RNA–Protein interactions for RNA: ENST00000569005.5

EIF3C-213, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

TSL 5

Gene EIF3C, Length 610 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-213ENST00000569005 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
EIF3C-213ENST00000569005 ABCC9O60706 1549 aa24.12■■□□□ 1.45
EIF3C-213ENST00000569005 CCDC180Q9P1Z9 1646 aa24.12■■□□□ 1.45
EIF3C-213ENST00000569005 DNAJC5BQ9UF47 199 aa22.91■■□□□ 1.26
EIF3C-213ENST00000569005 RB1CC1Q8TDY2 1594 aa22.91■■□□□ 1.26
EIF3C-213ENST00000569005 NACADO15069 1562 aa22.78■■□□□ 1.24
EIF3C-213ENST00000569005 DCAF8L2P0C7V8 631 aa22.68■■□□□ 1.22
EIF3C-213ENST00000569005 PABPN1Q86U42 306 aaKnown RBP eCLIP22.54■■□□□ 1.2
EIF3C-213ENST00000569005 MYO15BQ96JP2 1530 aa22.52■■□□□ 1.19
EIF3C-213ENST00000569005 UNC13AQ9UPW8 1703 aa22.45■■□□□ 1.18
EIF3C-213ENST00000569005 BICRAQ9NZM4 1560 aa22.33■■□□□ 1.16
EIF3C-213ENST00000569005 ZCCHC6Q5VYS8 1495 aaKnown RBP22.32■■□□□ 1.16
EIF3C-213ENST00000569005 DCAF1Q9Y4B6 1507 aa22.25■■□□□ 1.15
EIF3C-213ENST00000569005 SHROOM4Q9ULL8 1493 aa21.99■■□□□ 1.11
EIF3C-213ENST00000569005 SCRIBQ14160 1630 aa21.95■■□□□ 1.1
EIF3C-213ENST00000569005 CC2D2AQ9P2K1 1620 aa21.75■■□□□ 1.07
EIF3C-213ENST00000569005 EIF4G1Q04637 1599 aaKnown RBP21.73■■□□□ 1.07
EIF3C-213ENST00000569005 CECR2Q9BXF3 1484 aa21.69■■□□□ 1.06
EIF3C-213ENST00000569005 NCAPD3P42695 1498 aa21.06■□□□□ 0.96
EIF3C-213ENST00000569005 DNAJC5Q9H3Z4 198 aa21.03■□□□□ 0.96
EIF3C-213ENST00000569005 ATAD2BQ9ULI0 1458 aa20.99■□□□□ 0.95
EIF3C-213ENST00000569005 SMARCA4P51532 1647 aa20.97■□□□□ 0.95
EIF3C-213ENST00000569005 HMGXB3Q12766 1538 aa20.9■□□□□ 0.94
EIF3C-213ENST00000569005 SMARCA2P51531 1590 aa20.89■□□□□ 0.94
EIF3C-213ENST00000569005 BAZ1AQ9NRL2 1556 aaPredicted RBP20.86■□□□□ 0.93
EIF3C-213ENST00000569005 PEG3Q9GZU2 1588 aa20.81■□□□□ 0.92
EIF3C-213ENST00000569005 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
EIF3C-213ENST00000569005 BAZ1BQ9UIG0 1483 aaKnown RBP20.75■□□□□ 0.91
EIF3C-213ENST00000569005 MROH2BQ7Z745 1585 aa20.74■□□□□ 0.91
EIF3C-213ENST00000569005 CUX2O14529 1486 aa20.72■□□□□ 0.91
EIF3C-213ENST00000569005 NESP48681 1621 aa20.71■□□□□ 0.91
EIF3C-213ENST00000569005 LAMC3Q9Y6N6 1575 aa20.55■□□□□ 0.88
EIF3C-213ENST00000569005 THOC2Q8NI27 1593 aaKnown RBP20.51■□□□□ 0.87
EIF3C-213ENST00000569005 WIZO95785 1651 aa20.48■□□□□ 0.87
EIF3C-213ENST00000569005 KIF21AQ7Z4S6 1674 aa20.43■□□□□ 0.86
EIF3C-213ENST00000569005 PDS5BQ9NTI5 1447 aa20.39■□□□□ 0.85
EIF3C-213ENST00000569005 CADPSQ9ULU8 1353 aa20.39■□□□□ 0.85
EIF3C-213ENST00000569005 RSF1Q96T23 1441 aaPredicted RBP20.32■□□□□ 0.84
EIF3C-213ENST00000569005 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
EIF3C-213ENST00000569005 WDR62O43379 1518 aa20.22■□□□□ 0.83
EIF3C-213ENST00000569005 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
EIF3C-213ENST00000569005 CFTRP13569 1480 aa20.18■□□□□ 0.82
EIF3C-213ENST00000569005 FANCD2Q9BXW9 1451 aa20.16■□□□□ 0.82
EIF3C-213ENST00000569005 CEP164Q9UPV0 1460 aa20.16■□□□□ 0.82
EIF3C-213ENST00000569005 TRIM41Q8WV44 630 aa20.12■□□□□ 0.81
EIF3C-213ENST00000569005 URB2Q14146 1524 aaKnown RBP20.02■□□□□ 0.8
EIF3C-213ENST00000569005 CCDC88BA6NC98 1476 aa19.99■□□□□ 0.79
EIF3C-213ENST00000569005 PRDM2Q13029 1718 aa19.97■□□□□ 0.79
EIF3C-213ENST00000569005 OSCARQ8IYS5 282 aa19.87■□□□□ 0.77
EIF3C-213ENST00000569005 TOPBP1Q92547 1522 aa19.79■□□□□ 0.76
EIF3C-213ENST00000569005 ZNF608Q9ULD9 1512 aaPredicted RBP19.76■□□□□ 0.75
EIF3C-213ENST00000569005 IFT140Q96RY7 1462 aa19.76■□□□□ 0.75
EIF3C-213ENST00000569005 DNMBPQ6XZF7 1577 aa19.71■□□□□ 0.75
EIF3C-213ENST00000569005 ABCC8Q09428 1581 aa19.7■□□□□ 0.74
EIF3C-213ENST00000569005 EIF4G3O43432 1585 aaKnown RBP19.65■□□□□ 0.74
EIF3C-213ENST00000569005 TARBP1Q13395 1621 aaKnown RBP19.65■□□□□ 0.74
EIF3C-213ENST00000569005 POLA1P09884 1462 aaPredicted RBP19.6■□□□□ 0.73
EIF3C-213ENST00000569005 AQRO60306 1485 aaKnown RBP eCLIP19.56■□□□□ 0.72
EIF3C-213ENST00000569005 RIMBP3CA6NJZ7 1639 aa19.54■□□□□ 0.72
EIF3C-213ENST00000569005 RIMBP3BA6NNM3 1639 aa19.54■□□□□ 0.72
EIF3C-213ENST00000569005 RIMBP3Q9UFD9 1639 aa19.54■□□□□ 0.72
EIF3C-213ENST00000569005 RAD54L2Q9Y4B4 1467 aa19.52■□□□□ 0.72
EIF3C-213ENST00000569005 CYB5RLQ6IPT4 315 aa19.49■□□□□ 0.71
EIF3C-213ENST00000569005 ARHGEF11O15085 1522 aa19.48■□□□□ 0.71
EIF3C-213ENST00000569005 CUX1P39880 1505 aa19.48■□□□□ 0.71
EIF3C-213ENST00000569005 CHD1O14646 1710 aa19.48■□□□□ 0.71
EIF3C-213ENST00000569005 FBLN2P98095 1184 aa19.47■□□□□ 0.71
EIF3C-213ENST00000569005 FGD5Q6ZNL6 1462 aa19.47■□□□□ 0.71
EIF3C-213ENST00000569005 SOGA1O94964 1423 aa19.46■□□□□ 0.71
EIF3C-213ENST00000569005 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
EIF3C-213ENST00000569005 WDR97A6NE52 1622 aa19.41■□□□□ 0.7
EIF3C-213ENST00000569005 SNAPC4Q5SXM2 1469 aa19.36■□□□□ 0.69
EIF3C-213ENST00000569005 SUPT5HO00267 1087 aaKnown RBP19.33■□□□□ 0.68
EIF3C-213ENST00000569005 ARAP1Q96P48 1450 aa19.31■□□□□ 0.68
EIF3C-213ENST00000569005 MAGI1Q96QZ7 1491 aaPredicted RBP19.31■□□□□ 0.68
EIF3C-213ENST00000569005 GRIN2BQ13224 1484 aa19.3■□□□□ 0.68
EIF3C-213ENST00000569005 TRHP20396 242 aaPredicted RBP19.3■□□□□ 0.68
EIF3C-213ENST00000569005 CLASP1Q7Z460 1538 aa19.3■□□□□ 0.68
EIF3C-213ENST00000569005 ABCA10Q8WWZ4 1543 aa19.26■□□□□ 0.67
EIF3C-213ENST00000569005 SYNJ2O15056 1496 aa19.25■□□□□ 0.67
EIF3C-213ENST00000569005 CHMP7Q8WUX9 453 aaPredicted RBP19.25■□□□□ 0.67
EIF3C-213ENST00000569005 ABCA5Q8WWZ7 1642 aa19.25■□□□□ 0.67
EIF3C-213ENST00000569005 PBRM1Q86U86 1689 aa19.24■□□□□ 0.67
EIF3C-213ENST00000569005 GAPVD1Q14C86 1478 aa19.24■□□□□ 0.67
EIF3C-213ENST00000569005 SYNJ1O43426 1573 aa19.22■□□□□ 0.67
EIF3C-213ENST00000569005 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
EIF3C-213ENST00000569005 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
EIF3C-213ENST00000569005 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
EIF3C-213ENST00000569005 ADAMTS12P58397 1594 aa19.09■□□□□ 0.65
EIF3C-213ENST00000569005 GRIN2AQ12879 1464 aa19.08■□□□□ 0.64
EIF3C-213ENST00000569005 CEP170Q5SW79 1584 aa19.03■□□□□ 0.64
EIF3C-213ENST00000569005 NUP160Q12769 1436 aa19.03■□□□□ 0.64
EIF3C-213ENST00000569005 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
EIF3C-213ENST00000569005 ERICH3Q5RHP9 1530 aa19■□□□□ 0.63
EIF3C-213ENST00000569005 ERCC6L2Q5T890 1561 aa19■□□□□ 0.63
EIF3C-213ENST00000569005 SHROOM2Q13796 1616 aa18.96■□□□□ 0.63
EIF3C-213ENST00000569005 RUSC2Q8N2Y8 1516 aa18.82■□□□□ 0.6
EIF3C-213ENST00000569005 PRG4Q92954 1404 aaPredicted RBP18.81■□□□□ 0.6
EIF3C-213ENST00000569005 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
EIF3C-213ENST00000569005 IGF1RP08069 1367 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms