RNA–Protein interactions for RNA: ENST00000568653.7

RPGRIP1L-210, Transcript of RPGRIP1 like, humanhuman

TSL 1 (best) BASIC

Gene RPGRIP1L, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1L-210ENST00000568653 NISCHQ9Y2I1 1504 aa20.2■□□□□ 0.82
RPGRIP1L-210ENST00000568653 CCDC180Q9P1Z9 1646 aa18.04■□□□□ 0.48
RPGRIP1L-210ENST00000568653 CHIC1Q5VXU3 224 aa17.64■□□□□ 0.42
RPGRIP1L-210ENST00000568653 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
RPGRIP1L-210ENST00000568653 ABCC9O60706 1549 aa17.28■□□□□ 0.36
RPGRIP1L-210ENST00000568653 ZCCHC6Q5VYS8 1495 aaKnown RBP16.89■□□□□ 0.29
RPGRIP1L-210ENST00000568653 NACADO15069 1562 aa16.85■□□□□ 0.29
RPGRIP1L-210ENST00000568653 MYO15BQ96JP2 1530 aa16.85■□□□□ 0.29
RPGRIP1L-210ENST00000568653 RB1CC1Q8TDY2 1594 aa16.83■□□□□ 0.28
RPGRIP1L-210ENST00000568653 DCAF1Q9Y4B6 1507 aa16.82■□□□□ 0.28
RPGRIP1L-210ENST00000568653 DCAF8L2P0C7V8 631 aa16.55■□□□□ 0.24
RPGRIP1L-210ENST00000568653 UNC13AQ9UPW8 1703 aa16.48■□□□□ 0.23
RPGRIP1L-210ENST00000568653 SCRIBQ14160 1630 aa16.32■□□□□ 0.2
RPGRIP1L-210ENST00000568653 BICRAQ9NZM4 1560 aa16.29■□□□□ 0.2
RPGRIP1L-210ENST00000568653 SHROOM4Q9ULL8 1493 aa16.24■□□□□ 0.19
RPGRIP1L-210ENST00000568653 PELP1Q8IZL8 1130 aaKnown RBP16.21■□□□□ 0.19
RPGRIP1L-210ENST00000568653 MYT1Q01538 1121 aa16.09■□□□□ 0.17
RPGRIP1L-210ENST00000568653 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.16
RPGRIP1L-210ENST00000568653 EIF4G1Q04637 1599 aaKnown RBP15.83■□□□□ 0.13
RPGRIP1L-210ENST00000568653 CC2D2AQ9P2K1 1620 aa15.73■□□□□ 0.11
RPGRIP1L-210ENST00000568653 PHF23Q9BUL5 403 aaPredicted RBP15.71■□□□□ 0.11
RPGRIP1L-210ENST00000568653 SMARCA4P51532 1647 aa15.68■□□□□ 0.1
RPGRIP1L-210ENST00000568653 BAZ1AQ9NRL2 1556 aaPredicted RBP15.68■□□□□ 0.1
RPGRIP1L-210ENST00000568653 CECR2Q9BXF3 1484 aa15.65■□□□□ 0.1
RPGRIP1L-210ENST00000568653 DNAJC5BQ9UF47 199 aa15.64■□□□□ 0.09
RPGRIP1L-210ENST00000568653 TTBK1Q5TCY1 1321 aaPredicted RBP15.6■□□□□ 0.09
RPGRIP1L-210ENST00000568653 PEG3Q9GZU2 1588 aa15.57■□□□□ 0.08
RPGRIP1L-210ENST00000568653 SMARCA2P51531 1590 aa15.55■□□□□ 0.08
RPGRIP1L-210ENST00000568653 MROH2BQ7Z745 1585 aa15.54■□□□□ 0.08
RPGRIP1L-210ENST00000568653 ATAD2BQ9ULI0 1458 aa15.51■□□□□ 0.07
RPGRIP1L-210ENST00000568653 HMGXB3Q12766 1538 aa15.5■□□□□ 0.07
RPGRIP1L-210ENST00000568653 NCAPD3P42695 1498 aa15.5■□□□□ 0.07
RPGRIP1L-210ENST00000568653 WIZO95785 1651 aa15.4■□□□□ 0.06
RPGRIP1L-210ENST00000568653 RSF1Q96T23 1441 aaPredicted RBP15.39■□□□□ 0.05
RPGRIP1L-210ENST00000568653 BAZ1BQ9UIG0 1483 aaKnown RBP15.39■□□□□ 0.05
RPGRIP1L-210ENST00000568653 TOP2AP11388 1531 aaKnown RBP15.3■□□□□ 0.04
RPGRIP1L-210ENST00000568653 LAMC3Q9Y6N6 1575 aa15.11■□□□□ 0.01
RPGRIP1L-210ENST00000568653 PRKCSHP14314 528 aaPredicted RBP15.11■□□□□ 0.01
RPGRIP1L-210ENST00000568653 SLC24A1O60721 1099 aa15.08■□□□□ 0.01
RPGRIP1L-210ENST00000568653 PRDM2Q13029 1718 aa15.05■□□□□ -0
RPGRIP1L-210ENST00000568653 CCDC88BA6NC98 1476 aa15.03■□□□□ -0
RPGRIP1L-210ENST00000568653 CADPSQ9ULU8 1353 aa15□□□□□ -0.01
RPGRIP1L-210ENST00000568653 NESP48681 1621 aa15□□□□□ -0.01
RPGRIP1L-210ENST00000568653 CFTRP13569 1480 aa14.98□□□□□ -0.01
RPGRIP1L-210ENST00000568653 KIF21AQ7Z4S6 1674 aa14.94□□□□□ -0.02
RPGRIP1L-210ENST00000568653 SUPT5HO00267 1087 aaKnown RBP14.94□□□□□ -0.02
RPGRIP1L-210ENST00000568653 PDS5BQ9NTI5 1447 aa14.93□□□□□ -0.02
RPGRIP1L-210ENST00000568653 ERCC6Q03468 1493 aa14.91□□□□□ -0.02
RPGRIP1L-210ENST00000568653 ERICH6Q7L0X2 663 aa14.91□□□□□ -0.02
RPGRIP1L-210ENST00000568653 APLP2Q06481 763 aa14.89□□□□□ -0.03
RPGRIP1L-210ENST00000568653 THOC2Q8NI27 1593 aaKnown RBP14.88□□□□□ -0.03
RPGRIP1L-210ENST00000568653 FANCD2Q9BXW9 1451 aa14.85□□□□□ -0.03
RPGRIP1L-210ENST00000568653 CEP164Q9UPV0 1460 aa14.84□□□□□ -0.03
RPGRIP1L-210ENST00000568653 MRC2Q9UBG0 1479 aa14.81□□□□□ -0.04
RPGRIP1L-210ENST00000568653 CUX2O14529 1486 aa14.79□□□□□ -0.04
RPGRIP1L-210ENST00000568653 WDR62O43379 1518 aa14.79□□□□□ -0.04
RPGRIP1L-210ENST00000568653 ABCC8Q09428 1581 aa14.7□□□□□ -0.06
RPGRIP1L-210ENST00000568653 URB2Q14146 1524 aaKnown RBP14.7□□□□□ -0.06
RPGRIP1L-210ENST00000568653 DNMBPQ6XZF7 1577 aa14.69□□□□□ -0.06
RPGRIP1L-210ENST00000568653 PLPPR3Q6T4P5 718 aa14.65□□□□□ -0.06
RPGRIP1L-210ENST00000568653 TOPBP1Q92547 1522 aa14.65□□□□□ -0.06
RPGRIP1L-210ENST00000568653 BIVM-ERCC5R4GMW8 1640 aa14.59□□□□□ -0.07
RPGRIP1L-210ENST00000568653 CUX1P39880 1505 aa14.59□□□□□ -0.07
RPGRIP1L-210ENST00000568653 BCL11AQ9H165 835 aa14.56□□□□□ -0.08
RPGRIP1L-210ENST00000568653 TOP2BQ02880 1626 aa14.55□□□□□ -0.08
RPGRIP1L-210ENST00000568653 IFT140Q96RY7 1462 aa14.54□□□□□ -0.08
RPGRIP1L-210ENST00000568653 HRCP23327 699 aa14.53□□□□□ -0.08
RPGRIP1L-210ENST00000568653 TARBP1Q13395 1621 aaKnown RBP14.52□□□□□ -0.08
RPGRIP1L-210ENST00000568653 POLA1P09884 1462 aaPredicted RBP14.52□□□□□ -0.08
RPGRIP1L-210ENST00000568653 WRNQ14191 1432 aaPredicted RBP eCLIP14.52□□□□□ -0.09
RPGRIP1L-210ENST00000568653 SYNJ1O43426 1573 aa14.51□□□□□ -0.09
RPGRIP1L-210ENST00000568653 WDR97A6NE52 1622 aa14.51□□□□□ -0.09
RPGRIP1L-210ENST00000568653 FGD5Q6ZNL6 1462 aa14.5□□□□□ -0.09
RPGRIP1L-210ENST00000568653 SENP3Q9H4L4 574 aaPredicted RBP14.45□□□□□ -0.1
RPGRIP1L-210ENST00000568653 EIF4G3O43432 1585 aaKnown RBP14.43□□□□□ -0.1
RPGRIP1L-210ENST00000568653 SOGA1O94964 1423 aa14.42□□□□□ -0.1
RPGRIP1L-210ENST00000568653 DAXXQ9UER7 740 aaPredicted RBP14.41□□□□□ -0.1
RPGRIP1L-210ENST00000568653 ABCA10Q8WWZ4 1543 aa14.41□□□□□ -0.1
RPGRIP1L-210ENST00000568653 RAD54L2Q9Y4B4 1467 aa14.4□□□□□ -0.1
RPGRIP1L-210ENST00000568653 SCAF1Q9H7N4 1312 aaKnown RBP14.39□□□□□ -0.11
RPGRIP1L-210ENST00000568653 ABCA5Q8WWZ7 1642 aa14.38□□□□□ -0.11
RPGRIP1L-210ENST00000568653 ZNF608Q9ULD9 1512 aaPredicted RBP14.38□□□□□ -0.11
RPGRIP1L-210ENST00000568653 PBRM1Q86U86 1689 aa14.36□□□□□ -0.11
RPGRIP1L-210ENST00000568653 FAM9AQ8IZU1 332 aaPredicted RBP14.33□□□□□ -0.12
RPGRIP1L-210ENST00000568653 AQRO60306 1485 aaKnown RBP eCLIP14.29□□□□□ -0.12
RPGRIP1L-210ENST00000568653 GRIN2BQ13224 1484 aa14.29□□□□□ -0.12
RPGRIP1L-210ENST00000568653 GAPVD1Q14C86 1478 aa14.28□□□□□ -0.12
RPGRIP1L-210ENST00000568653 MAGI1Q96QZ7 1491 aaPredicted RBP14.27□□□□□ -0.13
RPGRIP1L-210ENST00000568653 TDRD9Q8NDG6 1382 aaKnown RBP14.27□□□□□ -0.13
RPGRIP1L-210ENST00000568653 ERICH3Q5RHP9 1530 aa14.26□□□□□ -0.13
RPGRIP1L-210ENST00000568653 CHD1O14646 1710 aa14.24□□□□□ -0.13
RPGRIP1L-210ENST00000568653 SNAPC4Q5SXM2 1469 aa14.23□□□□□ -0.13
RPGRIP1L-210ENST00000568653 ADAMTS12P58397 1594 aa14.22□□□□□ -0.13
RPGRIP1L-210ENST00000568653 KIF27Q86VH2 1401 aa14.21□□□□□ -0.13
RPGRIP1L-210ENST00000568653 CUL7Q14999 1698 aa14.2□□□□□ -0.14
RPGRIP1L-210ENST00000568653 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
RPGRIP1L-210ENST00000568653 TRIM41Q8WV44 630 aa14.16□□□□□ -0.14
RPGRIP1L-210ENST00000568653 FHAD1B1AJZ9 1412 aa14.15□□□□□ -0.14
RPGRIP1L-210ENST00000568653 GRIN2AQ12879 1464 aa14.11□□□□□ -0.15
RPGRIP1L-210ENST00000568653 IGF1RP08069 1367 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms