RNA–Protein interactions for RNA: ENST00000568923.5

SCNN1B-208, Transcript of sodium channel epithelial 1 beta subunit, humanhuman

TSL 3 BASIC

Gene SCNN1B, Length 1,852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1B-208ENST00000568923 NISCHQ9Y2I1 1504 aa23.15■■□□□ 1.3
SCNN1B-208ENST00000568923 CCDC180Q9P1Z9 1646 aa20.49■□□□□ 0.87
SCNN1B-208ENST00000568923 ABCC9O60706 1549 aa20.22■□□□□ 0.83
SCNN1B-208ENST00000568923 DCAF8L2P0C7V8 631 aa19.37■□□□□ 0.69
SCNN1B-208ENST00000568923 ZCCHC6Q5VYS8 1495 aaKnown RBP19.3■□□□□ 0.68
SCNN1B-208ENST00000568923 RB1CC1Q8TDY2 1594 aa19.29■□□□□ 0.68
SCNN1B-208ENST00000568923 NACADO15069 1562 aa19.26■□□□□ 0.67
SCNN1B-208ENST00000568923 MYO15BQ96JP2 1530 aa19.1■□□□□ 0.65
SCNN1B-208ENST00000568923 DCAF1Q9Y4B6 1507 aa19.06■□□□□ 0.64
SCNN1B-208ENST00000568923 UNC13AQ9UPW8 1703 aa19■□□□□ 0.63
SCNN1B-208ENST00000568923 PABPN1Q86U42 306 aaKnown RBP eCLIP18.94■□□□□ 0.62
SCNN1B-208ENST00000568923 BICRAQ9NZM4 1560 aa18.88■□□□□ 0.61
SCNN1B-208ENST00000568923 SCRIBQ14160 1630 aa18.86■□□□□ 0.61
SCNN1B-208ENST00000568923 DNAJC5BQ9UF47 199 aa18.68■□□□□ 0.58
SCNN1B-208ENST00000568923 SHROOM4Q9ULL8 1493 aa18.43■□□□□ 0.54
SCNN1B-208ENST00000568923 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
SCNN1B-208ENST00000568923 CC2D2AQ9P2K1 1620 aa18.25■□□□□ 0.51
SCNN1B-208ENST00000568923 CECR2Q9BXF3 1484 aa18.16■□□□□ 0.5
SCNN1B-208ENST00000568923 SMARCA4P51532 1647 aa17.97■□□□□ 0.47
SCNN1B-208ENST00000568923 MROH2BQ7Z745 1585 aa17.93■□□□□ 0.46
SCNN1B-208ENST00000568923 ATAD2BQ9ULI0 1458 aa17.88■□□□□ 0.45
SCNN1B-208ENST00000568923 BAZ1AQ9NRL2 1556 aaPredicted RBP17.88■□□□□ 0.45
SCNN1B-208ENST00000568923 NCAPD3P42695 1498 aa17.82■□□□□ 0.44
SCNN1B-208ENST00000568923 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
SCNN1B-208ENST00000568923 PEG3Q9GZU2 1588 aa17.74■□□□□ 0.43
SCNN1B-208ENST00000568923 WIZO95785 1651 aa17.73■□□□□ 0.43
SCNN1B-208ENST00000568923 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
SCNN1B-208ENST00000568923 BAZ1BQ9UIG0 1483 aaKnown RBP17.69■□□□□ 0.42
SCNN1B-208ENST00000568923 RSF1Q96T23 1441 aaPredicted RBP17.68■□□□□ 0.42
SCNN1B-208ENST00000568923 NESP48681 1621 aa17.55■□□□□ 0.4
SCNN1B-208ENST00000568923 TOP2AP11388 1531 aaKnown RBP17.45■□□□□ 0.38
SCNN1B-208ENST00000568923 ERCC6Q03468 1493 aa17.32■□□□□ 0.36
SCNN1B-208ENST00000568923 LAMC3Q9Y6N6 1575 aa17.31■□□□□ 0.36
SCNN1B-208ENST00000568923 CADPSQ9ULU8 1353 aa17.31■□□□□ 0.36
SCNN1B-208ENST00000568923 CCDC88BA6NC98 1476 aa17.3■□□□□ 0.36
SCNN1B-208ENST00000568923 KIF21AQ7Z4S6 1674 aa17.28■□□□□ 0.36
SCNN1B-208ENST00000568923 SUPT5HO00267 1087 aaKnown RBP17.25■□□□□ 0.35
SCNN1B-208ENST00000568923 CFTRP13569 1480 aa17.22■□□□□ 0.35
SCNN1B-208ENST00000568923 THOC2Q8NI27 1593 aaKnown RBP17.21■□□□□ 0.35
SCNN1B-208ENST00000568923 PDS5BQ9NTI5 1447 aa17.17■□□□□ 0.34
SCNN1B-208ENST00000568923 AEBP2Q6ZN18 517 aaPredicted RBP17.14■□□□□ 0.33
SCNN1B-208ENST00000568923 FANCD2Q9BXW9 1451 aa17.13■□□□□ 0.33
SCNN1B-208ENST00000568923 CUX2O14529 1486 aa17.09■□□□□ 0.33
SCNN1B-208ENST00000568923 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.32
SCNN1B-208ENST00000568923 MRC2Q9UBG0 1479 aa17.07■□□□□ 0.32
SCNN1B-208ENST00000568923 PRDM2Q13029 1718 aa17.03■□□□□ 0.32
SCNN1B-208ENST00000568923 URB2Q14146 1524 aaKnown RBP17.03■□□□□ 0.32
SCNN1B-208ENST00000568923 WDR62O43379 1518 aa17.03■□□□□ 0.32
SCNN1B-208ENST00000568923 TOPBP1Q92547 1522 aa16.88■□□□□ 0.29
SCNN1B-208ENST00000568923 DNMBPQ6XZF7 1577 aa16.82■□□□□ 0.28
SCNN1B-208ENST00000568923 CUX1P39880 1505 aa16.8■□□□□ 0.28
SCNN1B-208ENST00000568923 ZNF608Q9ULD9 1512 aaPredicted RBP16.78■□□□□ 0.28
SCNN1B-208ENST00000568923 POLA1P09884 1462 aaPredicted RBP16.75■□□□□ 0.27
SCNN1B-208ENST00000568923 RAD54L2Q9Y4B4 1467 aa16.74■□□□□ 0.27
SCNN1B-208ENST00000568923 ABCC8Q09428 1581 aa16.74■□□□□ 0.27
SCNN1B-208ENST00000568923 FGD5Q6ZNL6 1462 aa16.71■□□□□ 0.27
SCNN1B-208ENST00000568923 TARBP1Q13395 1621 aaKnown RBP16.71■□□□□ 0.27
SCNN1B-208ENST00000568923 IFT140Q96RY7 1462 aa16.7■□□□□ 0.26
SCNN1B-208ENST00000568923 SYNJ1O43426 1573 aa16.67■□□□□ 0.26
SCNN1B-208ENST00000568923 AQRO60306 1485 aaKnown RBP eCLIP16.66■□□□□ 0.26
SCNN1B-208ENST00000568923 EIF4G3O43432 1585 aaKnown RBP16.65■□□□□ 0.26
SCNN1B-208ENST00000568923 DNAJC5Q9H3Z4 198 aa16.65■□□□□ 0.26
SCNN1B-208ENST00000568923 SOGA1O94964 1423 aa16.63■□□□□ 0.25
SCNN1B-208ENST00000568923 WRNQ14191 1432 aaPredicted RBP eCLIP16.62■□□□□ 0.25
SCNN1B-208ENST00000568923 TDRD9Q8NDG6 1382 aaKnown RBP16.61■□□□□ 0.25
SCNN1B-208ENST00000568923 TOP2BQ02880 1626 aa16.58■□□□□ 0.24
SCNN1B-208ENST00000568923 BIVM-ERCC5R4GMW8 1640 aa16.58■□□□□ 0.24
SCNN1B-208ENST00000568923 WDR97A6NE52 1622 aa16.57■□□□□ 0.24
SCNN1B-208ENST00000568923 ABCA10Q8WWZ4 1543 aa16.5■□□□□ 0.23
SCNN1B-208ENST00000568923 SNAPC4Q5SXM2 1469 aa16.47■□□□□ 0.23
SCNN1B-208ENST00000568923 ABCA5Q8WWZ7 1642 aa16.47■□□□□ 0.23
SCNN1B-208ENST00000568923 CHD1O14646 1710 aa16.45■□□□□ 0.22
SCNN1B-208ENST00000568923 GAPVD1Q14C86 1478 aa16.43■□□□□ 0.22
SCNN1B-208ENST00000568923 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
SCNN1B-208ENST00000568923 GRIN2BQ13224 1484 aa16.41■□□□□ 0.22
SCNN1B-208ENST00000568923 FBLN2P98095 1184 aa16.39■□□□□ 0.22
SCNN1B-208ENST00000568923 OSCARQ8IYS5 282 aa16.39■□□□□ 0.22
SCNN1B-208ENST00000568923 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
SCNN1B-208ENST00000568923 ADAMTS12P58397 1594 aa16.32■□□□□ 0.2
SCNN1B-208ENST00000568923 SYNJ2O15056 1496 aa16.31■□□□□ 0.2
SCNN1B-208ENST00000568923 CHMP7Q8WUX9 453 aaPredicted RBP16.29■□□□□ 0.2
SCNN1B-208ENST00000568923 RUSC2Q8N2Y8 1516 aa16.28■□□□□ 0.2
SCNN1B-208ENST00000568923 ERICH3Q5RHP9 1530 aa16.25■□□□□ 0.19
SCNN1B-208ENST00000568923 CLASP1Q7Z460 1538 aa16.25■□□□□ 0.19
SCNN1B-208ENST00000568923 RIMBP3CA6NJZ7 1639 aa16.24■□□□□ 0.19
SCNN1B-208ENST00000568923 RIMBP3BA6NNM3 1639 aa16.24■□□□□ 0.19
SCNN1B-208ENST00000568923 RIMBP3Q9UFD9 1639 aa16.24■□□□□ 0.19
SCNN1B-208ENST00000568923 GRIN2AQ12879 1464 aa16.24■□□□□ 0.19
SCNN1B-208ENST00000568923 IGF1RP08069 1367 aa16.24■□□□□ 0.19
SCNN1B-208ENST00000568923 CEP170Q5SW79 1584 aa16.23■□□□□ 0.19
SCNN1B-208ENST00000568923 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
SCNN1B-208ENST00000568923 ARHGEF11O15085 1522 aa16.22■□□□□ 0.19
SCNN1B-208ENST00000568923 KIF27Q86VH2 1401 aa16.21■□□□□ 0.19
SCNN1B-208ENST00000568923 TRIM41Q8WV44 630 aa16.18■□□□□ 0.18
SCNN1B-208ENST00000568923 NUP160Q12769 1436 aa16.17■□□□□ 0.18
SCNN1B-208ENST00000568923 ERCC6L2Q5T890 1561 aa16.16■□□□□ 0.18
SCNN1B-208ENST00000568923 ARAP1Q96P48 1450 aa16.14■□□□□ 0.17
SCNN1B-208ENST00000568923 CHIC1Q5VXU3 224 aa16.1■□□□□ 0.17
SCNN1B-208ENST00000568923 CARMIL1Q5VZK9 1371 aa16.1■□□□□ 0.17
SCNN1B-208ENST00000568923 CUL7Q14999 1698 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms