RNA–Protein interactions for RNA: ENST00000568760.5

DEF8-223, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 4

Gene DEF8, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-223ENST00000568760 NISCHQ9Y2I1 1504 aa38.69■■■■□ 3.78
DEF8-223ENST00000568760 ABCC9O60706 1549 aa34.6■■■■□ 3.13
DEF8-223ENST00000568760 CCDC180Q9P1Z9 1646 aa34.55■■■■□ 3.12
DEF8-223ENST00000568760 RB1CC1Q8TDY2 1594 aa32.92■■■□□ 2.86
DEF8-223ENST00000568760 DCAF8L2P0C7V8 631 aa32.87■■■□□ 2.85
DEF8-223ENST00000568760 DNAJC5BQ9UF47 199 aa32.75■■■□□ 2.83
DEF8-223ENST00000568760 NACADO15069 1562 aa32.72■■■□□ 2.83
DEF8-223ENST00000568760 PABPN1Q86U42 306 aaKnown RBP eCLIP32.34■■■□□ 2.77
DEF8-223ENST00000568760 MYO15BQ96JP2 1530 aa32.29■■■□□ 2.76
DEF8-223ENST00000568760 UNC13AQ9UPW8 1703 aa32.09■■■□□ 2.73
DEF8-223ENST00000568760 ZCCHC6Q5VYS8 1495 aaKnown RBP32.04■■■□□ 2.72
DEF8-223ENST00000568760 BICRAQ9NZM4 1560 aa31.93■■■□□ 2.7
DEF8-223ENST00000568760 DCAF1Q9Y4B6 1507 aa31.92■■■□□ 2.7
DEF8-223ENST00000568760 SCRIBQ14160 1630 aa31.57■■■□□ 2.64
DEF8-223ENST00000568760 SHROOM4Q9ULL8 1493 aa31.47■■■□□ 2.63
DEF8-223ENST00000568760 CC2D2AQ9P2K1 1620 aa31.2■■■□□ 2.58
DEF8-223ENST00000568760 CECR2Q9BXF3 1484 aa31.16■■■□□ 2.58
DEF8-223ENST00000568760 EIF4G1Q04637 1599 aaKnown RBP31.15■■■□□ 2.58
DEF8-223ENST00000568760 DNAJC5Q9H3Z4 198 aa30.63■■■□□ 2.49
DEF8-223ENST00000568760 NCAPD3P42695 1498 aa30.25■■■□□ 2.43
DEF8-223ENST00000568760 ATAD2BQ9ULI0 1458 aa30.18■■■□□ 2.42
DEF8-223ENST00000568760 SMARCA4P51532 1647 aa30.11■■■□□ 2.41
DEF8-223ENST00000568760 CUX2O14529 1486 aa30.08■■■□□ 2.41
DEF8-223ENST00000568760 SMARCA2P51531 1590 aa30.05■■■□□ 2.4
DEF8-223ENST00000568760 BAZ1AQ9NRL2 1556 aaPredicted RBP30.01■■■□□ 2.39
DEF8-223ENST00000568760 HMGXB3Q12766 1538 aa29.95■■■□□ 2.38
DEF8-223ENST00000568760 BAZ1BQ9UIG0 1483 aaKnown RBP29.88■■■□□ 2.37
DEF8-223ENST00000568760 ERCC6Q03468 1493 aa29.86■■■□□ 2.37
DEF8-223ENST00000568760 MROH2BQ7Z745 1585 aa29.83■■■□□ 2.37
DEF8-223ENST00000568760 PEG3Q9GZU2 1588 aa29.8■■■□□ 2.36
DEF8-223ENST00000568760 NESP48681 1621 aa29.74■■■□□ 2.35
DEF8-223ENST00000568760 LAMC3Q9Y6N6 1575 aa29.49■■■□□ 2.31
DEF8-223ENST00000568760 WIZO95785 1651 aa29.46■■■□□ 2.31
DEF8-223ENST00000568760 PDS5BQ9NTI5 1447 aa29.41■■■□□ 2.3
DEF8-223ENST00000568760 CADPSQ9ULU8 1353 aa29.39■■■□□ 2.29
DEF8-223ENST00000568760 THOC2Q8NI27 1593 aaKnown RBP29.3■■■□□ 2.28
DEF8-223ENST00000568760 RSF1Q96T23 1441 aaPredicted RBP29.29■■■□□ 2.28
DEF8-223ENST00000568760 KIF21AQ7Z4S6 1674 aa29.27■■■□□ 2.28
DEF8-223ENST00000568760 MRC2Q9UBG0 1479 aa29.09■■■□□ 2.25
DEF8-223ENST00000568760 TOP2AP11388 1531 aaKnown RBP29.06■■■□□ 2.24
DEF8-223ENST00000568760 CFTRP13569 1480 aa29.02■■■□□ 2.24
DEF8-223ENST00000568760 FANCD2Q9BXW9 1451 aa29.01■■■□□ 2.23
DEF8-223ENST00000568760 CEP164Q9UPV0 1460 aa29■■■□□ 2.23
DEF8-223ENST00000568760 WDR62O43379 1518 aa28.96■■■□□ 2.23
DEF8-223ENST00000568760 TRIM41Q8WV44 630 aa28.87■■■□□ 2.21
DEF8-223ENST00000568760 CCDC88BA6NC98 1476 aa28.83■■■□□ 2.21
DEF8-223ENST00000568760 URB2Q14146 1524 aaKnown RBP28.74■■■□□ 2.19
DEF8-223ENST00000568760 OSCARQ8IYS5 282 aa28.6■■■□□ 2.17
DEF8-223ENST00000568760 PRDM2Q13029 1718 aa28.59■■■□□ 2.17
DEF8-223ENST00000568760 TOPBP1Q92547 1522 aa28.46■■■□□ 2.15
DEF8-223ENST00000568760 IFT140Q96RY7 1462 aa28.43■■■□□ 2.14
DEF8-223ENST00000568760 ABCC8Q09428 1581 aa28.42■■■□□ 2.14
DEF8-223ENST00000568760 ZNF608Q9ULD9 1512 aaPredicted RBP28.38■■■□□ 2.13
DEF8-223ENST00000568760 DNMBPQ6XZF7 1577 aa28.33■■■□□ 2.12
DEF8-223ENST00000568760 SUPT5HO00267 1087 aaKnown RBP28.25■■■□□ 2.11
DEF8-223ENST00000568760 AQRO60306 1485 aaKnown RBP eCLIP28.2■■■□□ 2.13e-6■□□□□ 10.2
DEF8-223ENST00000568760 POLA1P09884 1462 aaPredicted RBP28.17■■■□□ 2.1
DEF8-223ENST00000568760 RIMBP3CA6NJZ7 1639 aa28.17■■■□□ 2.1
DEF8-223ENST00000568760 RIMBP3BA6NNM3 1639 aa28.17■■■□□ 2.1
DEF8-223ENST00000568760 RIMBP3Q9UFD9 1639 aa28.17■■■□□ 2.1
DEF8-223ENST00000568760 TARBP1Q13395 1621 aaKnown RBP28.14■■■□□ 2.1
DEF8-223ENST00000568760 EIF4G3O43432 1585 aaKnown RBP28.14■■■□□ 2.1
DEF8-223ENST00000568760 SOGA1O94964 1423 aa28.13■■■□□ 2.09
DEF8-223ENST00000568760 RAD54L2Q9Y4B4 1467 aa28.12■■■□□ 2.09
DEF8-223ENST00000568760 FBLN2P98095 1184 aa28.09■■■□□ 2.09
DEF8-223ENST00000568760 TDRD9Q8NDG6 1382 aaKnown RBP28.07■■■□□ 2.08
DEF8-223ENST00000568760 ARHGEF11O15085 1522 aa28.06■■■□□ 2.08
DEF8-223ENST00000568760 FGD5Q6ZNL6 1462 aa28.02■■■□□ 2.08
DEF8-223ENST00000568760 CUX1P39880 1505 aa28■■■□□ 2.07
DEF8-223ENST00000568760 CHD1O14646 1710 aa27.91■■■□□ 2.06
DEF8-223ENST00000568760 CYB5RLQ6IPT4 315 aa27.88■■■□□ 2.05
DEF8-223ENST00000568760 CHMP7Q8WUX9 453 aaPredicted RBP27.88■■■□□ 2.05
DEF8-223ENST00000568760 SNAPC4Q5SXM2 1469 aa27.84■■■□□ 2.05
DEF8-223ENST00000568760 WDR97A6NE52 1622 aa27.82■■■□□ 2.04
DEF8-223ENST00000568760 GRIN2BQ13224 1484 aa27.81■■■□□ 2.04
DEF8-223ENST00000568760 MAGI1Q96QZ7 1491 aaPredicted RBP27.76■■■□□ 2.04
DEF8-223ENST00000568760 GAPVD1Q14C86 1478 aa27.75■■■□□ 2.03
DEF8-223ENST00000568760 ARAP1Q96P48 1450 aa27.72■■■□□ 2.03
DEF8-223ENST00000568760 ABCA10Q8WWZ4 1543 aa27.7■■■□□ 2.02
DEF8-223ENST00000568760 TRHP20396 242 aaPredicted RBP27.69■■■□□ 2.02
DEF8-223ENST00000568760 SYNJ2O15056 1496 aa27.69■■■□□ 2.02
DEF8-223ENST00000568760 WRNQ14191 1432 aaPredicted RBP eCLIP27.67■■■□□ 2.02
DEF8-223ENST00000568760 SYNJ1O43426 1573 aa27.64■■■□□ 2.01
DEF8-223ENST00000568760 CLASP1Q7Z460 1538 aa27.61■■■□□ 2.01
DEF8-223ENST00000568760 PBRM1Q86U86 1689 aa27.6■■■□□ 2.01
DEF8-223ENST00000568760 ABCA5Q8WWZ7 1642 aa27.58■■■□□ 2.01
DEF8-223ENST00000568760 TOP2BQ02880 1626 aa27.56■■■□□ 2
DEF8-223ENST00000568760 BIVM-ERCC5R4GMW8 1640 aa27.52■■■□□ 2
DEF8-223ENST00000568760 GRIN2AQ12879 1464 aa27.43■■□□□ 1.98
DEF8-223ENST00000568760 FHAD1B1AJZ9 1412 aa27.4■■□□□ 1.98
DEF8-223ENST00000568760 ADAMTS12P58397 1594 aa27.35■■□□□ 1.97
DEF8-223ENST00000568760 ERICH3Q5RHP9 1530 aa27.34■■□□□ 1.97
DEF8-223ENST00000568760 NUP160Q12769 1436 aa27.33■■□□□ 1.97
DEF8-223ENST00000568760 AEBP2Q6ZN18 517 aaPredicted RBP27.32■■□□□ 1.96
DEF8-223ENST00000568760 CEP170Q5SW79 1584 aa27.29■■□□□ 1.96
DEF8-223ENST00000568760 ERCC6L2Q5T890 1561 aa27.23■■□□□ 1.95
DEF8-223ENST00000568760 JPH4Q96JJ6 628 aa27.21■■□□□ 1.95
DEF8-223ENST00000568760 IGF1RP08069 1367 aa27.14■■□□□ 1.94
DEF8-223ENST00000568760 PRG4Q92954 1404 aaPredicted RBP27.13■■□□□ 1.93
DEF8-223ENST00000568760 SHROOM2Q13796 1616 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms