RNA–Protein interactions for RNA: ENST00000568669.1

HMGN2P46-207, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, humanhuman

TSL 3 BASIC

Gene HMGN2P46, Length 388 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P46-207ENST00000568669 AEBP2Q6ZN18 517 aaPredicted RBP21.44■■□□□ 1.02
HMGN2P46-207ENST00000568669 CHIC1Q5VXU3 224 aa21.03■□□□□ 0.96
HMGN2P46-207ENST00000568669 NISCHQ9Y2I1 1504 aa20.82■□□□□ 0.92
HMGN2P46-207ENST00000568669 CCDC180Q9P1Z9 1646 aa18.43■□□□□ 0.54
HMGN2P46-207ENST00000568669 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
HMGN2P46-207ENST00000568669 SENP3Q9H4L4 574 aaPredicted RBP18.33■□□□□ 0.52
HMGN2P46-207ENST00000568669 ABCC9O60706 1549 aa17.99■□□□□ 0.47
HMGN2P46-207ENST00000568669 DCAF8L2P0C7V8 631 aa17.58■□□□□ 0.4
HMGN2P46-207ENST00000568669 RB1CC1Q8TDY2 1594 aa17.37■□□□□ 0.37
HMGN2P46-207ENST00000568669 NACADO15069 1562 aa17.36■□□□□ 0.37
HMGN2P46-207ENST00000568669 ZCCHC6Q5VYS8 1495 aaKnown RBP17.33■□□□□ 0.37
HMGN2P46-207ENST00000568669 MYO15BQ96JP2 1530 aa17.26■□□□□ 0.35
HMGN2P46-207ENST00000568669 DCAF1Q9Y4B6 1507 aa17.22■□□□□ 0.35
HMGN2P46-207ENST00000568669 PLPPR3Q6T4P5 718 aa17.14■□□□□ 0.33
HMGN2P46-207ENST00000568669 FOXD1Q16676 465 aa16.92■□□□□ 0.3
HMGN2P46-207ENST00000568669 PABPN1Q86U42 306 aaKnown RBP eCLIP16.89■□□□□ 0.29
HMGN2P46-207ENST00000568669 SCRIBQ14160 1630 aa16.85■□□□□ 0.29
HMGN2P46-207ENST00000568669 UNC13AQ9UPW8 1703 aa16.8■□□□□ 0.28
HMGN2P46-207ENST00000568669 BICRAQ9NZM4 1560 aa16.71■□□□□ 0.27
HMGN2P46-207ENST00000568669 SHROOM4Q9ULL8 1493 aa16.65■□□□□ 0.26
HMGN2P46-207ENST00000568669 DNAJC5BQ9UF47 199 aa16.36■□□□□ 0.21
HMGN2P46-207ENST00000568669 EIF4G1Q04637 1599 aaKnown RBP16.33■□□□□ 0.2
HMGN2P46-207ENST00000568669 ADRA2BP18089 450 aa16.27■□□□□ 0.2
HMGN2P46-207ENST00000568669 PPP6R1Q9UPN7 881 aa16.25■□□□□ 0.19
HMGN2P46-207ENST00000568669 CC2D2AQ9P2K1 1620 aa16.23■□□□□ 0.19
HMGN2P46-207ENST00000568669 CECR2Q9BXF3 1484 aa16.17■□□□□ 0.18
HMGN2P46-207ENST00000568669 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
HMGN2P46-207ENST00000568669 SMARCA4P51532 1647 aa16.11■□□□□ 0.17
HMGN2P46-207ENST00000568669 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
HMGN2P46-207ENST00000568669 MROH2BQ7Z745 1585 aa16.02■□□□□ 0.16
HMGN2P46-207ENST00000568669 NCAPD3P42695 1498 aa16.02■□□□□ 0.15
HMGN2P46-207ENST00000568669 ATAD2BQ9ULI0 1458 aa16.02■□□□□ 0.15
HMGN2P46-207ENST00000568669 PIAS4Q8N2W9 510 aaPredicted RBP16.01■□□□□ 0.15
HMGN2P46-207ENST00000568669 BAZ1BQ9UIG0 1483 aaKnown RBP15.95■□□□□ 0.14
HMGN2P46-207ENST00000568669 PEG3Q9GZU2 1588 aa15.92■□□□□ 0.14
HMGN2P46-207ENST00000568669 RSF1Q96T23 1441 aaPredicted RBP15.92■□□□□ 0.14
HMGN2P46-207ENST00000568669 HMGXB3Q12766 1538 aa15.91■□□□□ 0.14
HMGN2P46-207ENST00000568669 WIZO95785 1651 aa15.85■□□□□ 0.13
HMGN2P46-207ENST00000568669 SUPT5HO00267 1087 aaKnown RBP15.75■□□□□ 0.11
HMGN2P46-207ENST00000568669 TOP2AP11388 1531 aaKnown RBP15.72■□□□□ 0.11
HMGN2P46-207ENST00000568669 MSH5O43196 834 aa15.71■□□□□ 0.11
HMGN2P46-207ENST00000568669 CADPSQ9ULU8 1353 aa15.6■□□□□ 0.09
HMGN2P46-207ENST00000568669 ERCC6Q03468 1493 aa15.58■□□□□ 0.08
HMGN2P46-207ENST00000568669 LAMC3Q9Y6N6 1575 aa15.58■□□□□ 0.08
HMGN2P46-207ENST00000568669 CCDC88BA6NC98 1476 aa15.56■□□□□ 0.08
HMGN2P46-207ENST00000568669 PDS5BQ9NTI5 1447 aa15.55■□□□□ 0.08
HMGN2P46-207ENST00000568669 NESP48681 1621 aa15.54■□□□□ 0.08
HMGN2P46-207ENST00000568669 CFTRP13569 1480 aa15.47■□□□□ 0.07
HMGN2P46-207ENST00000568669 FANCD2Q9BXW9 1451 aa15.4■□□□□ 0.06
HMGN2P46-207ENST00000568669 CEP164Q9UPV0 1460 aa15.38■□□□□ 0.05
HMGN2P46-207ENST00000568669 KIF21AQ7Z4S6 1674 aa15.33■□□□□ 0.04
HMGN2P46-207ENST00000568669 MRC2Q9UBG0 1479 aa15.32■□□□□ 0.04
HMGN2P46-207ENST00000568669 CUX2O14529 1486 aa15.31■□□□□ 0.04
HMGN2P46-207ENST00000568669 PRDM2Q13029 1718 aa15.29■□□□□ 0.04
HMGN2P46-207ENST00000568669 ABCC8Q09428 1581 aa15.24■□□□□ 0.03
HMGN2P46-207ENST00000568669 THOC2Q8NI27 1593 aaKnown RBP15.24■□□□□ 0.03
HMGN2P46-207ENST00000568669 WDR62O43379 1518 aa15.2■□□□□ 0.02
HMGN2P46-207ENST00000568669 URB2Q14146 1524 aaKnown RBP15.17■□□□□ 0.02
HMGN2P46-207ENST00000568669 TOPBP1Q92547 1522 aa15.12■□□□□ 0.01
HMGN2P46-207ENST00000568669 DNMBPQ6XZF7 1577 aa15.12■□□□□ 0.01
HMGN2P46-207ENST00000568669 IFT140Q96RY7 1462 aa15.06■□□□□ 0
HMGN2P46-207ENST00000568669 PPP4R3CPQ6ZMV5 832 aa15.05■□□□□ -0
HMGN2P46-207ENST00000568669 WRNQ14191 1432 aaPredicted RBP eCLIP15.05■□□□□ -0
HMGN2P46-207ENST00000568669 SCAF1Q9H7N4 1312 aaKnown RBP15.04■□□□□ -0
HMGN2P46-207ENST00000568669 SOGA1O94964 1423 aa15.03■□□□□ -0
HMGN2P46-207ENST00000568669 CUX1P39880 1505 aa15.02■□□□□ -0
HMGN2P46-207ENST00000568669 POLA1P09884 1462 aaPredicted RBP15□□□□□ -0.01
HMGN2P46-207ENST00000568669 FGD5Q6ZNL6 1462 aa15□□□□□ -0.01
HMGN2P46-207ENST00000568669 RAD54L2Q9Y4B4 1467 aa14.95□□□□□ -0.02
HMGN2P46-207ENST00000568669 TOP2BQ02880 1626 aa14.94□□□□□ -0.02
HMGN2P46-207ENST00000568669 SYNJ1O43426 1573 aa14.91□□□□□ -0.02
HMGN2P46-207ENST00000568669 TDRD9Q8NDG6 1382 aaKnown RBP14.91□□□□□ -0.02
HMGN2P46-207ENST00000568669 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
HMGN2P46-207ENST00000568669 BIVM-ERCC5R4GMW8 1640 aa14.91□□□□□ -0.02
HMGN2P46-207ENST00000568669 TARBP1Q13395 1621 aaKnown RBP14.9□□□□□ -0.02
HMGN2P46-207ENST00000568669 ZNF608Q9ULD9 1512 aaPredicted RBP14.9□□□□□ -0.02
HMGN2P46-207ENST00000568669 AQRO60306 1485 aaKnown RBP eCLIP14.89□□□□□ -0.03
HMGN2P46-207ENST00000568669 WDR97A6NE52 1622 aa14.86□□□□□ -0.03
HMGN2P46-207ENST00000568669 ABCA10Q8WWZ4 1543 aa14.85□□□□□ -0.03
HMGN2P46-207ENST00000568669 FBLN2P98095 1184 aa14.84□□□□□ -0.03
HMGN2P46-207ENST00000568669 EIF4G3O43432 1585 aaKnown RBP14.84□□□□□ -0.03
HMGN2P46-207ENST00000568669 GAPVD1Q14C86 1478 aa14.82□□□□□ -0.04
HMGN2P46-207ENST00000568669 GRIN2BQ13224 1484 aa14.82□□□□□ -0.04
HMGN2P46-207ENST00000568669 OSCARQ8IYS5 282 aa14.81□□□□□ -0.04
HMGN2P46-207ENST00000568669 CHMP7Q8WUX9 453 aaPredicted RBP14.81□□□□□ -0.04
HMGN2P46-207ENST00000568669 KIF27Q86VH2 1401 aa14.78□□□□□ -0.04
HMGN2P46-207ENST00000568669 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
HMGN2P46-207ENST00000568669 DNAJC5Q9H3Z4 198 aa14.75□□□□□ -0.05
HMGN2P46-207ENST00000568669 MAGI1Q96QZ7 1491 aaPredicted RBP14.75□□□□□ -0.05
HMGN2P46-207ENST00000568669 MAPK8IP2Q13387 824 aaPredicted RBP14.74□□□□□ -0.05
HMGN2P46-207ENST00000568669 SNAPC4Q5SXM2 1469 aa14.74□□□□□ -0.05
HMGN2P46-207ENST00000568669 ABCA5Q8WWZ7 1642 aa14.72□□□□□ -0.05
HMGN2P46-207ENST00000568669 ERICH3Q5RHP9 1530 aa14.7□□□□□ -0.06
HMGN2P46-207ENST00000568669 PBRM1Q86U86 1689 aa14.69□□□□□ -0.06
HMGN2P46-207ENST00000568669 SYNJ2O15056 1496 aa14.69□□□□□ -0.06
HMGN2P46-207ENST00000568669 FHAD1B1AJZ9 1412 aa14.67□□□□□ -0.06
HMGN2P46-207ENST00000568669 KCNA4P22459 653 aa14.67□□□□□ -0.06
HMGN2P46-207ENST00000568669 CNKSR2Q8WXI2 1034 aa14.67□□□□□ -0.06
HMGN2P46-207ENST00000568669 IGF1RP08069 1367 aa14.65□□□□□ -0.06
HMGN2P46-207ENST00000568669 CHD1O14646 1710 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms