RNA–Protein interactions for RNA: ENST00000568919.1

SIN3A-212, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-212ENST00000568919 NISCHQ9Y2I1 1504 aa44.58■■■■■ 4.73
SIN3A-212ENST00000568919 CCDC180Q9P1Z9 1646 aa39.69■■■■□ 3.94
SIN3A-212ENST00000568919 ABCC9O60706 1549 aa39.29■■■■□ 3.88
SIN3A-212ENST00000568919 RB1CC1Q8TDY2 1594 aa37.58■■■■□ 3.61
SIN3A-212ENST00000568919 DCAF8L2P0C7V8 631 aa37.53■■■■□ 3.6
SIN3A-212ENST00000568919 NACADO15069 1562 aa37.46■■■■□ 3.59
SIN3A-212ENST00000568919 MYO15BQ96JP2 1530 aa37.1■■■■□ 3.53
SIN3A-212ENST00000568919 ZCCHC6Q5VYS8 1495 aaKnown RBP37.01■■■■□ 3.52
SIN3A-212ENST00000568919 DCAF1Q9Y4B6 1507 aa36.83■■■■□ 3.49
SIN3A-212ENST00000568919 PABPN1Q86U42 306 aaKnown RBP eCLIP36.73■■■■□ 3.47
SIN3A-212ENST00000568919 UNC13AQ9UPW8 1703 aa36.73■■■■□ 3.47
SIN3A-212ENST00000568919 DNAJC5BQ9UF47 199 aa36.5■■■■□ 3.43
SIN3A-212ENST00000568919 BICRAQ9NZM4 1560 aa36.49■■■■□ 3.43
SIN3A-212ENST00000568919 SCRIBQ14160 1630 aa36.24■■■■□ 3.39
SIN3A-212ENST00000568919 SHROOM4Q9ULL8 1493 aa35.99■■■■□ 3.35
SIN3A-212ENST00000568919 EIF4G1Q04637 1599 aaKnown RBP35.53■■■■□ 3.28
SIN3A-212ENST00000568919 CC2D2AQ9P2K1 1620 aa35.49■■■■□ 3.27
SIN3A-212ENST00000568919 CECR2Q9BXF3 1484 aa35.32■■■■□ 3.24
SIN3A-212ENST00000568919 SMARCA4P51532 1647 aa34.63■■■■□ 3.13
SIN3A-212ENST00000568919 NCAPD3P42695 1498 aa34.61■■■■□ 3.13
SIN3A-212ENST00000568919 ATAD2BQ9ULI0 1458 aa34.58■■■■□ 3.13
SIN3A-212ENST00000568919 BAZ1AQ9NRL2 1556 aaPredicted RBP34.54■■■■□ 3.12
SIN3A-212ENST00000568919 SMARCA2P51531 1590 aa34.47■■■■□ 3.11
SIN3A-212ENST00000568919 MROH2BQ7Z745 1585 aa34.36■■■■□ 3.09
SIN3A-212ENST00000568919 HMGXB3Q12766 1538 aa34.34■■■■□ 3.09
SIN3A-212ENST00000568919 PEG3Q9GZU2 1588 aa34.28■■■■□ 3.08
SIN3A-212ENST00000568919 BAZ1BQ9UIG0 1483 aaKnown RBP34.24■■■■□ 3.07
SIN3A-212ENST00000568919 WIZO95785 1651 aa33.96■■■■□ 3.03
SIN3A-212ENST00000568919 NESP48681 1621 aa33.9■■■■□ 3.02
SIN3A-212ENST00000568919 RSF1Q96T23 1441 aaPredicted RBP33.87■■■■□ 3.01
SIN3A-212ENST00000568919 ERCC6Q03468 1493 aa33.86■■■■□ 3.01
SIN3A-212ENST00000568919 LAMC3Q9Y6N6 1575 aa33.7■■■□□ 2.99
SIN3A-212ENST00000568919 CUX2O14529 1486 aa33.61■■■□□ 2.97
SIN3A-212ENST00000568919 CADPSQ9ULU8 1353 aa33.6■■■□□ 2.97
SIN3A-212ENST00000568919 PDS5BQ9NTI5 1447 aa33.53■■■□□ 2.96
SIN3A-212ENST00000568919 TOP2AP11388 1531 aaKnown RBP33.53■■■□□ 2.96
SIN3A-212ENST00000568919 KIF21AQ7Z4S6 1674 aa33.43■■■□□ 2.94
SIN3A-212ENST00000568919 THOC2Q8NI27 1593 aaKnown RBP33.38■■■□□ 2.93
SIN3A-212ENST00000568919 CFTRP13569 1480 aa33.31■■■□□ 2.92
SIN3A-212ENST00000568919 CCDC88BA6NC98 1476 aa33.22■■■□□ 2.91
SIN3A-212ENST00000568919 FANCD2Q9BXW9 1451 aa33.18■■■□□ 2.9
SIN3A-212ENST00000568919 MRC2Q9UBG0 1479 aa33.18■■■□□ 2.9
SIN3A-212ENST00000568919 CEP164Q9UPV0 1460 aa33.15■■■□□ 2.9
SIN3A-212ENST00000568919 DNAJC5Q9H3Z4 198 aa33.12■■■□□ 2.89
SIN3A-212ENST00000568919 WDR62O43379 1518 aa33.06■■■□□ 2.88
SIN3A-212ENST00000568919 PRDM2Q13029 1718 aa32.93■■■□□ 2.86
SIN3A-212ENST00000568919 URB2Q14146 1524 aaKnown RBP32.88■■■□□ 2.85
SIN3A-212ENST00000568919 SUPT5HO00267 1087 aaKnown RBP32.82■■■□□ 2.84
SIN3A-212ENST00000568919 TOPBP1Q92547 1522 aa32.61■■■□□ 2.81
SIN3A-212ENST00000568919 ABCC8Q09428 1581 aa32.59■■■□□ 2.81
SIN3A-212ENST00000568919 DNMBPQ6XZF7 1577 aa32.51■■■□□ 2.79
SIN3A-212ENST00000568919 IFT140Q96RY7 1462 aa32.49■■■□□ 2.79
SIN3A-212ENST00000568919 ZNF608Q9ULD9 1512 aaPredicted RBP32.41■■■□□ 2.78
SIN3A-212ENST00000568919 POLA1P09884 1462 aaPredicted RBP32.3■■■□□ 2.76
SIN3A-212ENST00000568919 OSCARQ8IYS5 282 aa32.28■■■□□ 2.76
SIN3A-212ENST00000568919 TARBP1Q13395 1621 aaKnown RBP32.27■■■□□ 2.76
SIN3A-212ENST00000568919 CUX1P39880 1505 aa32.24■■■□□ 2.75
SIN3A-212ENST00000568919 SOGA1O94964 1423 aa32.22■■■□□ 2.75
SIN3A-212ENST00000568919 RAD54L2Q9Y4B4 1467 aa32.22■■■□□ 2.75
SIN3A-212ENST00000568919 AQRO60306 1485 aaKnown RBP eCLIP32.21■■■□□ 2.75
SIN3A-212ENST00000568919 FGD5Q6ZNL6 1462 aa32.18■■■□□ 2.74
SIN3A-212ENST00000568919 EIF4G3O43432 1585 aaKnown RBP32.18■■■□□ 2.74
SIN3A-212ENST00000568919 TDRD9Q8NDG6 1382 aaKnown RBP32.1■■■□□ 2.73
SIN3A-212ENST00000568919 WDR97A6NE52 1622 aa31.93■■■□□ 2.7
SIN3A-212ENST00000568919 FBLN2P98095 1184 aa31.93■■■□□ 2.7
SIN3A-212ENST00000568919 WRNQ14191 1432 aaPredicted RBP eCLIP31.91■■■□□ 2.7
SIN3A-212ENST00000568919 TRIM41Q8WV44 630 aa31.87■■■□□ 2.69
SIN3A-212ENST00000568919 CHD1O14646 1710 aa31.86■■■□□ 2.69
SIN3A-212ENST00000568919 ABCA10Q8WWZ4 1543 aa31.85■■■□□ 2.69
SIN3A-212ENST00000568919 GRIN2BQ13224 1484 aa31.84■■■□□ 2.69
SIN3A-212ENST00000568919 TOP2BQ02880 1626 aa31.84■■■□□ 2.69
SIN3A-212ENST00000568919 SNAPC4Q5SXM2 1469 aa31.84■■■□□ 2.69
SIN3A-212ENST00000568919 BIVM-ERCC5R4GMW8 1640 aa31.82■■■□□ 2.69
SIN3A-212ENST00000568919 SYNJ1O43426 1573 aa31.82■■■□□ 2.68
SIN3A-212ENST00000568919 GAPVD1Q14C86 1478 aa31.81■■■□□ 2.68
SIN3A-212ENST00000568919 CHMP7Q8WUX9 453 aaPredicted RBP31.78■■■□□ 2.68
SIN3A-212ENST00000568919 MAGI1Q96QZ7 1491 aaPredicted RBP31.77■■■□□ 2.68
SIN3A-212ENST00000568919 ABCA5Q8WWZ7 1642 aa31.71■■■□□ 2.67
SIN3A-212ENST00000568919 PBRM1Q86U86 1689 aa31.7■■■□□ 2.66
SIN3A-212ENST00000568919 RIMBP3CA6NJZ7 1639 aa31.69■■■□□ 2.66
SIN3A-212ENST00000568919 RIMBP3BA6NNM3 1639 aa31.69■■■□□ 2.66
SIN3A-212ENST00000568919 RIMBP3Q9UFD9 1639 aa31.69■■■□□ 2.66
SIN3A-212ENST00000568919 SYNJ2O15056 1496 aa31.66■■■□□ 2.66
SIN3A-212ENST00000568919 ARHGEF11O15085 1522 aa31.65■■■□□ 2.66
SIN3A-212ENST00000568919 CLASP1Q7Z460 1538 aa31.51■■■□□ 2.63
SIN3A-212ENST00000568919 CYB5RLQ6IPT4 315 aa31.49■■■□□ 2.63
SIN3A-212ENST00000568919 ERICH3Q5RHP9 1530 aa31.44■■■□□ 2.62
SIN3A-212ENST00000568919 FHAD1B1AJZ9 1412 aa31.43■■■□□ 2.62
SIN3A-212ENST00000568919 ADAMTS12P58397 1594 aa31.43■■■□□ 2.62
SIN3A-212ENST00000568919 GRIN2AQ12879 1464 aa31.41■■■□□ 2.62
SIN3A-212ENST00000568919 ARAP1Q96P48 1450 aa31.38■■■□□ 2.61
SIN3A-212ENST00000568919 NUP160Q12769 1436 aa31.31■■■□□ 2.6
SIN3A-212ENST00000568919 CEP170Q5SW79 1584 aa31.27■■■□□ 2.6
SIN3A-212ENST00000568919 KIF27Q86VH2 1401 aa31.27■■■□□ 2.6
SIN3A-212ENST00000568919 IGF1RP08069 1367 aa31.26■■■□□ 2.59
SIN3A-212ENST00000568919 ERCC6L2Q5T890 1561 aa31.09■■■□□ 2.57
SIN3A-212ENST00000568919 JPH4Q96JJ6 628 aa31.09■■■□□ 2.57
SIN3A-212ENST00000568919 SHROOM2Q13796 1616 aa31.07■■■□□ 2.56
SIN3A-212ENST00000568919 CUL7Q14999 1698 aa31.06■■■□□ 2.56
SIN3A-212ENST00000568919 CARMIL1Q5VZK9 1371 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms