RNA–Protein interactions for RNA: ENST00000568936.1

CCNDBP1-214, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,088 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-214ENST00000568936 NISCHQ9Y2I1 1504 aa26.6■■□□□ 1.85
CCNDBP1-214ENST00000568936 CCDC180Q9P1Z9 1646 aa23.19■■□□□ 1.3
CCNDBP1-214ENST00000568936 ZCCHC6Q5VYS8 1495 aaKnown RBP22.33■■□□□ 1.17
CCNDBP1-214ENST00000568936 ABCC9O60706 1549 aa22.05■■□□□ 1.12
CCNDBP1-214ENST00000568936 DCAF8L2P0C7V8 631 aa21.99■■□□□ 1.11
CCNDBP1-214ENST00000568936 DCAF1Q9Y4B6 1507 aa21.94■■□□□ 1.1
CCNDBP1-214ENST00000568936 SHROOM4Q9ULL8 1493 aa21.72■■□□□ 1.07
CCNDBP1-214ENST00000568936 MYO15BQ96JP2 1530 aa21.68■■□□□ 1.06
CCNDBP1-214ENST00000568936 NACADO15069 1562 aa21.59■■□□□ 1.05
CCNDBP1-214ENST00000568936 RB1CC1Q8TDY2 1594 aa21.42■■□□□ 1.02
CCNDBP1-214ENST00000568936 SCRIBQ14160 1630 aa21.39■■□□□ 1.01
CCNDBP1-214ENST00000568936 UNC13AQ9UPW8 1703 aa21.14■□□□□ 0.97
CCNDBP1-214ENST00000568936 BICRAQ9NZM4 1560 aa20.9■□□□□ 0.94
CCNDBP1-214ENST00000568936 SUPT5HO00267 1087 aaKnown RBP20.82■□□□□ 0.92
CCNDBP1-214ENST00000568936 PABPN1Q86U42 306 aaKnown RBP eCLIP20.79■□□□□ 0.92
CCNDBP1-214ENST00000568936 CECR2Q9BXF3 1484 aa20.74■□□□□ 0.91
CCNDBP1-214ENST00000568936 RSF1Q96T23 1441 aaPredicted RBP20.63■□□□□ 0.89
CCNDBP1-214ENST00000568936 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
CCNDBP1-214ENST00000568936 BAZ1AQ9NRL2 1556 aaPredicted RBP20.5■□□□□ 0.87
CCNDBP1-214ENST00000568936 SMARCA4P51532 1647 aa20.48■□□□□ 0.87
CCNDBP1-214ENST00000568936 WIZO95785 1651 aa20.44■□□□□ 0.86
CCNDBP1-214ENST00000568936 EIF4G1Q04637 1599 aaKnown RBP20.22■□□□□ 0.83
CCNDBP1-214ENST00000568936 PEG3Q9GZU2 1588 aa20.2■□□□□ 0.82
CCNDBP1-214ENST00000568936 TOP2AP11388 1531 aaKnown RBP20.15■□□□□ 0.82
CCNDBP1-214ENST00000568936 ATAD2BQ9ULI0 1458 aa20.14■□□□□ 0.81
CCNDBP1-214ENST00000568936 SMARCA2P51531 1590 aa20.07■□□□□ 0.8
CCNDBP1-214ENST00000568936 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
CCNDBP1-214ENST00000568936 CCDC88BA6NC98 1476 aa19.98■□□□□ 0.79
CCNDBP1-214ENST00000568936 CC2D2AQ9P2K1 1620 aa19.95■□□□□ 0.78
CCNDBP1-214ENST00000568936 NCAPD3P42695 1498 aa19.95■□□□□ 0.78
CCNDBP1-214ENST00000568936 CHIC1Q5VXU3 224 aa19.91■□□□□ 0.78
CCNDBP1-214ENST00000568936 HMGXB3Q12766 1538 aa19.91■□□□□ 0.78
CCNDBP1-214ENST00000568936 DNAJC5BQ9UF47 199 aa19.6■□□□□ 0.73
CCNDBP1-214ENST00000568936 ABCC8Q09428 1581 aa19.59■□□□□ 0.73
CCNDBP1-214ENST00000568936 TRIM41Q8WV44 630 aa19.53■□□□□ 0.72
CCNDBP1-214ENST00000568936 CFTRP13569 1480 aa19.5■□□□□ 0.71
CCNDBP1-214ENST00000568936 CADPSQ9ULU8 1353 aa19.43■□□□□ 0.7
CCNDBP1-214ENST00000568936 PRDM2Q13029 1718 aa19.42■□□□□ 0.7
CCNDBP1-214ENST00000568936 NESP48681 1621 aa19.38■□□□□ 0.69
CCNDBP1-214ENST00000568936 WRNQ14191 1432 aaPredicted RBP eCLIP19.38■□□□□ 0.69
CCNDBP1-214ENST00000568936 SYNJ1O43426 1573 aa19.37■□□□□ 0.69
CCNDBP1-214ENST00000568936 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.68
CCNDBP1-214ENST00000568936 TOP2BQ02880 1626 aa19.25■□□□□ 0.67
CCNDBP1-214ENST00000568936 CUX1P39880 1505 aa19.25■□□□□ 0.67
CCNDBP1-214ENST00000568936 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
CCNDBP1-214ENST00000568936 FAM9AQ8IZU1 332 aaPredicted RBP19.24■□□□□ 0.67
CCNDBP1-214ENST00000568936 FANCD2Q9BXW9 1451 aa19.23■□□□□ 0.67
CCNDBP1-214ENST00000568936 LOC105371045A0A1W2PR82 267 aa19.2■□□□□ 0.66
CCNDBP1-214ENST00000568936 SOGA1O94964 1423 aa19.19■□□□□ 0.66
CCNDBP1-214ENST00000568936 RUSC2Q8N2Y8 1516 aa19.17■□□□□ 0.66
CCNDBP1-214ENST00000568936 KIF21AQ7Z4S6 1674 aa19.14■□□□□ 0.65
CCNDBP1-214ENST00000568936 CEP164Q9UPV0 1460 aa19.09■□□□□ 0.65
CCNDBP1-214ENST00000568936 PDS5BQ9NTI5 1447 aa19.09■□□□□ 0.65
CCNDBP1-214ENST00000568936 DNMBPQ6XZF7 1577 aa19.05■□□□□ 0.64
CCNDBP1-214ENST00000568936 URB2Q14146 1524 aaKnown RBP19.04■□□□□ 0.64
CCNDBP1-214ENST00000568936 TOPBP1Q92547 1522 aa19.03■□□□□ 0.64
CCNDBP1-214ENST00000568936 FGD5Q6ZNL6 1462 aa19.03■□□□□ 0.64
CCNDBP1-214ENST00000568936 EHMT2Q96KQ7 1210 aa19.02■□□□□ 0.63
CCNDBP1-214ENST00000568936 EEA1Q15075 1411 aa18.99■□□□□ 0.63
CCNDBP1-214ENST00000568936 CSRNP3Q8WYN3 585 aa18.96■□□□□ 0.63
CCNDBP1-214ENST00000568936 POLA1P09884 1462 aaPredicted RBP18.94■□□□□ 0.62
CCNDBP1-214ENST00000568936 RAD54L2Q9Y4B4 1467 aa18.91■□□□□ 0.62
CCNDBP1-214ENST00000568936 MRC2Q9UBG0 1479 aa18.89■□□□□ 0.61
CCNDBP1-214ENST00000568936 CUX2O14529 1486 aa18.87■□□□□ 0.61
CCNDBP1-214ENST00000568936 KIF27Q86VH2 1401 aa18.86■□□□□ 0.61
CCNDBP1-214ENST00000568936 WDR97A6NE52 1622 aa18.83■□□□□ 0.61
CCNDBP1-214ENST00000568936 KIF21BO75037 1637 aa18.83■□□□□ 0.61
CCNDBP1-214ENST00000568936 ERCC6Q03468 1493 aa18.83■□□□□ 0.6
CCNDBP1-214ENST00000568936 ABCA10Q8WWZ4 1543 aa18.83■□□□□ 0.6
CCNDBP1-214ENST00000568936 WDR62O43379 1518 aa18.81■□□□□ 0.6
CCNDBP1-214ENST00000568936 THOC2Q8NI27 1593 aaKnown RBP18.81■□□□□ 0.6
CCNDBP1-214ENST00000568936 TARBP1Q13395 1621 aaKnown RBP18.79■□□□□ 0.6
CCNDBP1-214ENST00000568936 RAPGEF2Q9Y4G8 1499 aa18.78■□□□□ 0.6
CCNDBP1-214ENST00000568936 GOLGA3Q08378 1498 aa18.78■□□□□ 0.6
CCNDBP1-214ENST00000568936 PRXQ9BXM0 1461 aa18.77■□□□□ 0.6
CCNDBP1-214ENST00000568936 IGF1RP08069 1367 aa18.76■□□□□ 0.59
CCNDBP1-214ENST00000568936 TNIKQ9UKE5 1360 aa18.72■□□□□ 0.59
CCNDBP1-214ENST00000568936 ABCA5Q8WWZ7 1642 aa18.72■□□□□ 0.59
CCNDBP1-214ENST00000568936 TDRD9Q8NDG6 1382 aaKnown RBP18.71■□□□□ 0.59
CCNDBP1-214ENST00000568936 UBTFP17480 764 aaKnown RBP18.7■□□□□ 0.58
CCNDBP1-214ENST00000568936 ERICH3Q5RHP9 1530 aa18.69■□□□□ 0.58
CCNDBP1-214ENST00000568936 GAPVD1Q14C86 1478 aa18.64■□□□□ 0.58
CCNDBP1-214ENST00000568936 CEP162Q5TB80 1403 aa18.64■□□□□ 0.57
CCNDBP1-214ENST00000568936 CARMIL1Q5VZK9 1371 aa18.64■□□□□ 0.57
CCNDBP1-214ENST00000568936 ZNF608Q9ULD9 1512 aaPredicted RBP18.63■□□□□ 0.57
CCNDBP1-214ENST00000568936 IFT140Q96RY7 1462 aa18.63■□□□□ 0.57
CCNDBP1-214ENST00000568936 AQRO60306 1485 aaKnown RBP eCLIP18.62■□□□□ 0.571e-6■■□□□ 13.6
CCNDBP1-214ENST00000568936 PBRM1Q86U86 1689 aa18.59■□□□□ 0.57
CCNDBP1-214ENST00000568936 CUL7Q14999 1698 aa18.58■□□□□ 0.57
CCNDBP1-214ENST00000568936 EIF4G3O43432 1585 aaKnown RBP18.53■□□□□ 0.56
CCNDBP1-214ENST00000568936 RANGAP1P46060 587 aaPredicted RBP18.5■□□□□ 0.55
CCNDBP1-214ENST00000568936 CLIP1P30622 1438 aa18.49■□□□□ 0.55
CCNDBP1-214ENST00000568936 GRIN2BQ13224 1484 aa18.48■□□□□ 0.55
CCNDBP1-214ENST00000568936 ADAMTS12P58397 1594 aa18.46■□□□□ 0.55
CCNDBP1-214ENST00000568936 FHAD1B1AJZ9 1412 aa18.42■□□□□ 0.54
CCNDBP1-214ENST00000568936 SNAPC4Q5SXM2 1469 aa18.41■□□□□ 0.54
CCNDBP1-214ENST00000568936 CTTNBP2Q8WZ74 1663 aa18.41■□□□□ 0.54
CCNDBP1-214ENST00000568936 ARAP1Q96P48 1450 aa18.38■□□□□ 0.53
CCNDBP1-214ENST00000568936 ARHGAP35Q9NRY4 1499 aa18.38■□□□□ 0.53
CCNDBP1-214ENST00000568936 MAGI1Q96QZ7 1491 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms