RNA–Protein interactions for RNA: ENST00000569145.5

IRF8-209, Transcript of interferon regulatory factor 8, humanhuman

TSL 3

Gene IRF8, Length 289 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-209ENST00000569145 NISCHQ9Y2I1 1504 aa28.68■■■□□ 2.18
IRF8-209ENST00000569145 CCDC180Q9P1Z9 1646 aa25.18■■□□□ 1.62
IRF8-209ENST00000569145 ABCC9O60706 1549 aa24.06■■□□□ 1.44
IRF8-209ENST00000569145 ZCCHC6Q5VYS8 1495 aaKnown RBP24.02■■□□□ 1.44
IRF8-209ENST00000569145 DCAF1Q9Y4B6 1507 aa23.75■■□□□ 1.39
IRF8-209ENST00000569145 DCAF8L2P0C7V8 631 aa23.65■■□□□ 1.38
IRF8-209ENST00000569145 MYO15BQ96JP2 1530 aa23.62■■□□□ 1.37
IRF8-209ENST00000569145 NACADO15069 1562 aa23.54■■□□□ 1.36
IRF8-209ENST00000569145 RB1CC1Q8TDY2 1594 aa23.39■■□□□ 1.33
IRF8-209ENST00000569145 SCRIBQ14160 1630 aa23.03■■□□□ 1.28
IRF8-209ENST00000569145 SHROOM4Q9ULL8 1493 aa23.01■■□□□ 1.27
IRF8-209ENST00000569145 UNC13AQ9UPW8 1703 aa22.92■■□□□ 1.26
IRF8-209ENST00000569145 BICRAQ9NZM4 1560 aa22.74■■□□□ 1.23
IRF8-209ENST00000569145 PABPN1Q86U42 306 aaKnown RBP eCLIP22.61■■□□□ 1.21
IRF8-209ENST00000569145 CECR2Q9BXF3 1484 aa22.3■■□□□ 1.16
IRF8-209ENST00000569145 BAZ1AQ9NRL2 1556 aaPredicted RBP22.14■■□□□ 1.13
IRF8-209ENST00000569145 MROH2BQ7Z745 1585 aa22.12■■□□□ 1.13
IRF8-209ENST00000569145 SMARCA4P51532 1647 aa22.11■■□□□ 1.13
IRF8-209ENST00000569145 RSF1Q96T23 1441 aaPredicted RBP22.1■■□□□ 1.13
IRF8-209ENST00000569145 EIF4G1Q04637 1599 aaKnown RBP22.04■■□□□ 1.12
IRF8-209ENST00000569145 SUPT5HO00267 1087 aaKnown RBP21.96■■□□□ 1.11
IRF8-209ENST00000569145 WIZO95785 1651 aa21.91■■□□□ 1.1
IRF8-209ENST00000569145 PEG3Q9GZU2 1588 aa21.9■■□□□ 1.1
IRF8-209ENST00000569145 ATAD2BQ9ULI0 1458 aa21.85■■□□□ 1.09
IRF8-209ENST00000569145 SMARCA2P51531 1590 aa21.81■■□□□ 1.08
IRF8-209ENST00000569145 CC2D2AQ9P2K1 1620 aa21.8■■□□□ 1.08
IRF8-209ENST00000569145 NCAPD3P42695 1498 aa21.75■■□□□ 1.07
IRF8-209ENST00000569145 DNAJC5BQ9UF47 199 aa21.73■■□□□ 1.07
IRF8-209ENST00000569145 TOP2AP11388 1531 aaKnown RBP21.69■■□□□ 1.06
IRF8-209ENST00000569145 HMGXB3Q12766 1538 aa21.66■■□□□ 1.06
IRF8-209ENST00000569145 BAZ1BQ9UIG0 1483 aaKnown RBP21.65■■□□□ 1.06
IRF8-209ENST00000569145 CCDC88BA6NC98 1476 aa21.46■■□□□ 1.03
IRF8-209ENST00000569145 CFTRP13569 1480 aa21.14■□□□□ 0.98
IRF8-209ENST00000569145 CADPSQ9ULU8 1353 aa21.13■□□□□ 0.97
IRF8-209ENST00000569145 NESP48681 1621 aa21.04■□□□□ 0.96
IRF8-209ENST00000569145 LAMC3Q9Y6N6 1575 aa21.02■□□□□ 0.96
IRF8-209ENST00000569145 PRDM2Q13029 1718 aa21■□□□□ 0.95
IRF8-209ENST00000569145 CHIC1Q5VXU3 224 aa20.92■□□□□ 0.94
IRF8-209ENST00000569145 FANCD2Q9BXW9 1451 aa20.87■□□□□ 0.93
IRF8-209ENST00000569145 PDS5BQ9NTI5 1447 aa20.86■□□□□ 0.93
IRF8-209ENST00000569145 ABCC8Q09428 1581 aa20.85■□□□□ 0.93
IRF8-209ENST00000569145 KIF21AQ7Z4S6 1674 aa20.78■□□□□ 0.92
IRF8-209ENST00000569145 WRNQ14191 1432 aaPredicted RBP eCLIP20.78■□□□□ 0.92
IRF8-209ENST00000569145 CEP164Q9UPV0 1460 aa20.76■□□□□ 0.91
IRF8-209ENST00000569145 SYNJ1O43426 1573 aa20.72■□□□□ 0.91
IRF8-209ENST00000569145 CUX1P39880 1505 aa20.72■□□□□ 0.91
IRF8-209ENST00000569145 TRIM41Q8WV44 630 aa20.7■□□□□ 0.9
IRF8-209ENST00000569145 TOP2BQ02880 1626 aa20.67■□□□□ 0.9
IRF8-209ENST00000569145 BIVM-ERCC5R4GMW8 1640 aa20.67■□□□□ 0.9
IRF8-209ENST00000569145 URB2Q14146 1524 aaKnown RBP20.65■□□□□ 0.9
IRF8-209ENST00000569145 DNMBPQ6XZF7 1577 aa20.63■□□□□ 0.89
IRF8-209ENST00000569145 ERCC6Q03468 1493 aa20.63■□□□□ 0.89
IRF8-209ENST00000569145 TOPBP1Q92547 1522 aa20.63■□□□□ 0.89
IRF8-209ENST00000569145 MRC2Q9UBG0 1479 aa20.62■□□□□ 0.89
IRF8-209ENST00000569145 THOC2Q8NI27 1593 aaKnown RBP20.57■□□□□ 0.88
IRF8-209ENST00000569145 WDR62O43379 1518 aa20.55■□□□□ 0.88
IRF8-209ENST00000569145 FGD5Q6ZNL6 1462 aa20.52■□□□□ 0.88
IRF8-209ENST00000569145 DNAJC5Q9H3Z4 198 aa20.51■□□□□ 0.87
IRF8-209ENST00000569145 POLA1P09884 1462 aaPredicted RBP20.5■□□□□ 0.87
IRF8-209ENST00000569145 SOGA1O94964 1423 aa20.41■□□□□ 0.86
IRF8-209ENST00000569145 CUX2O14529 1486 aa20.41■□□□□ 0.86
IRF8-209ENST00000569145 RAD54L2Q9Y4B4 1467 aa20.41■□□□□ 0.86
IRF8-209ENST00000569145 RUSC2Q8N2Y8 1516 aa20.37■□□□□ 0.85
IRF8-209ENST00000569145 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
IRF8-209ENST00000569145 TARBP1Q13395 1621 aaKnown RBP20.36■□□□□ 0.85
IRF8-209ENST00000569145 WDR97A6NE52 1622 aa20.34■□□□□ 0.85
IRF8-209ENST00000569145 IFT140Q96RY7 1462 aa20.31■□□□□ 0.84
IRF8-209ENST00000569145 EEA1Q15075 1411 aa20.3■□□□□ 0.84
IRF8-209ENST00000569145 KIF27Q86VH2 1401 aa20.28■□□□□ 0.84
IRF8-209ENST00000569145 FAM9AQ8IZU1 332 aaPredicted RBP20.27■□□□□ 0.84
IRF8-209ENST00000569145 ABCA5Q8WWZ7 1642 aa20.23■□□□□ 0.83
IRF8-209ENST00000569145 TDRD9Q8NDG6 1382 aaKnown RBP20.22■□□□□ 0.83
IRF8-209ENST00000569145 CSRNP3Q8WYN3 585 aa20.21■□□□□ 0.83
IRF8-209ENST00000569145 ZNF608Q9ULD9 1512 aaPredicted RBP20.21■□□□□ 0.83
IRF8-209ENST00000569145 IGF1RP08069 1367 aa20.19■□□□□ 0.82
IRF8-209ENST00000569145 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.82
IRF8-209ENST00000569145 GAPVD1Q14C86 1478 aa20.18■□□□□ 0.82
IRF8-209ENST00000569145 EIF4G3O43432 1585 aaKnown RBP20.12■□□□□ 0.81
IRF8-209ENST00000569145 ERICH3Q5RHP9 1530 aa20.11■□□□□ 0.81
IRF8-209ENST00000569145 PRXQ9BXM0 1461 aa20.1■□□□□ 0.81
IRF8-209ENST00000569145 PBRM1Q86U86 1689 aa20.08■□□□□ 0.81
IRF8-209ENST00000569145 GRIN2BQ13224 1484 aa20.08■□□□□ 0.81
IRF8-209ENST00000569145 KIF21BO75037 1637 aa20.06■□□□□ 0.8
IRF8-209ENST00000569145 LOC105371045A0A1W2PR82 267 aa20.06■□□□□ 0.8
IRF8-209ENST00000569145 CARMIL1Q5VZK9 1371 aa20.05■□□□□ 0.8
IRF8-209ENST00000569145 CUL7Q14999 1698 aa20.03■□□□□ 0.8
IRF8-209ENST00000569145 RAPGEF2Q9Y4G8 1499 aa20■□□□□ 0.79
IRF8-209ENST00000569145 GOLGA3Q08378 1498 aa19.99■□□□□ 0.79
IRF8-209ENST00000569145 SNAPC4Q5SXM2 1469 aa19.98■□□□□ 0.79
IRF8-209ENST00000569145 ADAMTS12P58397 1594 aa19.97■□□□□ 0.79
IRF8-209ENST00000569145 FHAD1B1AJZ9 1412 aa19.96■□□□□ 0.79
IRF8-209ENST00000569145 MAGI1Q96QZ7 1491 aaPredicted RBP19.96■□□□□ 0.79
IRF8-209ENST00000569145 EHMT2Q96KQ7 1210 aa19.94■□□□□ 0.78
IRF8-209ENST00000569145 SYNJ2O15056 1496 aa19.88■□□□□ 0.77
IRF8-209ENST00000569145 TNIKQ9UKE5 1360 aa19.88■□□□□ 0.77
IRF8-209ENST00000569145 UBTFP17480 764 aaKnown RBP19.86■□□□□ 0.77
IRF8-209ENST00000569145 GRIN2AQ12879 1464 aa19.83■□□□□ 0.76
IRF8-209ENST00000569145 CHMP7Q8WUX9 453 aaPredicted RBP19.8■□□□□ 0.76
IRF8-209ENST00000569145 CHD1O14646 1710 aa19.75■□□□□ 0.75
IRF8-209ENST00000569145 NUP160Q12769 1436 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms