RNA–Protein interactions for RNA: ENST00000568717.1

PSMD7-206, Transcript of proteasome 26S subunit, non-ATPase 7, humanhuman

TSL 2

Gene PSMD7, Length 1,395 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD7-206ENST00000568717 NISCHQ9Y2I1 1504 aa47.33■■■■■ 5.17
PSMD7-206ENST00000568717 CCDC180Q9P1Z9 1646 aa42.22■■■■■ 4.35
PSMD7-206ENST00000568717 ABCC9O60706 1549 aa41.55■■■■■ 4.24
PSMD7-206ENST00000568717 RB1CC1Q8TDY2 1594 aa39.88■■■■□ 3.97
PSMD7-206ENST00000568717 DCAF8L2P0C7V8 631 aa39.77■■■■□ 3.96
PSMD7-206ENST00000568717 NACADO15069 1562 aa39.76■■■■□ 3.96
PSMD7-206ENST00000568717 MYO15BQ96JP2 1530 aa39.41■■■■□ 3.9
PSMD7-206ENST00000568717 ZCCHC6Q5VYS8 1495 aaKnown RBP39.36■■■■□ 3.89
PSMD7-206ENST00000568717 DCAF1Q9Y4B6 1507 aa39.14■■■■□ 3.86
PSMD7-206ENST00000568717 UNC13AQ9UPW8 1703 aa38.95■■■■□ 3.83
PSMD7-206ENST00000568717 PABPN1Q86U42 306 aaKnown RBP eCLIP38.79■■■■□ 3.8
PSMD7-206ENST00000568717 BICRAQ9NZM4 1560 aa38.6■■■■□ 3.77
PSMD7-206ENST00000568717 SCRIBQ14160 1630 aa38.5■■■■□ 3.75
PSMD7-206ENST00000568717 DNAJC5BQ9UF47 199 aa38.31■■■■□ 3.72
PSMD7-206ENST00000568717 SHROOM4Q9ULL8 1493 aa38.23■■■■□ 3.71
PSMD7-206ENST00000568717 EIF4G1Q04637 1599 aaKnown RBP37.65■■■■□ 3.62
PSMD7-206ENST00000568717 CC2D2AQ9P2K1 1620 aa37.56■■■■□ 3.6
PSMD7-206ENST00000568717 CECR2Q9BXF3 1484 aa37.37■■■■□ 3.57
PSMD7-206ENST00000568717 SMARCA4P51532 1647 aa36.79■■■■□ 3.48
PSMD7-206ENST00000568717 BAZ1AQ9NRL2 1556 aaPredicted RBP36.74■■■■□ 3.47
PSMD7-206ENST00000568717 NCAPD3P42695 1498 aa36.66■■■■□ 3.46
PSMD7-206ENST00000568717 ATAD2BQ9ULI0 1458 aa36.64■■■■□ 3.46
PSMD7-206ENST00000568717 SMARCA2P51531 1590 aa36.63■■■■□ 3.45
PSMD7-206ENST00000568717 HMGXB3Q12766 1538 aa36.46■■■■□ 3.43
PSMD7-206ENST00000568717 MROH2BQ7Z745 1585 aa36.46■■■■□ 3.43
PSMD7-206ENST00000568717 PEG3Q9GZU2 1588 aa36.41■■■■□ 3.42
PSMD7-206ENST00000568717 BAZ1BQ9UIG0 1483 aaKnown RBP36.37■■■■□ 3.41
PSMD7-206ENST00000568717 WIZO95785 1651 aa36.08■■■■□ 3.37
PSMD7-206ENST00000568717 RSF1Q96T23 1441 aaPredicted RBP35.96■■■■□ 3.35
PSMD7-206ENST00000568717 ERCC6Q03468 1493 aa35.89■■■■□ 3.34
PSMD7-206ENST00000568717 NESP48681 1621 aa35.85■■■■□ 3.33
PSMD7-206ENST00000568717 LAMC3Q9Y6N6 1575 aa35.77■■■■□ 3.32
PSMD7-206ENST00000568717 TOP2AP11388 1531 aaKnown RBP35.68■■■■□ 3.3
PSMD7-206ENST00000568717 CADPSQ9ULU8 1353 aa35.61■■■■□ 3.29
PSMD7-206ENST00000568717 PDS5BQ9NTI5 1447 aa35.57■■■■□ 3.28
PSMD7-206ENST00000568717 CUX2O14529 1486 aa35.56■■■■□ 3.28
PSMD7-206ENST00000568717 KIF21AQ7Z4S6 1674 aa35.45■■■■□ 3.27
PSMD7-206ENST00000568717 THOC2Q8NI27 1593 aaKnown RBP35.35■■■■□ 3.25
PSMD7-206ENST00000568717 CFTRP13569 1480 aa35.32■■■■□ 3.24
PSMD7-206ENST00000568717 CCDC88BA6NC98 1476 aa35.26■■■■□ 3.24
PSMD7-206ENST00000568717 FANCD2Q9BXW9 1451 aa35.2■■■■□ 3.22
PSMD7-206ENST00000568717 CEP164Q9UPV0 1460 aa35.19■■■■□ 3.22
PSMD7-206ENST00000568717 MRC2Q9UBG0 1479 aa35.18■■■■□ 3.22
PSMD7-206ENST00000568717 PRDM2Q13029 1718 aa35.08■■■■□ 3.21
PSMD7-206ENST00000568717 WDR62O43379 1518 aa35.04■■■■□ 3.2
PSMD7-206ENST00000568717 SUPT5HO00267 1087 aaKnown RBP34.95■■■■□ 3.19
PSMD7-206ENST00000568717 URB2Q14146 1524 aaKnown RBP34.82■■■■□ 3.17
PSMD7-206ENST00000568717 DNAJC5Q9H3Z4 198 aa34.76■■■■□ 3.16
PSMD7-206ENST00000568717 ABCC8Q09428 1581 aa34.64■■■■□ 3.14
PSMD7-206ENST00000568717 TOPBP1Q92547 1522 aa34.59■■■■□ 3.13
PSMD7-206ENST00000568717 DNMBPQ6XZF7 1577 aa34.54■■■■□ 3.12
PSMD7-206ENST00000568717 IFT140Q96RY7 1462 aa34.46■■■■□ 3.11
PSMD7-206ENST00000568717 ZNF608Q9ULD9 1512 aaPredicted RBP34.28■■■■□ 3.08
PSMD7-206ENST00000568717 POLA1P09884 1462 aaPredicted RBP34.27■■■■□ 3.08
PSMD7-206ENST00000568717 CUX1P39880 1505 aa34.22■■■■□ 3.07
PSMD7-206ENST00000568717 TARBP1Q13395 1621 aaKnown RBP34.22■■■■□ 3.07
PSMD7-206ENST00000568717 SOGA1O94964 1423 aa34.17■■■■□ 3.06
PSMD7-206ENST00000568717 FGD5Q6ZNL6 1462 aa34.17■■■■□ 3.06
PSMD7-206ENST00000568717 EIF4G3O43432 1585 aaKnown RBP34.15■■■■□ 3.06
PSMD7-206ENST00000568717 RAD54L2Q9Y4B4 1467 aa34.13■■■■□ 3.05
PSMD7-206ENST00000568717 OSCARQ8IYS5 282 aa34.09■■■■□ 3.05
PSMD7-206ENST00000568717 AQRO60306 1485 aaKnown RBP eCLIP34.08■■■■□ 3.054e-7■■■■□ 26
PSMD7-206ENST00000568717 TDRD9Q8NDG6 1382 aaKnown RBP34■■■■□ 3.03
PSMD7-206ENST00000568717 WDR97A6NE52 1622 aa33.98■■■■□ 3.03
PSMD7-206ENST00000568717 WRNQ14191 1432 aaPredicted RBP eCLIP33.95■■■■□ 3.03
PSMD7-206ENST00000568717 TOP2BQ02880 1626 aa33.89■■■■□ 3.02
PSMD7-206ENST00000568717 BIVM-ERCC5R4GMW8 1640 aa33.88■■■■□ 3.01
PSMD7-206ENST00000568717 SYNJ1O43426 1573 aa33.84■■■■□ 3.01
PSMD7-206ENST00000568717 ABCA10Q8WWZ4 1543 aa33.82■■■■□ 3.01
PSMD7-206ENST00000568717 FBLN2P98095 1184 aa33.82■■■■□ 3
PSMD7-206ENST00000568717 CHD1O14646 1710 aa33.8■■■■□ 3
PSMD7-206ENST00000568717 GRIN2BQ13224 1484 aa33.8■■■■□ 3
PSMD7-206ENST00000568717 GAPVD1Q14C86 1478 aa33.77■■■■□ 3
PSMD7-206ENST00000568717 SNAPC4Q5SXM2 1469 aa33.77■■■■□ 3
PSMD7-206ENST00000568717 MAGI1Q96QZ7 1491 aaPredicted RBP33.74■■■□□ 2.99
PSMD7-206ENST00000568717 PBRM1Q86U86 1689 aa33.72■■■□□ 2.99
PSMD7-206ENST00000568717 ABCA5Q8WWZ7 1642 aa33.69■■■□□ 2.98
PSMD7-206ENST00000568717 CHMP7Q8WUX9 453 aaPredicted RBP33.68■■■□□ 2.98
PSMD7-206ENST00000568717 SYNJ2O15056 1496 aa33.6■■■□□ 2.97
PSMD7-206ENST00000568717 TRIM41Q8WV44 630 aa33.56■■■□□ 2.96
PSMD7-206ENST00000568717 RIMBP3CA6NJZ7 1639 aa33.51■■■□□ 2.96
PSMD7-206ENST00000568717 RIMBP3BA6NNM3 1639 aa33.51■■■□□ 2.96
PSMD7-206ENST00000568717 RIMBP3Q9UFD9 1639 aa33.51■■■□□ 2.96
PSMD7-206ENST00000568717 ARHGEF11O15085 1522 aa33.47■■■□□ 2.95
PSMD7-206ENST00000568717 ERICH3Q5RHP9 1530 aa33.43■■■□□ 2.94
PSMD7-206ENST00000568717 ADAMTS12P58397 1594 aa33.4■■■□□ 2.94
PSMD7-206ENST00000568717 CLASP1Q7Z460 1538 aa33.38■■■□□ 2.93
PSMD7-206ENST00000568717 FHAD1B1AJZ9 1412 aa33.37■■■□□ 2.93
PSMD7-206ENST00000568717 GRIN2AQ12879 1464 aa33.34■■■□□ 2.93
PSMD7-206ENST00000568717 KIF27Q86VH2 1401 aa33.29■■■□□ 2.92
PSMD7-206ENST00000568717 CYB5RLQ6IPT4 315 aa33.23■■■□□ 2.91
PSMD7-206ENST00000568717 NUP160Q12769 1436 aa33.19■■■□□ 2.9
PSMD7-206ENST00000568717 CEP170Q5SW79 1584 aa33.17■■■□□ 2.9
PSMD7-206ENST00000568717 ARAP1Q96P48 1450 aa33.16■■■□□ 2.9
PSMD7-206ENST00000568717 IGF1RP08069 1367 aa33.14■■■□□ 2.9
PSMD7-206ENST00000568717 CUL7Q14999 1698 aa33.1■■■□□ 2.89
PSMD7-206ENST00000568717 CARMIL1Q5VZK9 1371 aa32.97■■■□□ 2.87
PSMD7-206ENST00000568717 SHROOM2Q13796 1616 aa32.97■■■□□ 2.87
PSMD7-206ENST00000568717 JPH4Q96JJ6 628 aa32.91■■■□□ 2.86
PSMD7-206ENST00000568717 RUSC2Q8N2Y8 1516 aa32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 210 ms