RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 NISCHQ9Y2I1 1504 aa25.17■■□□□ 1.62
UBR1-207ENST00000568782 CCDC180Q9P1Z9 1646 aa22.51■■□□□ 1.19
UBR1-207ENST00000568782 ABCC9O60706 1549 aa22.17■■□□□ 1.14
UBR1-207ENST00000568782 RB1CC1Q8TDY2 1594 aa21.31■■□□□ 1
UBR1-207ENST00000568782 DCAF8L2P0C7V8 631 aa21.29■■□□□ 1
UBR1-207ENST00000568782 NACADO15069 1562 aa21.21■□□□□ 0.99
UBR1-207ENST00000568782 MYO15BQ96JP2 1530 aa20.98■□□□□ 0.95
UBR1-207ENST00000568782 ZCCHC6Q5VYS8 1495 aaKnown RBP20.9■□□□□ 0.94
UBR1-207ENST00000568782 DCAF1Q9Y4B6 1507 aa20.82■□□□□ 0.92
UBR1-207ENST00000568782 UNC13AQ9UPW8 1703 aa20.78■□□□□ 0.92
UBR1-207ENST00000568782 PABPN1Q86U42 306 aaKnown RBP eCLIP20.7■□□□□ 0.9
UBR1-207ENST00000568782 BICRAQ9NZM4 1560 aa20.53■□□□□ 0.88
UBR1-207ENST00000568782 SCRIBQ14160 1630 aa20.51■□□□□ 0.87
UBR1-207ENST00000568782 DNAJC5BQ9UF47 199 aa20.42■□□□□ 0.86
UBR1-207ENST00000568782 SHROOM4Q9ULL8 1493 aa20.4■□□□□ 0.86
UBR1-207ENST00000568782 EIF4G1Q04637 1599 aaKnown RBP20.08■□□□□ 0.8
UBR1-207ENST00000568782 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
UBR1-207ENST00000568782 CECR2Q9BXF3 1484 aa19.96■□□□□ 0.79
UBR1-207ENST00000568782 SMARCA4P51532 1647 aa19.58■□□□□ 0.73
UBR1-207ENST00000568782 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
UBR1-207ENST00000568782 SMARCA2P51531 1590 aa19.54■□□□□ 0.72
UBR1-207ENST00000568782 NCAPD3P42695 1498 aa19.53■□□□□ 0.72
UBR1-207ENST00000568782 ATAD2BQ9ULI0 1458 aa19.5■□□□□ 0.71
UBR1-207ENST00000568782 HMGXB3Q12766 1538 aa19.43■□□□□ 0.7
UBR1-207ENST00000568782 BAZ1BQ9UIG0 1483 aaKnown RBP19.4■□□□□ 0.7
UBR1-207ENST00000568782 MROH2BQ7Z745 1585 aa19.36■□□□□ 0.69
UBR1-207ENST00000568782 PEG3Q9GZU2 1588 aa19.36■□□□□ 0.69
UBR1-207ENST00000568782 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
UBR1-207ENST00000568782 WIZO95785 1651 aa19.19■□□□□ 0.66
UBR1-207ENST00000568782 LAMC3Q9Y6N6 1575 aa19.1■□□□□ 0.65
UBR1-207ENST00000568782 RSF1Q96T23 1441 aaPredicted RBP19.09■□□□□ 0.65
UBR1-207ENST00000568782 NESP48681 1621 aa19.09■□□□□ 0.65
UBR1-207ENST00000568782 CUX2O14529 1486 aa19.02■□□□□ 0.63
UBR1-207ENST00000568782 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
UBR1-207ENST00000568782 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
UBR1-207ENST00000568782 TOP2AP11388 1531 aaKnown RBP18.97■□□□□ 0.63
UBR1-207ENST00000568782 KIF21AQ7Z4S6 1674 aa18.92■□□□□ 0.62
UBR1-207ENST00000568782 THOC2Q8NI27 1593 aaKnown RBP18.84■□□□□ 0.61
UBR1-207ENST00000568782 CFTRP13569 1480 aa18.8■□□□□ 0.6
UBR1-207ENST00000568782 CEP164Q9UPV0 1460 aa18.79■□□□□ 0.6
UBR1-207ENST00000568782 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.59
UBR1-207ENST00000568782 MRC2Q9UBG0 1479 aa18.77■□□□□ 0.59
UBR1-207ENST00000568782 CCDC88BA6NC98 1476 aa18.74■□□□□ 0.59
UBR1-207ENST00000568782 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
UBR1-207ENST00000568782 WDR62O43379 1518 aa18.68■□□□□ 0.58
UBR1-207ENST00000568782 DNAJC5Q9H3Z4 198 aa18.64■□□□□ 0.57
UBR1-207ENST00000568782 SUPT5HO00267 1087 aaKnown RBP18.61■□□□□ 0.57
UBR1-207ENST00000568782 URB2Q14146 1524 aaKnown RBP18.53■□□□□ 0.56
UBR1-207ENST00000568782 ABCC8Q09428 1581 aa18.51■□□□□ 0.55
UBR1-207ENST00000568782 TOPBP1Q92547 1522 aa18.42■□□□□ 0.54
UBR1-207ENST00000568782 DNMBPQ6XZF7 1577 aa18.41■□□□□ 0.54
UBR1-207ENST00000568782 IFT140Q96RY7 1462 aa18.39■□□□□ 0.53
UBR1-207ENST00000568782 OSCARQ8IYS5 282 aa18.28■□□□□ 0.52
UBR1-207ENST00000568782 ZNF608Q9ULD9 1512 aaPredicted RBP18.24■□□□□ 0.51
UBR1-207ENST00000568782 POLA1P09884 1462 aaPredicted RBP18.24■□□□□ 0.51
UBR1-207ENST00000568782 SOGA1O94964 1423 aa18.23■□□□□ 0.51
UBR1-207ENST00000568782 EIF4G3O43432 1585 aaKnown RBP18.21■□□□□ 0.51
UBR1-207ENST00000568782 TARBP1Q13395 1621 aaKnown RBP18.21■□□□□ 0.51
UBR1-207ENST00000568782 FGD5Q6ZNL6 1462 aa18.2■□□□□ 0.5
UBR1-207ENST00000568782 CUX1P39880 1505 aa18.18■□□□□ 0.5
UBR1-207ENST00000568782 AQRO60306 1485 aaKnown RBP eCLIP18.16■□□□□ 0.5
UBR1-207ENST00000568782 RAD54L2Q9Y4B4 1467 aa18.16■□□□□ 0.5
UBR1-207ENST00000568782 WDR97A6NE52 1622 aa18.13■□□□□ 0.49
UBR1-207ENST00000568782 FBLN2P98095 1184 aa18.12■□□□□ 0.49
UBR1-207ENST00000568782 TDRD9Q8NDG6 1382 aaKnown RBP18.12■□□□□ 0.49
UBR1-207ENST00000568782 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
UBR1-207ENST00000568782 CHD1O14646 1710 aa18.06■□□□□ 0.48
UBR1-207ENST00000568782 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
UBR1-207ENST00000568782 TRIM41Q8WV44 630 aa18.03■□□□□ 0.48
UBR1-207ENST00000568782 GRIN2BQ13224 1484 aa18.02■□□□□ 0.48
UBR1-207ENST00000568782 TOP2BQ02880 1626 aa18.02■□□□□ 0.48
UBR1-207ENST00000568782 BIVM-ERCC5R4GMW8 1640 aa18.02■□□□□ 0.48
UBR1-207ENST00000568782 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
UBR1-207ENST00000568782 ABCA10Q8WWZ4 1543 aa18■□□□□ 0.47
UBR1-207ENST00000568782 SNAPC4Q5SXM2 1469 aa18■□□□□ 0.47
UBR1-207ENST00000568782 MAGI1Q96QZ7 1491 aaPredicted RBP18■□□□□ 0.47
UBR1-207ENST00000568782 PBRM1Q86U86 1689 aa17.99■□□□□ 0.47
UBR1-207ENST00000568782 SYNJ1O43426 1573 aa17.97■□□□□ 0.47
UBR1-207ENST00000568782 ABCA5Q8WWZ7 1642 aa17.92■□□□□ 0.46
UBR1-207ENST00000568782 SYNJ2O15056 1496 aa17.92■□□□□ 0.46
UBR1-207ENST00000568782 RIMBP3CA6NJZ7 1639 aa17.91■□□□□ 0.46
UBR1-207ENST00000568782 RIMBP3BA6NNM3 1639 aa17.91■□□□□ 0.46
UBR1-207ENST00000568782 RIMBP3Q9UFD9 1639 aa17.91■□□□□ 0.46
UBR1-207ENST00000568782 ARHGEF11O15085 1522 aa17.88■□□□□ 0.45
UBR1-207ENST00000568782 ERICH3Q5RHP9 1530 aa17.82■□□□□ 0.44
UBR1-207ENST00000568782 CYB5RLQ6IPT4 315 aa17.8■□□□□ 0.44
UBR1-207ENST00000568782 FHAD1B1AJZ9 1412 aa17.79■□□□□ 0.44
UBR1-207ENST00000568782 ADAMTS12P58397 1594 aa17.78■□□□□ 0.44
UBR1-207ENST00000568782 CLASP1Q7Z460 1538 aa17.77■□□□□ 0.44
UBR1-207ENST00000568782 GRIN2AQ12879 1464 aa17.77■□□□□ 0.44
UBR1-207ENST00000568782 KIF27Q86VH2 1401 aa17.74■□□□□ 0.43
UBR1-207ENST00000568782 ARAP1Q96P48 1450 aa17.68■□□□□ 0.42
UBR1-207ENST00000568782 NUP160Q12769 1436 aa17.66■□□□□ 0.42
UBR1-207ENST00000568782 CUL7Q14999 1698 aa17.65■□□□□ 0.42
UBR1-207ENST00000568782 CEP170Q5SW79 1584 aa17.65■□□□□ 0.42
UBR1-207ENST00000568782 IGF1RP08069 1367 aa17.62■□□□□ 0.41
UBR1-207ENST00000568782 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.4
UBR1-207ENST00000568782 JPH4Q96JJ6 628 aa17.58■□□□□ 0.4
UBR1-207ENST00000568782 CARMIL1Q5VZK9 1371 aa17.57■□□□□ 0.4
UBR1-207ENST00000568782 SHROOM2Q13796 1616 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms