RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 NISCHQ9Y2I1 1504 aa44.82■■■■■ 4.77
SYNGR3-205ENST00000568896 ABCC9O60706 1549 aa40.49■■■■■ 4.07
SYNGR3-205ENST00000568896 CCDC180Q9P1Z9 1646 aa40.13■■■■■ 4.01
SYNGR3-205ENST00000568896 RB1CC1Q8TDY2 1594 aa38.34■■■■□ 3.73
SYNGR3-205ENST00000568896 DNAJC5BQ9UF47 199 aa38.24■■■■□ 3.71
SYNGR3-205ENST00000568896 DCAF8L2P0C7V8 631 aa38.08■■■■□ 3.69
SYNGR3-205ENST00000568896 NACADO15069 1562 aa38.05■■■■□ 3.68
SYNGR3-205ENST00000568896 PABPN1Q86U42 306 aaKnown RBP eCLIP37.78■■■■□ 3.64
SYNGR3-205ENST00000568896 MYO15BQ96JP2 1530 aa37.44■■■■□ 3.58
SYNGR3-205ENST00000568896 UNC13AQ9UPW8 1703 aa37.43■■■■□ 3.58
SYNGR3-205ENST00000568896 BICRAQ9NZM4 1560 aa37.29■■■■□ 3.56
SYNGR3-205ENST00000568896 ZCCHC6Q5VYS8 1495 aaKnown RBP37.08■■■■□ 3.53
SYNGR3-205ENST00000568896 DCAF1Q9Y4B6 1507 aa36.93■■■■□ 3.5
SYNGR3-205ENST00000568896 SCRIBQ14160 1630 aa36.7■■■■□ 3.47
SYNGR3-205ENST00000568896 SHROOM4Q9ULL8 1493 aa36.64■■■■□ 3.46
SYNGR3-205ENST00000568896 CC2D2AQ9P2K1 1620 aa36.49■■■■□ 3.43
SYNGR3-205ENST00000568896 CECR2Q9BXF3 1484 aa36.46■■■■□ 3.43
SYNGR3-205ENST00000568896 EIF4G1Q04637 1599 aaKnown RBP36.37■■■■□ 3.41
SYNGR3-205ENST00000568896 NCAPD3P42695 1498 aa35.19■■■■□ 3.22
SYNGR3-205ENST00000568896 DNAJC5Q9H3Z4 198 aa35.13■■■■□ 3.21
SYNGR3-205ENST00000568896 ATAD2BQ9ULI0 1458 aa35.09■■■■□ 3.21
SYNGR3-205ENST00000568896 SMARCA4P51532 1647 aa34.95■■■■□ 3.18
SYNGR3-205ENST00000568896 ERCC6Q03468 1493 aa34.91■■■■□ 3.18
SYNGR3-205ENST00000568896 SMARCA2P51531 1590 aa34.89■■■■□ 3.18
SYNGR3-205ENST00000568896 CUX2O14529 1486 aa34.84■■■■□ 3.17
SYNGR3-205ENST00000568896 HMGXB3Q12766 1538 aa34.84■■■■□ 3.17
SYNGR3-205ENST00000568896 NESP48681 1621 aa34.75■■■■□ 3.15
SYNGR3-205ENST00000568896 BAZ1AQ9NRL2 1556 aaPredicted RBP34.74■■■■□ 3.15
SYNGR3-205ENST00000568896 BAZ1BQ9UIG0 1483 aaKnown RBP34.71■■■■□ 3.15
SYNGR3-205ENST00000568896 MROH2BQ7Z745 1585 aa34.57■■■■□ 3.13
SYNGR3-205ENST00000568896 PEG3Q9GZU2 1588 aa34.57■■■■□ 3.13
SYNGR3-205ENST00000568896 LAMC3Q9Y6N6 1575 aa34.35■■■■□ 3.09
SYNGR3-205ENST00000568896 THOC2Q8NI27 1593 aaKnown RBP34.31■■■■□ 3.08
SYNGR3-205ENST00000568896 PDS5BQ9NTI5 1447 aa34.22■■■■□ 3.07
SYNGR3-205ENST00000568896 KIF21AQ7Z4S6 1674 aa34.17■■■■□ 3.06
SYNGR3-205ENST00000568896 CADPSQ9ULU8 1353 aa34.15■■■■□ 3.06
SYNGR3-205ENST00000568896 WIZO95785 1651 aa34.12■■■■□ 3.05
SYNGR3-205ENST00000568896 MRC2Q9UBG0 1479 aa33.93■■■■□ 3.02
SYNGR3-205ENST00000568896 RSF1Q96T23 1441 aaPredicted RBP33.84■■■■□ 3.01
SYNGR3-205ENST00000568896 WDR62O43379 1518 aa33.82■■■■□ 3
SYNGR3-205ENST00000568896 CEP164Q9UPV0 1460 aa33.76■■■□□ 2.99
SYNGR3-205ENST00000568896 FANCD2Q9BXW9 1451 aa33.75■■■□□ 2.99
SYNGR3-205ENST00000568896 CFTRP13569 1480 aa33.7■■■□□ 2.99
SYNGR3-205ENST00000568896 TOP2AP11388 1531 aaKnown RBP33.63■■■□□ 2.97
SYNGR3-205ENST00000568896 TRIM41Q8WV44 630 aa33.59■■■□□ 2.97
SYNGR3-205ENST00000568896 URB2Q14146 1524 aaKnown RBP33.48■■■□□ 2.95
SYNGR3-205ENST00000568896 OSCARQ8IYS5 282 aa33.35■■■□□ 2.93
SYNGR3-205ENST00000568896 CCDC88BA6NC98 1476 aa33.35■■■□□ 2.93
SYNGR3-205ENST00000568896 PRDM2Q13029 1718 aa33.16■■■□□ 2.9
SYNGR3-205ENST00000568896 ZNF608Q9ULD9 1512 aaPredicted RBP33.13■■■□□ 2.89
SYNGR3-205ENST00000568896 IFT140Q96RY7 1462 aa33.1■■■□□ 2.89
SYNGR3-205ENST00000568896 TOPBP1Q92547 1522 aa33.08■■■□□ 2.89
SYNGR3-205ENST00000568896 SUPT5HO00267 1087 aaKnown RBP33■■■□□ 2.87
SYNGR3-205ENST00000568896 ABCC8Q09428 1581 aa32.94■■■□□ 2.86
SYNGR3-205ENST00000568896 DNMBPQ6XZF7 1577 aa32.9■■■□□ 2.86
SYNGR3-205ENST00000568896 RIMBP3CA6NJZ7 1639 aa32.84■■■□□ 2.85
SYNGR3-205ENST00000568896 RIMBP3BA6NNM3 1639 aa32.84■■■□□ 2.85
SYNGR3-205ENST00000568896 RIMBP3Q9UFD9 1639 aa32.84■■■□□ 2.85
SYNGR3-205ENST00000568896 AQRO60306 1485 aaKnown RBP eCLIP32.84■■■□□ 2.85
SYNGR3-205ENST00000568896 EIF4G3O43432 1585 aaKnown RBP32.83■■■□□ 2.85
SYNGR3-205ENST00000568896 TARBP1Q13395 1621 aaKnown RBP32.76■■■□□ 2.83
SYNGR3-205ENST00000568896 ARHGEF11O15085 1522 aa32.75■■■□□ 2.83
SYNGR3-205ENST00000568896 POLA1P09884 1462 aaPredicted RBP32.74■■■□□ 2.83
SYNGR3-205ENST00000568896 RAD54L2Q9Y4B4 1467 aa32.69■■■□□ 2.82
SYNGR3-205ENST00000568896 FBLN2P98095 1184 aa32.69■■■□□ 2.82
SYNGR3-205ENST00000568896 CYB5RLQ6IPT4 315 aa32.64■■■□□ 2.82
SYNGR3-205ENST00000568896 SOGA1O94964 1423 aa32.63■■■□□ 2.81
SYNGR3-205ENST00000568896 TDRD9Q8NDG6 1382 aaKnown RBP32.63■■■□□ 2.81
SYNGR3-205ENST00000568896 CHD1O14646 1710 aa32.59■■■□□ 2.81
SYNGR3-205ENST00000568896 FGD5Q6ZNL6 1462 aa32.52■■■□□ 2.8
SYNGR3-205ENST00000568896 CUX1P39880 1505 aa32.47■■■□□ 2.79
SYNGR3-205ENST00000568896 SNAPC4Q5SXM2 1469 aa32.44■■■□□ 2.78
SYNGR3-205ENST00000568896 ARAP1Q96P48 1450 aa32.44■■■□□ 2.78
SYNGR3-205ENST00000568896 CHMP7Q8WUX9 453 aaPredicted RBP32.39■■■□□ 2.78
SYNGR3-205ENST00000568896 WDR97A6NE52 1622 aa32.31■■■□□ 2.76
SYNGR3-205ENST00000568896 TRHP20396 242 aaPredicted RBP32.31■■■□□ 2.76
SYNGR3-205ENST00000568896 GRIN2BQ13224 1484 aa32.3■■■□□ 2.76
SYNGR3-205ENST00000568896 MAGI1Q96QZ7 1491 aaPredicted RBP32.29■■■□□ 2.76
SYNGR3-205ENST00000568896 CLASP1Q7Z460 1538 aa32.26■■■□□ 2.76
SYNGR3-205ENST00000568896 SYNJ2O15056 1496 aa32.21■■■□□ 2.75
SYNGR3-205ENST00000568896 SYNJ1O43426 1573 aa32.19■■■□□ 2.74
SYNGR3-205ENST00000568896 GAPVD1Q14C86 1478 aa32.19■■■□□ 2.74
SYNGR3-205ENST00000568896 ABCA10Q8WWZ4 1543 aa32.11■■■□□ 2.73
SYNGR3-205ENST00000568896 PBRM1Q86U86 1689 aa32.08■■■□□ 2.73
SYNGR3-205ENST00000568896 ABCA5Q8WWZ7 1642 aa32.04■■■□□ 2.72
SYNGR3-205ENST00000568896 WRNQ14191 1432 aaPredicted RBP eCLIP31.98■■■□□ 2.71
SYNGR3-205ENST00000568896 GRIN2AQ12879 1464 aa31.89■■■□□ 2.7
SYNGR3-205ENST00000568896 TOP2BQ02880 1626 aa31.85■■■□□ 2.69
SYNGR3-205ENST00000568896 ERCC6L2Q5T890 1561 aa31.83■■■□□ 2.69
SYNGR3-205ENST00000568896 BIVM-ERCC5R4GMW8 1640 aa31.82■■■□□ 2.69
SYNGR3-205ENST00000568896 ADAMTS12P58397 1594 aa31.81■■■□□ 2.68
SYNGR3-205ENST00000568896 NUP160Q12769 1436 aa31.8■■■□□ 2.68
SYNGR3-205ENST00000568896 CEP170Q5SW79 1584 aa31.78■■■□□ 2.68
SYNGR3-205ENST00000568896 FHAD1B1AJZ9 1412 aa31.77■■■□□ 2.68
SYNGR3-205ENST00000568896 ERICH3Q5RHP9 1530 aa31.67■■■□□ 2.66
SYNGR3-205ENST00000568896 SHROOM2Q13796 1616 aa31.6■■■□□ 2.65
SYNGR3-205ENST00000568896 JPH4Q96JJ6 628 aa31.56■■■□□ 2.64
SYNGR3-205ENST00000568896 PRG4Q92954 1404 aaPredicted RBP31.55■■■□□ 2.64
SYNGR3-205ENST00000568896 AEBP2Q6ZN18 517 aaPredicted RBP31.43■■■□□ 2.62
SYNGR3-205ENST00000568896 IGF1RP08069 1367 aa31.37■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms