RNA–Protein interactions for RNA: ENST00000568792.1

KDM8-211, Transcript of lysine demethylase 8, humanhuman

TSL 4

Gene KDM8, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM8-211ENST00000568792 NISCHQ9Y2I1 1504 aa30.97■■■□□ 2.55
KDM8-211ENST00000568792 CCDC180Q9P1Z9 1646 aa27.89■■■□□ 2.05
KDM8-211ENST00000568792 ABCC9O60706 1549 aa27.8■■■□□ 2.04
KDM8-211ENST00000568792 RB1CC1Q8TDY2 1594 aa26.56■■□□□ 1.84
KDM8-211ENST00000568792 NACADO15069 1562 aa26.37■■□□□ 1.81
KDM8-211ENST00000568792 DCAF8L2P0C7V8 631 aa26.12■■□□□ 1.77
KDM8-211ENST00000568792 DNAJC5BQ9UF47 199 aa26.05■■□□□ 1.76
KDM8-211ENST00000568792 MYO15BQ96JP2 1530 aa26.04■■□□□ 1.76
KDM8-211ENST00000568792 UNC13AQ9UPW8 1703 aa25.85■■□□□ 1.73
KDM8-211ENST00000568792 PABPN1Q86U42 306 aaKnown RBP eCLIP25.85■■□□□ 1.73
KDM8-211ENST00000568792 BICRAQ9NZM4 1560 aa25.68■■□□□ 1.7
KDM8-211ENST00000568792 DCAF1Q9Y4B6 1507 aa25.66■■□□□ 1.7
KDM8-211ENST00000568792 ZCCHC6Q5VYS8 1495 aaKnown RBP25.66■■□□□ 1.7
KDM8-211ENST00000568792 SHROOM4Q9ULL8 1493 aa25.53■■□□□ 1.68
KDM8-211ENST00000568792 SCRIBQ14160 1630 aa25.29■■□□□ 1.64
KDM8-211ENST00000568792 CC2D2AQ9P2K1 1620 aa25.15■■□□□ 1.62
KDM8-211ENST00000568792 CECR2Q9BXF3 1484 aa25.11■■□□□ 1.61
KDM8-211ENST00000568792 EIF4G1Q04637 1599 aaKnown RBP25.1■■□□□ 1.61
KDM8-211ENST00000568792 NCAPD3P42695 1498 aa24.32■■□□□ 1.48
KDM8-211ENST00000568792 SMARCA2P51531 1590 aa24.2■■□□□ 1.47
KDM8-211ENST00000568792 ATAD2BQ9ULI0 1458 aa24.2■■□□□ 1.47
KDM8-211ENST00000568792 SMARCA4P51532 1647 aa24.17■■□□□ 1.46
KDM8-211ENST00000568792 HMGXB3Q12766 1538 aa24.15■■□□□ 1.46
KDM8-211ENST00000568792 CUX2O14529 1486 aa24.11■■□□□ 1.45
KDM8-211ENST00000568792 DNAJC5Q9H3Z4 198 aa24.1■■□□□ 1.45
KDM8-211ENST00000568792 BAZ1AQ9NRL2 1556 aaPredicted RBP24.09■■□□□ 1.45
KDM8-211ENST00000568792 ERCC6Q03468 1493 aa24.09■■□□□ 1.45
KDM8-211ENST00000568792 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
KDM8-211ENST00000568792 PEG3Q9GZU2 1588 aa23.98■■□□□ 1.43
KDM8-211ENST00000568792 NESP48681 1621 aa23.84■■□□□ 1.41
KDM8-211ENST00000568792 LAMC3Q9Y6N6 1575 aa23.81■■□□□ 1.4
KDM8-211ENST00000568792 MROH2BQ7Z745 1585 aa23.8■■□□□ 1.4
KDM8-211ENST00000568792 PDS5BQ9NTI5 1447 aa23.68■■□□□ 1.38
KDM8-211ENST00000568792 THOC2Q8NI27 1593 aaKnown RBP23.67■■□□□ 1.38
KDM8-211ENST00000568792 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
KDM8-211ENST00000568792 CADPSQ9ULU8 1353 aa23.57■■□□□ 1.36
KDM8-211ENST00000568792 WIZO95785 1651 aa23.51■■□□□ 1.35
KDM8-211ENST00000568792 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
KDM8-211ENST00000568792 WDR62O43379 1518 aa23.38■■□□□ 1.33
KDM8-211ENST00000568792 CEP164Q9UPV0 1460 aa23.34■■□□□ 1.33
KDM8-211ENST00000568792 RSF1Q96T23 1441 aaPredicted RBP23.32■■□□□ 1.32
KDM8-211ENST00000568792 CFTRP13569 1480 aa23.29■■□□□ 1.32
KDM8-211ENST00000568792 TOP2AP11388 1531 aaKnown RBP23.28■■□□□ 1.32
KDM8-211ENST00000568792 FANCD2Q9BXW9 1451 aa23.28■■□□□ 1.32
KDM8-211ENST00000568792 PRDM2Q13029 1718 aa23.08■■□□□ 1.28
KDM8-211ENST00000568792 URB2Q14146 1524 aaKnown RBP23.05■■□□□ 1.28
KDM8-211ENST00000568792 OSCARQ8IYS5 282 aa22.99■■□□□ 1.27
KDM8-211ENST00000568792 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
KDM8-211ENST00000568792 TRIM41Q8WV44 630 aa22.96■■□□□ 1.27
KDM8-211ENST00000568792 ABCC8Q09428 1581 aa22.9■■□□□ 1.26
KDM8-211ENST00000568792 IFT140Q96RY7 1462 aa22.9■■□□□ 1.26
KDM8-211ENST00000568792 TOPBP1Q92547 1522 aa22.82■■□□□ 1.24
KDM8-211ENST00000568792 DNMBPQ6XZF7 1577 aa22.77■■□□□ 1.24
KDM8-211ENST00000568792 ZNF608Q9ULD9 1512 aaPredicted RBP22.75■■□□□ 1.23
KDM8-211ENST00000568792 EIF4G3O43432 1585 aaKnown RBP22.67■■□□□ 1.22
KDM8-211ENST00000568792 RIMBP3CA6NJZ7 1639 aa22.62■■□□□ 1.21
KDM8-211ENST00000568792 RIMBP3BA6NNM3 1639 aa22.62■■□□□ 1.21
KDM8-211ENST00000568792 RIMBP3Q9UFD9 1639 aa22.62■■□□□ 1.21
KDM8-211ENST00000568792 TARBP1Q13395 1621 aaKnown RBP22.61■■□□□ 1.21
KDM8-211ENST00000568792 POLA1P09884 1462 aaPredicted RBP22.59■■□□□ 1.21
KDM8-211ENST00000568792 AQRO60306 1485 aaKnown RBP eCLIP22.56■■□□□ 1.22e-6■■■□□ 15.2
KDM8-211ENST00000568792 ARHGEF11O15085 1522 aa22.56■■□□□ 1.2
KDM8-211ENST00000568792 WDR97A6NE52 1622 aa22.52■■□□□ 1.2
KDM8-211ENST00000568792 CHD1O14646 1710 aa22.51■■□□□ 1.19
KDM8-211ENST00000568792 SOGA1O94964 1423 aa22.5■■□□□ 1.19
KDM8-211ENST00000568792 RAD54L2Q9Y4B4 1467 aa22.46■■□□□ 1.19
KDM8-211ENST00000568792 FBLN2P98095 1184 aa22.45■■□□□ 1.18
KDM8-211ENST00000568792 FGD5Q6ZNL6 1462 aa22.43■■□□□ 1.18
KDM8-211ENST00000568792 TDRD9Q8NDG6 1382 aaKnown RBP22.42■■□□□ 1.18
KDM8-211ENST00000568792 CYB5RLQ6IPT4 315 aa22.38■■□□□ 1.17
KDM8-211ENST00000568792 CUX1P39880 1505 aa22.37■■□□□ 1.17
KDM8-211ENST00000568792 MAGI1Q96QZ7 1491 aaPredicted RBP22.37■■□□□ 1.17
KDM8-211ENST00000568792 SNAPC4Q5SXM2 1469 aa22.35■■□□□ 1.17
KDM8-211ENST00000568792 GRIN2BQ13224 1484 aa22.34■■□□□ 1.17
KDM8-211ENST00000568792 CHMP7Q8WUX9 453 aaPredicted RBP22.33■■□□□ 1.17
KDM8-211ENST00000568792 SYNJ1O43426 1573 aa22.31■■□□□ 1.16
KDM8-211ENST00000568792 ARAP1Q96P48 1450 aa22.3■■□□□ 1.16
KDM8-211ENST00000568792 SYNJ2O15056 1496 aa22.28■■□□□ 1.16
KDM8-211ENST00000568792 CLASP1Q7Z460 1538 aa22.26■■□□□ 1.15
KDM8-211ENST00000568792 GAPVD1Q14C86 1478 aa22.23■■□□□ 1.15
KDM8-211ENST00000568792 ABCA10Q8WWZ4 1543 aa22.21■■□□□ 1.15
KDM8-211ENST00000568792 PBRM1Q86U86 1689 aa22.21■■□□□ 1.15
KDM8-211ENST00000568792 SUPT5HO00267 1087 aaKnown RBP22.21■■□□□ 1.15
KDM8-211ENST00000568792 TRHP20396 242 aaPredicted RBP22.18■■□□□ 1.14
KDM8-211ENST00000568792 ABCA5Q8WWZ7 1642 aa22.16■■□□□ 1.14
KDM8-211ENST00000568792 WRNQ14191 1432 aaPredicted RBP eCLIP22.14■■□□□ 1.13
KDM8-211ENST00000568792 TOP2BQ02880 1626 aa22.06■■□□□ 1.12
KDM8-211ENST00000568792 BIVM-ERCC5R4GMW8 1640 aa22.06■■□□□ 1.12
KDM8-211ENST00000568792 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
KDM8-211ENST00000568792 ADAMTS12P58397 1594 aa21.99■■□□□ 1.11
KDM8-211ENST00000568792 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
KDM8-211ENST00000568792 ERICH3Q5RHP9 1530 aa21.96■■□□□ 1.11
KDM8-211ENST00000568792 NUP160Q12769 1436 aa21.96■■□□□ 1.11
KDM8-211ENST00000568792 CEP170Q5SW79 1584 aa21.91■■□□□ 1.1
KDM8-211ENST00000568792 SHROOM2Q13796 1616 aa21.87■■□□□ 1.09
KDM8-211ENST00000568792 ERCC6L2Q5T890 1561 aa21.82■■□□□ 1.08
KDM8-211ENST00000568792 PRG4Q92954 1404 aaPredicted RBP21.74■■□□□ 1.07
KDM8-211ENST00000568792 JPH4Q96JJ6 628 aa21.74■■□□□ 1.07
KDM8-211ENST00000568792 RUSC2Q8N2Y8 1516 aa21.68■■□□□ 1.06
KDM8-211ENST00000568792 KIF27Q86VH2 1401 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms