RNA–Protein interactions for RNA: ENST00000568837.1

IFT140-209, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-209ENST00000568837 NISCHQ9Y2I1 1504 aa22.43■■□□□ 1.18
IFT140-209ENST00000568837 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
IFT140-209ENST00000568837 ABCC9O60706 1549 aa19.87■□□□□ 0.77
IFT140-209ENST00000568837 RB1CC1Q8TDY2 1594 aa18.91■□□□□ 0.62
IFT140-209ENST00000568837 DCAF8L2P0C7V8 631 aa18.9■□□□□ 0.62
IFT140-209ENST00000568837 NACADO15069 1562 aa18.84■□□□□ 0.61
IFT140-209ENST00000568837 ZCCHC6Q5VYS8 1495 aaKnown RBP18.65■□□□□ 0.58
IFT140-209ENST00000568837 MYO15BQ96JP2 1530 aa18.64■□□□□ 0.57
IFT140-209ENST00000568837 PABPN1Q86U42 306 aaKnown RBP eCLIP18.58■□□□□ 0.56
IFT140-209ENST00000568837 DNAJC5BQ9UF47 199 aa18.51■□□□□ 0.55
IFT140-209ENST00000568837 DCAF1Q9Y4B6 1507 aa18.49■□□□□ 0.55
IFT140-209ENST00000568837 UNC13AQ9UPW8 1703 aa18.43■□□□□ 0.54
IFT140-209ENST00000568837 BICRAQ9NZM4 1560 aa18.42■□□□□ 0.54
IFT140-209ENST00000568837 SCRIBQ14160 1630 aa18.28■□□□□ 0.52
IFT140-209ENST00000568837 SHROOM4Q9ULL8 1493 aa18.1■□□□□ 0.49
IFT140-209ENST00000568837 EIF4G1Q04637 1599 aaKnown RBP17.92■□□□□ 0.46
IFT140-209ENST00000568837 CC2D2AQ9P2K1 1620 aa17.9■□□□□ 0.46
IFT140-209ENST00000568837 CECR2Q9BXF3 1484 aa17.86■□□□□ 0.45
IFT140-209ENST00000568837 NCAPD3P42695 1498 aa17.44■□□□□ 0.38
IFT140-209ENST00000568837 ATAD2BQ9ULI0 1458 aa17.44■□□□□ 0.38
IFT140-209ENST00000568837 SMARCA4P51532 1647 aa17.43■□□□□ 0.38
IFT140-209ENST00000568837 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
IFT140-209ENST00000568837 SMARCA2P51531 1590 aa17.33■□□□□ 0.37
IFT140-209ENST00000568837 MROH2BQ7Z745 1585 aa17.32■□□□□ 0.36
IFT140-209ENST00000568837 HMGXB3Q12766 1538 aa17.29■□□□□ 0.36
IFT140-209ENST00000568837 BAZ1BQ9UIG0 1483 aaKnown RBP17.25■□□□□ 0.35
IFT140-209ENST00000568837 PEG3Q9GZU2 1588 aa17.24■□□□□ 0.35
IFT140-209ENST00000568837 NESP48681 1621 aa17.15■□□□□ 0.34
IFT140-209ENST00000568837 ERCC6Q03468 1493 aa17.11■□□□□ 0.33
IFT140-209ENST00000568837 WIZO95785 1651 aa17.08■□□□□ 0.32
IFT140-209ENST00000568837 RSF1Q96T23 1441 aaPredicted RBP17.04■□□□□ 0.32
IFT140-209ENST00000568837 CUX2O14529 1486 aa16.96■□□□□ 0.31
IFT140-209ENST00000568837 LAMC3Q9Y6N6 1575 aa16.95■□□□□ 0.3
IFT140-209ENST00000568837 CADPSQ9ULU8 1353 aa16.92■□□□□ 0.3
IFT140-209ENST00000568837 PDS5BQ9NTI5 1447 aa16.88■□□□□ 0.29
IFT140-209ENST00000568837 TOP2AP11388 1531 aaKnown RBP16.88■□□□□ 0.29
IFT140-209ENST00000568837 THOC2Q8NI27 1593 aaKnown RBP16.86■□□□□ 0.29
IFT140-209ENST00000568837 KIF21AQ7Z4S6 1674 aa16.83■□□□□ 0.28
IFT140-209ENST00000568837 CFTRP13569 1480 aa16.78■□□□□ 0.28
IFT140-209ENST00000568837 DNAJC5Q9H3Z4 198 aa16.77■□□□□ 0.28
IFT140-209ENST00000568837 MRC2Q9UBG0 1479 aa16.74■□□□□ 0.27
IFT140-209ENST00000568837 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
IFT140-209ENST00000568837 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
IFT140-209ENST00000568837 CEP164Q9UPV0 1460 aa16.71■□□□□ 0.27
IFT140-209ENST00000568837 WDR62O43379 1518 aa16.69■□□□□ 0.26
IFT140-209ENST00000568837 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
IFT140-209ENST00000568837 SUPT5HO00267 1087 aaKnown RBP16.49■□□□□ 0.23
IFT140-209ENST00000568837 PRDM2Q13029 1718 aa16.47■□□□□ 0.23
IFT140-209ENST00000568837 TOPBP1Q92547 1522 aa16.44■□□□□ 0.22
IFT140-209ENST00000568837 ZNF608Q9ULD9 1512 aaPredicted RBP16.39■□□□□ 0.21
IFT140-209ENST00000568837 IFT140Q96RY7 1462 aa16.37■□□□□ 0.21
IFT140-209ENST00000568837 DNMBPQ6XZF7 1577 aa16.37■□□□□ 0.21
IFT140-209ENST00000568837 ABCC8Q09428 1581 aa16.34■□□□□ 0.21
IFT140-209ENST00000568837 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
IFT140-209ENST00000568837 RAD54L2Q9Y4B4 1467 aa16.27■□□□□ 0.19
IFT140-209ENST00000568837 OSCARQ8IYS5 282 aa16.26■□□□□ 0.19
IFT140-209ENST00000568837 AQRO60306 1485 aaKnown RBP eCLIP16.26■□□□□ 0.19
IFT140-209ENST00000568837 TARBP1Q13395 1621 aaKnown RBP16.26■□□□□ 0.19
IFT140-209ENST00000568837 CUX1P39880 1505 aa16.25■□□□□ 0.19
IFT140-209ENST00000568837 EIF4G3O43432 1585 aaKnown RBP16.24■□□□□ 0.19
IFT140-209ENST00000568837 FGD5Q6ZNL6 1462 aa16.22■□□□□ 0.19
IFT140-209ENST00000568837 SOGA1O94964 1423 aa16.22■□□□□ 0.19
IFT140-209ENST00000568837 TDRD9Q8NDG6 1382 aaKnown RBP16.21■□□□□ 0.19
IFT140-209ENST00000568837 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
IFT140-209ENST00000568837 FBLN2P98095 1184 aa16.1■□□□□ 0.17
IFT140-209ENST00000568837 SNAPC4Q5SXM2 1469 aa16.08■□□□□ 0.16
IFT140-209ENST00000568837 WRNQ14191 1432 aaPredicted RBP eCLIP16.05■□□□□ 0.16
IFT140-209ENST00000568837 GRIN2BQ13224 1484 aa16.04■□□□□ 0.16
IFT140-209ENST00000568837 CHD1O14646 1710 aa16.04■□□□□ 0.16
IFT140-209ENST00000568837 SYNJ1O43426 1573 aa16.04■□□□□ 0.16
IFT140-209ENST00000568837 WDR97A6NE52 1622 aa16.03■□□□□ 0.16
IFT140-209ENST00000568837 ABCA10Q8WWZ4 1543 aa16.03■□□□□ 0.16
IFT140-209ENST00000568837 GAPVD1Q14C86 1478 aa16.02■□□□□ 0.15
IFT140-209ENST00000568837 ARHGEF11O15085 1522 aa16.01■□□□□ 0.15
IFT140-209ENST00000568837 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
IFT140-209ENST00000568837 RIMBP3BA6NNM3 1639 aa16.01■□□□□ 0.15
IFT140-209ENST00000568837 RIMBP3Q9UFD9 1639 aa16.01■□□□□ 0.15
IFT140-209ENST00000568837 MAGI1Q96QZ7 1491 aaPredicted RBP16■□□□□ 0.15
IFT140-209ENST00000568837 TOP2BQ02880 1626 aa16■□□□□ 0.15
IFT140-209ENST00000568837 CHMP7Q8WUX9 453 aaPredicted RBP15.99■□□□□ 0.15
IFT140-209ENST00000568837 ABCA5Q8WWZ7 1642 aa15.97■□□□□ 0.15
IFT140-209ENST00000568837 BIVM-ERCC5R4GMW8 1640 aa15.97■□□□□ 0.15
IFT140-209ENST00000568837 SYNJ2O15056 1496 aa15.97■□□□□ 0.15
IFT140-209ENST00000568837 PBRM1Q86U86 1689 aa15.92■□□□□ 0.14
IFT140-209ENST00000568837 CLASP1Q7Z460 1538 aa15.91■□□□□ 0.14
IFT140-209ENST00000568837 CYB5RLQ6IPT4 315 aa15.91■□□□□ 0.14
IFT140-209ENST00000568837 ARAP1Q96P48 1450 aa15.89■□□□□ 0.13
IFT140-209ENST00000568837 ADAMTS12P58397 1594 aa15.85■□□□□ 0.13
IFT140-209ENST00000568837 GRIN2AQ12879 1464 aa15.84■□□□□ 0.13
IFT140-209ENST00000568837 FHAD1B1AJZ9 1412 aa15.82■□□□□ 0.12
IFT140-209ENST00000568837 ERICH3Q5RHP9 1530 aa15.81■□□□□ 0.12
IFT140-209ENST00000568837 CEP170Q5SW79 1584 aa15.79■□□□□ 0.12
IFT140-209ENST00000568837 NUP160Q12769 1436 aa15.78■□□□□ 0.12
IFT140-209ENST00000568837 ERCC6L2Q5T890 1561 aa15.74■□□□□ 0.11
IFT140-209ENST00000568837 IGF1RP08069 1367 aa15.73■□□□□ 0.11
IFT140-209ENST00000568837 KIF27Q86VH2 1401 aa15.71■□□□□ 0.11
IFT140-209ENST00000568837 SHROOM2Q13796 1616 aa15.65■□□□□ 0.1
IFT140-209ENST00000568837 TRHP20396 242 aaPredicted RBP15.64■□□□□ 0.09
IFT140-209ENST00000568837 PRG4Q92954 1404 aaPredicted RBP15.63■□□□□ 0.09
IFT140-209ENST00000568837 JPH4Q96JJ6 628 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms