RNA–Protein interactions for RNA: ENST00000568701.1

RSRP1-219, Transcript of arginine and serine rich protein 1, humanhuman

APPRIS ALT2 TSL 4

Gene RSRP1, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSRP1-219ENST00000568701 NISCHQ9Y2I1 1504 aa42.69■■■■■ 4.42
RSRP1-219ENST00000568701 CCDC180Q9P1Z9 1646 aa38.25■■■■□ 3.71
RSRP1-219ENST00000568701 ABCC9O60706 1549 aa38.22■■■■□ 3.71
RSRP1-219ENST00000568701 RB1CC1Q8TDY2 1594 aa36.44■■■■□ 3.42
RSRP1-219ENST00000568701 NACADO15069 1562 aa36.22■■■■□ 3.39
RSRP1-219ENST00000568701 DCAF8L2P0C7V8 631 aa36.06■■■■□ 3.36
RSRP1-219ENST00000568701 DNAJC5BQ9UF47 199 aa35.84■■■■□ 3.33
RSRP1-219ENST00000568701 MYO15BQ96JP2 1530 aa35.76■■■■□ 3.31
RSRP1-219ENST00000568701 PABPN1Q86U42 306 aaKnown RBP eCLIP35.63■■■■□ 3.29
RSRP1-219ENST00000568701 UNC13AQ9UPW8 1703 aa35.48■■■■□ 3.27
RSRP1-219ENST00000568701 ZCCHC6Q5VYS8 1495 aaKnown RBP35.36■■■■□ 3.25
RSRP1-219ENST00000568701 BICRAQ9NZM4 1560 aa35.31■■■■□ 3.24
RSRP1-219ENST00000568701 DCAF1Q9Y4B6 1507 aa35.3■■■■□ 3.24
RSRP1-219ENST00000568701 SHROOM4Q9ULL8 1493 aa34.96■■■■□ 3.19
RSRP1-219ENST00000568701 SCRIBQ14160 1630 aa34.84■■■■□ 3.17
RSRP1-219ENST00000568701 CC2D2AQ9P2K1 1620 aa34.52■■■■□ 3.12
RSRP1-219ENST00000568701 EIF4G1Q04637 1599 aaKnown RBP34.47■■■■□ 3.11
RSRP1-219ENST00000568701 CECR2Q9BXF3 1484 aa34.46■■■■□ 3.11
RSRP1-219ENST00000568701 NCAPD3P42695 1498 aa33.45■■■□□ 2.95
RSRP1-219ENST00000568701 ATAD2BQ9ULI0 1458 aa33.32■■■□□ 2.92
RSRP1-219ENST00000568701 SMARCA4P51532 1647 aa33.25■■■□□ 2.91
RSRP1-219ENST00000568701 SMARCA2P51531 1590 aa33.25■■■□□ 2.91
RSRP1-219ENST00000568701 HMGXB3Q12766 1538 aa33.17■■■□□ 2.9
RSRP1-219ENST00000568701 BAZ1AQ9NRL2 1556 aaPredicted RBP33.14■■■□□ 2.9
RSRP1-219ENST00000568701 ERCC6Q03468 1493 aa33.05■■■□□ 2.88
RSRP1-219ENST00000568701 BAZ1BQ9UIG0 1483 aaKnown RBP33■■■□□ 2.87
RSRP1-219ENST00000568701 CUX2O14529 1486 aa32.99■■■□□ 2.87
RSRP1-219ENST00000568701 PEG3Q9GZU2 1588 aa32.96■■■□□ 2.87
RSRP1-219ENST00000568701 DNAJC5Q9H3Z4 198 aa32.96■■■□□ 2.87
RSRP1-219ENST00000568701 MROH2BQ7Z745 1585 aa32.86■■■□□ 2.85
RSRP1-219ENST00000568701 NESP48681 1621 aa32.83■■■□□ 2.85
RSRP1-219ENST00000568701 LAMC3Q9Y6N6 1575 aa32.66■■■□□ 2.82
RSRP1-219ENST00000568701 PDS5BQ9NTI5 1447 aa32.52■■■□□ 2.8
RSRP1-219ENST00000568701 THOC2Q8NI27 1593 aaKnown RBP32.47■■■□□ 2.79
RSRP1-219ENST00000568701 CADPSQ9ULU8 1353 aa32.45■■■□□ 2.78
RSRP1-219ENST00000568701 WIZO95785 1651 aa32.43■■■□□ 2.78
RSRP1-219ENST00000568701 KIF21AQ7Z4S6 1674 aa32.36■■■□□ 2.77
RSRP1-219ENST00000568701 RSF1Q96T23 1441 aaPredicted RBP32.24■■■□□ 2.75
RSRP1-219ENST00000568701 MRC2Q9UBG0 1479 aa32.19■■■□□ 2.74
RSRP1-219ENST00000568701 WDR62O43379 1518 aa32.08■■■□□ 2.73
RSRP1-219ENST00000568701 TOP2AP11388 1531 aaKnown RBP32.08■■■□□ 2.73
RSRP1-219ENST00000568701 CEP164Q9UPV0 1460 aa32.07■■■□□ 2.72
RSRP1-219ENST00000568701 CFTRP13569 1480 aa32.06■■■□□ 2.72
RSRP1-219ENST00000568701 FANCD2Q9BXW9 1451 aa32.04■■■□□ 2.72
RSRP1-219ENST00000568701 URB2Q14146 1524 aaKnown RBP31.75■■■□□ 2.67
RSRP1-219ENST00000568701 CCDC88BA6NC98 1476 aa31.73■■■□□ 2.67
RSRP1-219ENST00000568701 PRDM2Q13029 1718 aa31.63■■■□□ 2.65
RSRP1-219ENST00000568701 OSCARQ8IYS5 282 aa31.54■■■□□ 2.64
RSRP1-219ENST00000568701 TRIM41Q8WV44 630 aa31.48■■■□□ 2.63
RSRP1-219ENST00000568701 IFT140Q96RY7 1462 aa31.45■■■□□ 2.62
RSRP1-219ENST00000568701 ABCC8Q09428 1581 aa31.43■■■□□ 2.62
RSRP1-219ENST00000568701 TOPBP1Q92547 1522 aa31.42■■■□□ 2.62
RSRP1-219ENST00000568701 ZNF608Q9ULD9 1512 aaPredicted RBP31.34■■■□□ 2.61
RSRP1-219ENST00000568701 DNMBPQ6XZF7 1577 aa31.3■■■□□ 2.6
RSRP1-219ENST00000568701 EIF4G3O43432 1585 aaKnown RBP31.14■■■□□ 2.58
RSRP1-219ENST00000568701 TARBP1Q13395 1621 aaKnown RBP31.11■■■□□ 2.57
RSRP1-219ENST00000568701 POLA1P09884 1462 aaPredicted RBP31.1■■■□□ 2.57
RSRP1-219ENST00000568701 AQRO60306 1485 aaKnown RBP eCLIP31.08■■■□□ 2.574e-7■■■■□ 20.6
RSRP1-219ENST00000568701 SOGA1O94964 1423 aa31.01■■■□□ 2.55
RSRP1-219ENST00000568701 RIMBP3CA6NJZ7 1639 aa30.99■■■□□ 2.55
RSRP1-219ENST00000568701 RIMBP3BA6NNM3 1639 aa30.99■■■□□ 2.55
RSRP1-219ENST00000568701 RIMBP3Q9UFD9 1639 aa30.99■■■□□ 2.55
RSRP1-219ENST00000568701 RAD54L2Q9Y4B4 1467 aa30.97■■■□□ 2.55
RSRP1-219ENST00000568701 ARHGEF11O15085 1522 aa30.94■■■□□ 2.54
RSRP1-219ENST00000568701 TDRD9Q8NDG6 1382 aaKnown RBP30.92■■■□□ 2.54
RSRP1-219ENST00000568701 FBLN2P98095 1184 aa30.92■■■□□ 2.54
RSRP1-219ENST00000568701 FGD5Q6ZNL6 1462 aa30.9■■■□□ 2.54
RSRP1-219ENST00000568701 CUX1P39880 1505 aa30.88■■■□□ 2.53
RSRP1-219ENST00000568701 CHD1O14646 1710 aa30.87■■■□□ 2.53
RSRP1-219ENST00000568701 SUPT5HO00267 1087 aaKnown RBP30.86■■■□□ 2.53
RSRP1-219ENST00000568701 WDR97A6NE52 1622 aa30.86■■■□□ 2.53
RSRP1-219ENST00000568701 CYB5RLQ6IPT4 315 aa30.77■■■□□ 2.52
RSRP1-219ENST00000568701 SNAPC4Q5SXM2 1469 aa30.76■■■□□ 2.52
RSRP1-219ENST00000568701 CHMP7Q8WUX9 453 aaPredicted RBP30.73■■■□□ 2.51
RSRP1-219ENST00000568701 GRIN2BQ13224 1484 aa30.73■■■□□ 2.51
RSRP1-219ENST00000568701 MAGI1Q96QZ7 1491 aaPredicted RBP30.73■■■□□ 2.51
RSRP1-219ENST00000568701 ARAP1Q96P48 1450 aa30.63■■■□□ 2.49
RSRP1-219ENST00000568701 SYNJ2O15056 1496 aa30.62■■■□□ 2.49
RSRP1-219ENST00000568701 GAPVD1Q14C86 1478 aa30.62■■■□□ 2.49
RSRP1-219ENST00000568701 SYNJ1O43426 1573 aa30.59■■■□□ 2.49
RSRP1-219ENST00000568701 ABCA10Q8WWZ4 1543 aa30.59■■■□□ 2.49
RSRP1-219ENST00000568701 CLASP1Q7Z460 1538 aa30.57■■■□□ 2.49
RSRP1-219ENST00000568701 WRNQ14191 1432 aaPredicted RBP eCLIP30.52■■■□□ 2.48
RSRP1-219ENST00000568701 PBRM1Q86U86 1689 aa30.49■■■□□ 2.47
RSRP1-219ENST00000568701 ABCA5Q8WWZ7 1642 aa30.48■■■□□ 2.47
RSRP1-219ENST00000568701 TRHP20396 242 aaPredicted RBP30.42■■■□□ 2.46
RSRP1-219ENST00000568701 TOP2BQ02880 1626 aa30.4■■■□□ 2.46
RSRP1-219ENST00000568701 BIVM-ERCC5R4GMW8 1640 aa30.36■■■□□ 2.45
RSRP1-219ENST00000568701 GRIN2AQ12879 1464 aa30.31■■■□□ 2.44
RSRP1-219ENST00000568701 ADAMTS12P58397 1594 aa30.25■■■□□ 2.43
RSRP1-219ENST00000568701 FHAD1B1AJZ9 1412 aa30.25■■■□□ 2.43
RSRP1-219ENST00000568701 NUP160Q12769 1436 aa30.22■■■□□ 2.43
RSRP1-219ENST00000568701 ERICH3Q5RHP9 1530 aa30.21■■■□□ 2.43
RSRP1-219ENST00000568701 CEP170Q5SW79 1584 aa30.15■■■□□ 2.42
RSRP1-219ENST00000568701 ERCC6L2Q5T890 1561 aa30.07■■■□□ 2.4
RSRP1-219ENST00000568701 SHROOM2Q13796 1616 aa30.03■■■□□ 2.4
RSRP1-219ENST00000568701 JPH4Q96JJ6 628 aa29.96■■■□□ 2.39
RSRP1-219ENST00000568701 PRG4Q92954 1404 aaPredicted RBP29.93■■■□□ 2.38
RSRP1-219ENST00000568701 KIF27Q86VH2 1401 aa29.88■■■□□ 2.37
RSRP1-219ENST00000568701 IGF1RP08069 1367 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms