RNA–Protein interactions for RNA: ENST00000569161.1

PML-219, Transcript of promyelocytic leukemia, humanhuman

TSL 3

Gene PML, Length 675 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PML-219ENST00000569161 NISCHQ9Y2I1 1504 aa42.55■■■■■ 4.4
PML-219ENST00000569161 CCDC180Q9P1Z9 1646 aa37.76■■■■□ 3.63
PML-219ENST00000569161 ABCC9O60706 1549 aa37.56■■■■□ 3.6
PML-219ENST00000569161 RB1CC1Q8TDY2 1594 aa35.64■■■■□ 3.3
PML-219ENST00000569161 ZCCHC6Q5VYS8 1495 aaKnown RBP35.48■■■■□ 3.27
PML-219ENST00000569161 NACADO15069 1562 aa35.46■■■■□ 3.27
PML-219ENST00000569161 DCAF8L2P0C7V8 631 aa35.45■■■■□ 3.27
PML-219ENST00000569161 DNAJC5BQ9UF47 199 aa35.36■■■■□ 3.25
PML-219ENST00000569161 MYO15BQ96JP2 1530 aa35.28■■■■□ 3.24
PML-219ENST00000569161 DCAF1Q9Y4B6 1507 aa35.19■■■■□ 3.22
PML-219ENST00000569161 PABPN1Q86U42 306 aaKnown RBP eCLIP35.05■■■■□ 3.2
PML-219ENST00000569161 UNC13AQ9UPW8 1703 aa34.81■■■■□ 3.16
PML-219ENST00000569161 BICRAQ9NZM4 1560 aa34.61■■■■□ 3.13
PML-219ENST00000569161 SCRIBQ14160 1630 aa34.49■■■■□ 3.11
PML-219ENST00000569161 SHROOM4Q9ULL8 1493 aa34.05■■■■□ 3.04
PML-219ENST00000569161 CC2D2AQ9P2K1 1620 aa33.87■■■■□ 3.01
PML-219ENST00000569161 CECR2Q9BXF3 1484 aa33.82■■■■□ 3
PML-219ENST00000569161 EIF4G1Q04637 1599 aaKnown RBP33.77■■■■□ 3
PML-219ENST00000569161 SMARCA4P51532 1647 aa33■■■□□ 2.87
PML-219ENST00000569161 BAZ1AQ9NRL2 1556 aaPredicted RBP32.94■■■□□ 2.86
PML-219ENST00000569161 DNAJC5Q9H3Z4 198 aa32.86■■■□□ 2.85
PML-219ENST00000569161 MROH2BQ7Z745 1585 aa32.83■■■□□ 2.85
PML-219ENST00000569161 ATAD2BQ9ULI0 1458 aa32.79■■■□□ 2.84
PML-219ENST00000569161 NCAPD3P42695 1498 aa32.74■■■□□ 2.83
PML-219ENST00000569161 SMARCA2P51531 1590 aa32.7■■■□□ 2.83
PML-219ENST00000569161 PEG3Q9GZU2 1588 aa32.67■■■□□ 2.82
PML-219ENST00000569161 HMGXB3Q12766 1538 aa32.57■■■□□ 2.8
PML-219ENST00000569161 BAZ1BQ9UIG0 1483 aaKnown RBP32.48■■■□□ 2.79
PML-219ENST00000569161 WIZO95785 1651 aa32.48■■■□□ 2.79
PML-219ENST00000569161 RSF1Q96T23 1441 aaPredicted RBP32.47■■■□□ 2.79
PML-219ENST00000569161 ERCC6Q03468 1493 aa32.42■■■□□ 2.78
PML-219ENST00000569161 CUX2O14529 1486 aa32.31■■■□□ 2.76
PML-219ENST00000569161 NESP48681 1621 aa32.25■■■□□ 2.75
PML-219ENST00000569161 TOP2AP11388 1531 aaKnown RBP32.1■■■□□ 2.73
PML-219ENST00000569161 LAMC3Q9Y6N6 1575 aa31.93■■■□□ 2.7
PML-219ENST00000569161 THOC2Q8NI27 1593 aaKnown RBP31.82■■■□□ 2.68
PML-219ENST00000569161 PDS5BQ9NTI5 1447 aa31.8■■■□□ 2.68
PML-219ENST00000569161 CADPSQ9ULU8 1353 aa31.78■■■□□ 2.68
PML-219ENST00000569161 KIF21AQ7Z4S6 1674 aa31.76■■■□□ 2.67
PML-219ENST00000569161 CCDC88BA6NC98 1476 aa31.75■■■□□ 2.67
PML-219ENST00000569161 SUPT5HO00267 1087 aaKnown RBP31.71■■■□□ 2.67
PML-219ENST00000569161 CFTRP13569 1480 aa31.63■■■□□ 2.65
PML-219ENST00000569161 MRC2Q9UBG0 1479 aa31.51■■■□□ 2.63
PML-219ENST00000569161 FANCD2Q9BXW9 1451 aa31.42■■■□□ 2.62
PML-219ENST00000569161 PRDM2Q13029 1718 aa31.41■■■□□ 2.62
PML-219ENST00000569161 WDR62O43379 1518 aa31.39■■■□□ 2.62
PML-219ENST00000569161 CEP164Q9UPV0 1460 aa31.38■■■□□ 2.61
PML-219ENST00000569161 URB2Q14146 1524 aaKnown RBP31.14■■■□□ 2.57
PML-219ENST00000569161 TRIM41Q8WV44 630 aa31.1■■■□□ 2.57
PML-219ENST00000569161 OSCARQ8IYS5 282 aa30.96■■■□□ 2.55
PML-219ENST00000569161 TOPBP1Q92547 1522 aa30.94■■■□□ 2.54
PML-219ENST00000569161 DNMBPQ6XZF7 1577 aa30.91■■■□□ 2.54
PML-219ENST00000569161 ABCC8Q09428 1581 aa30.88■■■□□ 2.53
PML-219ENST00000569161 CUX1P39880 1505 aa30.78■■■□□ 2.52
PML-219ENST00000569161 IFT140Q96RY7 1462 aa30.76■■■□□ 2.51
PML-219ENST00000569161 ZNF608Q9ULD9 1512 aaPredicted RBP30.75■■■□□ 2.51
PML-219ENST00000569161 POLA1P09884 1462 aaPredicted RBP30.7■■■□□ 2.5
PML-219ENST00000569161 FGD5Q6ZNL6 1462 aa30.63■■■□□ 2.49
PML-219ENST00000569161 TARBP1Q13395 1621 aaKnown RBP30.62■■■□□ 2.49
PML-219ENST00000569161 RAD54L2Q9Y4B4 1467 aa30.58■■■□□ 2.49
PML-219ENST00000569161 WRNQ14191 1432 aaPredicted RBP eCLIP30.58■■■□□ 2.49
PML-219ENST00000569161 SYNJ1O43426 1573 aa30.56■■■□□ 2.48
PML-219ENST00000569161 SOGA1O94964 1423 aa30.55■■■□□ 2.48
PML-219ENST00000569161 TOP2BQ02880 1626 aa30.52■■■□□ 2.48
PML-219ENST00000569161 BIVM-ERCC5R4GMW8 1640 aa30.52■■■□□ 2.48
PML-219ENST00000569161 EIF4G3O43432 1585 aaKnown RBP30.5■■■□□ 2.47
PML-219ENST00000569161 AQRO60306 1485 aaKnown RBP eCLIP30.5■■■□□ 2.472e-6■■■■■ 26.9
PML-219ENST00000569161 RIMBP3CA6NJZ7 1639 aa30.46■■■□□ 2.47
PML-219ENST00000569161 RIMBP3BA6NNM3 1639 aa30.46■■■□□ 2.47
PML-219ENST00000569161 RIMBP3Q9UFD9 1639 aa30.46■■■□□ 2.47
PML-219ENST00000569161 WDR97A6NE52 1622 aa30.4■■■□□ 2.46
PML-219ENST00000569161 FBLN2P98095 1184 aa30.4■■■□□ 2.46
PML-219ENST00000569161 TDRD9Q8NDG6 1382 aaKnown RBP30.38■■■□□ 2.45
PML-219ENST00000569161 ARHGEF11O15085 1522 aa30.37■■■□□ 2.45
PML-219ENST00000569161 ABCA10Q8WWZ4 1543 aa30.33■■■□□ 2.45
PML-219ENST00000569161 CHD1O14646 1710 aa30.3■■■□□ 2.44
PML-219ENST00000569161 CYB5RLQ6IPT4 315 aa30.28■■■□□ 2.44
PML-219ENST00000569161 ABCA5Q8WWZ7 1642 aa30.22■■■□□ 2.43
PML-219ENST00000569161 GAPVD1Q14C86 1478 aa30.19■■■□□ 2.42
PML-219ENST00000569161 GRIN2BQ13224 1484 aa30.17■■■□□ 2.42
PML-219ENST00000569161 PBRM1Q86U86 1689 aa30.15■■■□□ 2.42
PML-219ENST00000569161 SNAPC4Q5SXM2 1469 aa30.13■■■□□ 2.41
PML-219ENST00000569161 CHMP7Q8WUX9 453 aaPredicted RBP30.12■■■□□ 2.41
PML-219ENST00000569161 ARAP1Q96P48 1450 aa30.06■■■□□ 2.4
PML-219ENST00000569161 MAGI1Q96QZ7 1491 aaPredicted RBP30.06■■■□□ 2.4
PML-219ENST00000569161 TRHP20396 242 aaPredicted RBP29.98■■■□□ 2.39
PML-219ENST00000569161 SYNJ2O15056 1496 aa29.96■■■□□ 2.39
PML-219ENST00000569161 ERICH3Q5RHP9 1530 aa29.96■■■□□ 2.39
PML-219ENST00000569161 CLASP1Q7Z460 1538 aa29.94■■■□□ 2.38
PML-219ENST00000569161 ADAMTS12P58397 1594 aa29.92■■■□□ 2.38
PML-219ENST00000569161 KIF27Q86VH2 1401 aa29.91■■■□□ 2.38
PML-219ENST00000569161 FHAD1B1AJZ9 1412 aa29.84■■■□□ 2.37
PML-219ENST00000569161 IGF1RP08069 1367 aa29.82■■■□□ 2.36
PML-219ENST00000569161 GRIN2AQ12879 1464 aa29.8■■■□□ 2.36
PML-219ENST00000569161 RUSC2Q8N2Y8 1516 aa29.78■■■□□ 2.36
PML-219ENST00000569161 CUL7Q14999 1698 aa29.7■■■□□ 2.35
PML-219ENST00000569161 CHIC1Q5VXU3 224 aa29.69■■■□□ 2.34
PML-219ENST00000569161 CEP170Q5SW79 1584 aa29.68■■■□□ 2.34
PML-219ENST00000569161 NUP160Q12769 1436 aa29.67■■■□□ 2.34
PML-219ENST00000569161 CARMIL1Q5VZK9 1371 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms