC3-233ENST00000569222 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
KIFC3-233ENST00000569222 CC2D2AQ9P2K1 1620 aa25.93■■□□□ 1.74
KIFC3-233ENST00000569222 CECR2Q9BXF3 1484 aa25.7■■□□□ 1.7
KIFC3-233ENST00000569222 SMARCA4P51532 1647 aa25.65■■□□□ 1.7
KIFC3-233ENST00000569222 BAZ1AQ9NRL2 1556 aaPredicted RBP25.58■■□□□ 1.69
KIFC3-233ENST00000569222 PEG3Q9GZU2 1588 aa25.46■■□□□ 1.67
KIFC3-233ENST00000569222 ATAD2BQ9ULI0 1458 aa25.46■■□□□ 1.67
KIFC3-233ENST00000569222 MROH2BQ7Z745 1585 aa25.45■■□□□ 1.66
KIFC3-233ENST00000569222 NCAPD3P42695 1498 aa25.44■■□□□ 1.66
KIFC3-233ENST00000569222 SMARCA2P51531 1590 aa25.43■■□□□ 1.66
KIFC3-233ENST00000569222 HMGXB3Q12766 1538 aa25.38■■□□□ 1.65
KIFC3-233ENST00000569222 BAZ1BQ9UIG0 1483 aaKnown RBP25.21■■□□□ 1.63
KIFC3-233ENST00000569222 WIZO95785 1651 aa25.17■■□□□ 1.62
KIFC3-233ENST00000569222 RSF1Q96T23 1441 aaPredicted RBP25.15■■□□□ 1.62
KIFC3-233ENST00000569222 TOP2AP11388 1531 aaKnown RBP24.94■■□□□ 1.58
KIFC3-233ENST00000569222 NESP48681 1621 aa24.79■■□□□ 1.56
KIFC3-233ENST00000569222 LAMC3Q9Y6N6 1575 aa24.77■■□□□ 1.56
KIFC3-233ENST00000569222 CADPSQ9ULU8 1353 aa24.64■■□□□ 1.53
KIFC3-233ENST00000569222 ERCC6Q03468 1493 aa24.59■■□□□ 1.53
KIFC3-233ENST00000569222 CCDC88BA6NC98 1476 aa24.58■■□□□ 1.52
KIFC3-233ENST00000569222 CFTRP13569 1480 aa24.58■■□□□ 1.52
KIFC3-233ENST00000569222 KIF21AQ7Z4S6 1674 aa24.56■■□□□ 1.52
KIFC3-233ENST00000569222 THOC2Q8NI27 1593 aaKnown RBP24.52■■□□□ 1.52
KIFC3-233ENST00000569222 PDS5BQ9NTI5 1447 aa24.51■■□□□ 1.51
KIFC3-233ENST00000569222 PRDM2Q13029 1718 aa24.47■■□□□ 1.51
KIFC3-233ENST00000569222 CUX2O14529 1486 aa24.42■■□□□ 1.5
KIFC3-233ENST00000569222 FANCD2Q9BXW9 1451 aa24.38■■□□□ 1.49
KIFC3-233ENST00000569222 CEP164Q9UPV0 1460 aa24.35■■□□□ 1.49
KIFC3-233ENST00000569222 MRC2Q9UBG0 1479 aa24.32■■□□□ 1.48
KIFC3-233ENST00000569222 WDR62O43379 1518 aa24.31■■□□□ 1.48
KIFC3-233ENST00000569222 SUPT5HO00267 1087 aaKnown RBP24.29■■□□□ 1.48
KIFC3-233ENST00000569222 URB2Q14146 1524 aaKnown RBP24.19■■□□□ 1.46
KIFC3-233ENST00000569222 TOPBP1Q92547 1522 aa24.03■■□□□ 1.44
KIFC3-233ENST00000569222 DNMBPQ6XZF7 1577 aa24.03■■□□□ 1.44
KIFC3-233ENST00000569222 ABCC8Q09428 1581 aa23.97■■□□□ 1.43
KIFC3-233ENST00000569222 CUX1P39880 1505 aa23.89■■□□□ 1.42
KIFC3-233ENST00000569222 POLA1P09884 1462 aaPredicted RBP23.84■■□□□ 1.41
KIFC3-233ENST00000569222 IFT140Q96RY7 1462 aa23.84■■□□□ 1.41
KIFC3-233ENST00000569222 TARBP1Q13395 1621 aaKnown RBP23.83■■□□□ 1.41
KIFC3-233ENST00000569222 FGD5Q6ZNL6 1462 aa23.76■■□□□ 1.39
KIFC3-233ENST00000569222 ZNF608Q9ULD9 1512 aaPredicted RBP23.75■■□□□ 1.39
KIFC3-233ENST00000569222 BIVM-ERCC5R4GMW8 1640 aa23.73■■□□□ 1.39
KIFC3-233ENST00000569222 EIF4G3O43432 1585 aaKnown RBP23.71■■□□□ 1.39
KIFC3-233ENST00000569222 TOP2BQ02880 1626 aa23.7■■□□□ 1.39
KIFC3-233ENST00000569222 SYNJ1O43426 1573 aa23.7■■□□□ 1.38
KIFC3-233ENST00000569222 WDR97A6NE52 1622 aa23.7■■□□□ 1.38
KIFC3-233ENST00000569222 RAD54L2Q9Y4B4 1467 aa23.68■■□□□ 1.38
KIFC3-233ENST00000569222 WRNQ14191 1432 aaPredicted RBP eCLIP23.67■■□□□ 1.38
KIFC3-233ENST00000569222 SOGA1O94964 1423 aa23.63■■□□□ 1.37
KIFC3-233ENST00000569222 ABCA10Q8WWZ4 1543 aa23.56■■□□□ 1.36
KIFC3-233ENST00000569222 AQRO60306 1485 aaKnown RBP eCLIP23.56■■□□□ 1.363e-9■■■■■ 42.8
KIFC3-233ENST00000569222 ABCA5Q8WWZ7 1642 aa23.53■■□□□ 1.36
KIFC3-233ENST00000569222 DNAJC5Q9H3Z4 198 aa23.51■■□□□ 1.35
KIFC3-233ENST00000569222 TDRD9Q8NDG6 1382 aaKnown RBP23.49■■□□□ 1.35
KIFC3-233ENST00000569222 PBRM1Q86U86 1689 aa23.44■■□□□ 1.34
KIFC3-233ENST00000569222 GRIN2BQ13224 1484 aa23.41■■□□□ 1.34
KIFC3-233ENST00000569222 GAPVD1Q14C86 1478 aa23.41■■□□□ 1.34
KIFC3-233ENST00000569222 SNAPC4Q5SXM2 1469 aa23.39■■□□□ 1.34
KIFC3-233ENST00000569222 MAGI1Q96QZ7 1491 aaPredicted RBP23.38■■□□□ 1.33
KIFC3-233ENST00000569222 CHD1O14646 1710 aa23.38■■□□□ 1.33
KIFC3-233ENST00000569222 ADAMTS12P58397 1594 aa23.28■■□□□ 1.32
KIFC3-233ENST00000569222 SYNJ2O15056 1496 aa23.28■■□□□ 1.32
KIFC3-233ENST00000569222 ERICH3Q5RHP9 1530 aa23.28■■□□□ 1.32
KIFC3-233ENST00000569222 OSCARQ8IYS5 282 aa23.23■■□□□ 1.31
KIFC3-233ENST00000569222 CLASP1Q7Z460 1538 aa23.18■■□□□ 1.3
KIFC3-233ENST00000569222 KIF27Q86VH2 1401 aa23.15■■□□□ 1.3
KIFC3-233ENST00000569222 GRIN2AQ12879 1464 aa23.14■■□□□ 1.29
KIFC3-233ENST00000569222 FHAD1B1AJZ9 1412 aa23.14■■□□□ 1.29
KIFC3-233ENST00000569222 CUL7Q14999 1698 aa23.09■■□□□ 1.29
KIFC3-233ENST00000569222 FBLN2P98095 1184 aa23.08■■□□□ 1.29
KIFC3-233ENST00000569222 CHMP7Q8WUX9 453 aaPredicted RBP23.08■■□□□ 1.29
KIFC3-233ENST00000569222 NUP160Q12769 1436 aa23.08■■□□□ 1.28
KIFC3-233ENST00000569222 CEP170Q5SW79 1584 aa23.06■■□□□ 1.28
KIFC3-233ENST00000569222 IGF1RP08069 1367 aa23.06■■□□□ 1.28
KIFC3-233ENST00000569222 RIMBP3CA6NJZ7 1639 aa23.04■■□□□ 1.28
KIFC3-233ENST00000569222 RIMBP3BA6NNM3 1639 aa23.04■■□□□ 1.28
KIFC3-233ENST00000569222 RIMBP3Q9UFD9 1639 aa23.04■■□□□ 1.28
KIFC3-233ENST00000569222 ARHGEF11O15085 1522 aa23.04■■□□□ 1.28
KIFC3-233ENST00000569222 RUSC2Q8N2Y8 1516 aa22.98■■□□□ 1.27
KIFC3-233ENST00000569222 TRIM41Q8WV44 630 aa22.96■■□□□ 1.27
KIFC3-233ENST00000569222 SHROOM2Q13796 1616 aa22.94■■□□□ 1.26
KIFC3-233ENST00000569222 CARMIL1Q5VZK9 1371 aa22.89■■□□□ 1.25
KIFC3-233ENST00000569222 ARAP1Q96P48 1450 aa22.88■■□□□ 1.25
KIFC3-233ENST00000569222 ERCC6L2Q5T890 1561 aa22.82■■□□□ 1.24
KIFC3-233ENST00000569222 PRXQ9BXM0 1461 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms