RNA–Protein interactions for RNA: ENST00000568692.1

TSC2-224, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 636 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-224ENST00000568692 NISCHQ9Y2I1 1504 aa25.13■■□□□ 1.61
TSC2-224ENST00000568692 CCDC180Q9P1Z9 1646 aa22.51■■□□□ 1.19
TSC2-224ENST00000568692 ABCC9O60706 1549 aa22.47■■□□□ 1.19
TSC2-224ENST00000568692 RB1CC1Q8TDY2 1594 aa21.41■■□□□ 1.02
TSC2-224ENST00000568692 NACADO15069 1562 aa21.29■■□□□ 1
TSC2-224ENST00000568692 DNAJC5BQ9UF47 199 aa21.27■■□□□ 1
TSC2-224ENST00000568692 DCAF8L2P0C7V8 631 aa21.16■□□□□ 0.98
TSC2-224ENST00000568692 MYO15BQ96JP2 1530 aa21.04■□□□□ 0.96
TSC2-224ENST00000568692 PABPN1Q86U42 306 aaKnown RBP eCLIP20.95■□□□□ 0.94
TSC2-224ENST00000568692 UNC13AQ9UPW8 1703 aa20.91■□□□□ 0.94
TSC2-224ENST00000568692 ZCCHC6Q5VYS8 1495 aaKnown RBP20.84■□□□□ 0.93
TSC2-224ENST00000568692 BICRAQ9NZM4 1560 aa20.81■□□□□ 0.92
TSC2-224ENST00000568692 DCAF1Q9Y4B6 1507 aa20.78■□□□□ 0.92
TSC2-224ENST00000568692 SHROOM4Q9ULL8 1493 aa20.54■□□□□ 0.88
TSC2-224ENST00000568692 SCRIBQ14160 1630 aa20.5■□□□□ 0.87
TSC2-224ENST00000568692 CC2D2AQ9P2K1 1620 aa20.31■□□□□ 0.84
TSC2-224ENST00000568692 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
TSC2-224ENST00000568692 CECR2Q9BXF3 1484 aa20.25■□□□□ 0.83
TSC2-224ENST00000568692 DNAJC5Q9H3Z4 198 aa19.8■□□□□ 0.76
TSC2-224ENST00000568692 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
TSC2-224ENST00000568692 ATAD2BQ9ULI0 1458 aa19.61■□□□□ 0.73
TSC2-224ENST00000568692 SMARCA4P51532 1647 aa19.58■□□□□ 0.73
TSC2-224ENST00000568692 SMARCA2P51531 1590 aa19.54■□□□□ 0.72
TSC2-224ENST00000568692 HMGXB3Q12766 1538 aa19.51■□□□□ 0.71
TSC2-224ENST00000568692 BAZ1AQ9NRL2 1556 aaPredicted RBP19.5■□□□□ 0.71
TSC2-224ENST00000568692 PEG3Q9GZU2 1588 aa19.42■□□□□ 0.7
TSC2-224ENST00000568692 BAZ1BQ9UIG0 1483 aaKnown RBP19.41■□□□□ 0.7
TSC2-224ENST00000568692 ERCC6Q03468 1493 aa19.39■□□□□ 0.69
TSC2-224ENST00000568692 CUX2O14529 1486 aa19.37■□□□□ 0.69
TSC2-224ENST00000568692 MROH2BQ7Z745 1585 aa19.36■□□□□ 0.69
TSC2-224ENST00000568692 NESP48681 1621 aa19.33■□□□□ 0.69
TSC2-224ENST00000568692 LAMC3Q9Y6N6 1575 aa19.19■□□□□ 0.66
TSC2-224ENST00000568692 THOC2Q8NI27 1593 aaKnown RBP19.12■□□□□ 0.65
TSC2-224ENST00000568692 WIZO95785 1651 aa19.11■□□□□ 0.65
TSC2-224ENST00000568692 PDS5BQ9NTI5 1447 aa19.09■□□□□ 0.65
TSC2-224ENST00000568692 CADPSQ9ULU8 1353 aa19.07■□□□□ 0.64
TSC2-224ENST00000568692 KIF21AQ7Z4S6 1674 aa19.05■□□□□ 0.64
TSC2-224ENST00000568692 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
TSC2-224ENST00000568692 MRC2Q9UBG0 1479 aa18.92■□□□□ 0.62
TSC2-224ENST00000568692 TOP2AP11388 1531 aaKnown RBP18.89■□□□□ 0.61
TSC2-224ENST00000568692 WDR62O43379 1518 aa18.88■□□□□ 0.61
TSC2-224ENST00000568692 CFTRP13569 1480 aa18.87■□□□□ 0.61
TSC2-224ENST00000568692 FANCD2Q9BXW9 1451 aa18.84■□□□□ 0.61
TSC2-224ENST00000568692 CEP164Q9UPV0 1460 aa18.84■□□□□ 0.61
TSC2-224ENST00000568692 TRIM41Q8WV44 630 aa18.7■□□□□ 0.58
TSC2-224ENST00000568692 URB2Q14146 1524 aaKnown RBP18.69■□□□□ 0.58
TSC2-224ENST00000568692 CCDC88BA6NC98 1476 aa18.69■□□□□ 0.58
TSC2-224ENST00000568692 PRDM2Q13029 1718 aa18.63■□□□□ 0.57
TSC2-224ENST00000568692 OSCARQ8IYS5 282 aa18.5■□□□□ 0.55
TSC2-224ENST00000568692 TOPBP1Q92547 1522 aa18.49■□□□□ 0.55
TSC2-224ENST00000568692 IFT140Q96RY7 1462 aa18.48■□□□□ 0.55
TSC2-224ENST00000568692 ABCC8Q09428 1581 aa18.46■□□□□ 0.55
TSC2-224ENST00000568692 ZNF608Q9ULD9 1512 aaPredicted RBP18.45■□□□□ 0.54
TSC2-224ENST00000568692 DNMBPQ6XZF7 1577 aa18.42■□□□□ 0.54
TSC2-224ENST00000568692 EIF4G3O43432 1585 aaKnown RBP18.33■□□□□ 0.52
TSC2-224ENST00000568692 TARBP1Q13395 1621 aaKnown RBP18.32■□□□□ 0.52
TSC2-224ENST00000568692 POLA1P09884 1462 aaPredicted RBP18.31■□□□□ 0.52
TSC2-224ENST00000568692 AQRO60306 1485 aaKnown RBP eCLIP18.29■□□□□ 0.52
TSC2-224ENST00000568692 RAD54L2Q9Y4B4 1467 aa18.24■□□□□ 0.51
TSC2-224ENST00000568692 RIMBP3CA6NJZ7 1639 aa18.23■□□□□ 0.51
TSC2-224ENST00000568692 RIMBP3BA6NNM3 1639 aa18.23■□□□□ 0.51
TSC2-224ENST00000568692 RIMBP3Q9UFD9 1639 aa18.23■□□□□ 0.51
TSC2-224ENST00000568692 SOGA1O94964 1423 aa18.23■□□□□ 0.51
TSC2-224ENST00000568692 ARHGEF11O15085 1522 aa18.19■□□□□ 0.5
TSC2-224ENST00000568692 FGD5Q6ZNL6 1462 aa18.19■□□□□ 0.5
TSC2-224ENST00000568692 CUX1P39880 1505 aa18.18■□□□□ 0.5
TSC2-224ENST00000568692 TDRD9Q8NDG6 1382 aaKnown RBP18.18■□□□□ 0.5
TSC2-224ENST00000568692 CHD1O14646 1710 aa18.17■□□□□ 0.5
TSC2-224ENST00000568692 WDR97A6NE52 1622 aa18.14■□□□□ 0.49
TSC2-224ENST00000568692 SUPT5HO00267 1087 aaKnown RBP18.14■□□□□ 0.49
TSC2-224ENST00000568692 FBLN2P98095 1184 aa18.13■□□□□ 0.49
TSC2-224ENST00000568692 SNAPC4Q5SXM2 1469 aa18.09■□□□□ 0.49
TSC2-224ENST00000568692 GRIN2BQ13224 1484 aa18.06■□□□□ 0.48
TSC2-224ENST00000568692 MAGI1Q96QZ7 1491 aaPredicted RBP18.06■□□□□ 0.48
TSC2-224ENST00000568692 CYB5RLQ6IPT4 315 aa18.05■□□□□ 0.48
TSC2-224ENST00000568692 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
TSC2-224ENST00000568692 ARAP1Q96P48 1450 aa18.02■□□□□ 0.48
TSC2-224ENST00000568692 CLASP1Q7Z460 1538 aa18■□□□□ 0.47
TSC2-224ENST00000568692 ABCA10Q8WWZ4 1543 aa18■□□□□ 0.47
TSC2-224ENST00000568692 SYNJ2O15056 1496 aa18■□□□□ 0.47
TSC2-224ENST00000568692 GAPVD1Q14C86 1478 aa18■□□□□ 0.47
TSC2-224ENST00000568692 SYNJ1O43426 1573 aa17.97■□□□□ 0.47
TSC2-224ENST00000568692 PBRM1Q86U86 1689 aa17.96■□□□□ 0.47
TSC2-224ENST00000568692 ABCA5Q8WWZ7 1642 aa17.95■□□□□ 0.46
TSC2-224ENST00000568692 WRNQ14191 1432 aaPredicted RBP eCLIP17.93■□□□□ 0.46
TSC2-224ENST00000568692 TOP2BQ02880 1626 aa17.9■□□□□ 0.46
TSC2-224ENST00000568692 BIVM-ERCC5R4GMW8 1640 aa17.9■□□□□ 0.46
TSC2-224ENST00000568692 GRIN2AQ12879 1464 aa17.82■□□□□ 0.44
TSC2-224ENST00000568692 TRHP20396 242 aaPredicted RBP17.82■□□□□ 0.44
TSC2-224ENST00000568692 ADAMTS12P58397 1594 aa17.81■□□□□ 0.44
TSC2-224ENST00000568692 NUP160Q12769 1436 aa17.79■□□□□ 0.44
TSC2-224ENST00000568692 FHAD1B1AJZ9 1412 aa17.78■□□□□ 0.44
TSC2-224ENST00000568692 ERICH3Q5RHP9 1530 aa17.77■□□□□ 0.43
TSC2-224ENST00000568692 CEP170Q5SW79 1584 aa17.75■□□□□ 0.43
TSC2-224ENST00000568692 ERCC6L2Q5T890 1561 aa17.71■□□□□ 0.43
TSC2-224ENST00000568692 SHROOM2Q13796 1616 aa17.69■□□□□ 0.42
TSC2-224ENST00000568692 JPH4Q96JJ6 628 aa17.6■□□□□ 0.41
TSC2-224ENST00000568692 PRG4Q92954 1404 aaPredicted RBP17.59■□□□□ 0.41
TSC2-224ENST00000568692 IGF1RP08069 1367 aa17.57■□□□□ 0.4
TSC2-224ENST00000568692 RUSC2Q8N2Y8 1516 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms