RNA–Protein interactions for RNA: ENST00000568615.2

PSMD7-205, Transcript of proteasome 26S subunit, non-ATPase 7, humanhuman

TSL 2 BASIC

Gene PSMD7, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD7-205ENST00000568615 NISCHQ9Y2I1 1504 aa30.31■■■□□ 2.44
PSMD7-205ENST00000568615 CCDC180Q9P1Z9 1646 aa26.76■■□□□ 1.87
PSMD7-205ENST00000568615 ABCC9O60706 1549 aa26.29■■□□□ 1.8
PSMD7-205ENST00000568615 ZCCHC6Q5VYS8 1495 aaKnown RBP25.29■■□□□ 1.64
PSMD7-205ENST00000568615 DCAF8L2P0C7V8 631 aa25.24■■□□□ 1.63
PSMD7-205ENST00000568615 NACADO15069 1562 aa25.19■■□□□ 1.62
PSMD7-205ENST00000568615 MYO15BQ96JP2 1530 aa25.16■■□□□ 1.62
PSMD7-205ENST00000568615 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.62
PSMD7-205ENST00000568615 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
PSMD7-205ENST00000568615 DNAJC5BQ9UF47 199 aa24.73■■□□□ 1.55
PSMD7-205ENST00000568615 SCRIBQ14160 1630 aa24.44■■□□□ 1.5
PSMD7-205ENST00000568615 UNC13AQ9UPW8 1703 aa24.44■■□□□ 1.5
PSMD7-205ENST00000568615 PABPN1Q86U42 306 aaKnown RBP eCLIP24.43■■□□□ 1.5
PSMD7-205ENST00000568615 BICRAQ9NZM4 1560 aa24.37■■□□□ 1.49
PSMD7-205ENST00000568615 SHROOM4Q9ULL8 1493 aa24.2■■□□□ 1.47
PSMD7-205ENST00000568615 CC2D2AQ9P2K1 1620 aa23.73■■□□□ 1.39
PSMD7-205ENST00000568615 EIF4G1Q04637 1599 aaKnown RBP23.71■■□□□ 1.39
PSMD7-205ENST00000568615 CECR2Q9BXF3 1484 aa23.67■■□□□ 1.38
PSMD7-205ENST00000568615 BAZ1AQ9NRL2 1556 aaPredicted RBP23.46■■□□□ 1.35
PSMD7-205ENST00000568615 SMARCA4P51532 1647 aa23.42■■□□□ 1.34
PSMD7-205ENST00000568615 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
PSMD7-205ENST00000568615 ATAD2BQ9ULI0 1458 aa23.31■■□□□ 1.32
PSMD7-205ENST00000568615 NCAPD3P42695 1498 aa23.3■■□□□ 1.32
PSMD7-205ENST00000568615 SMARCA2P51531 1590 aa23.27■■□□□ 1.32
PSMD7-205ENST00000568615 PEG3Q9GZU2 1588 aa23.23■■□□□ 1.31
PSMD7-205ENST00000568615 RSF1Q96T23 1441 aaPredicted RBP23.2■■□□□ 1.3
PSMD7-205ENST00000568615 HMGXB3Q12766 1538 aa23.14■■□□□ 1.3
PSMD7-205ENST00000568615 BAZ1BQ9UIG0 1483 aaKnown RBP23.11■■□□□ 1.29
PSMD7-205ENST00000568615 WIZO95785 1651 aa23.03■■□□□ 1.28
PSMD7-205ENST00000568615 TOP2AP11388 1531 aaKnown RBP22.87■■□□□ 1.25
PSMD7-205ENST00000568615 DNAJC5Q9H3Z4 198 aa22.76■■□□□ 1.23
PSMD7-205ENST00000568615 SUPT5HO00267 1087 aaKnown RBP22.74■■□□□ 1.23
PSMD7-205ENST00000568615 ERCC6Q03468 1493 aa22.69■■□□□ 1.22
PSMD7-205ENST00000568615 CUX2O14529 1486 aa22.66■■□□□ 1.22
PSMD7-205ENST00000568615 CCDC88BA6NC98 1476 aa22.63■■□□□ 1.21
PSMD7-205ENST00000568615 CADPSQ9ULU8 1353 aa22.63■■□□□ 1.21
PSMD7-205ENST00000568615 NESP48681 1621 aa22.6■■□□□ 1.21
PSMD7-205ENST00000568615 LAMC3Q9Y6N6 1575 aa22.57■■□□□ 1.2
PSMD7-205ENST00000568615 CFTRP13569 1480 aa22.53■■□□□ 1.2
PSMD7-205ENST00000568615 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
PSMD7-205ENST00000568615 THOC2Q8NI27 1593 aaKnown RBP22.36■■□□□ 1.17
PSMD7-205ENST00000568615 FANCD2Q9BXW9 1451 aa22.33■■□□□ 1.16
PSMD7-205ENST00000568615 KIF21AQ7Z4S6 1674 aa22.29■■□□□ 1.16
PSMD7-205ENST00000568615 CEP164Q9UPV0 1460 aa22.27■■□□□ 1.16
PSMD7-205ENST00000568615 MRC2Q9UBG0 1479 aa22.2■■□□□ 1.14
PSMD7-205ENST00000568615 PRDM2Q13029 1718 aa22.16■■□□□ 1.14
PSMD7-205ENST00000568615 WDR62O43379 1518 aa22.11■■□□□ 1.13
PSMD7-205ENST00000568615 URB2Q14146 1524 aaKnown RBP22.08■■□□□ 1.13
PSMD7-205ENST00000568615 ABCC8Q09428 1581 aa22.02■■□□□ 1.12
PSMD7-205ENST00000568615 TOPBP1Q92547 1522 aa21.98■■□□□ 1.11
PSMD7-205ENST00000568615 DNMBPQ6XZF7 1577 aa21.95■■□□□ 1.11
PSMD7-205ENST00000568615 CUX1P39880 1505 aa21.89■■□□□ 1.09
PSMD7-205ENST00000568615 WRNQ14191 1432 aaPredicted RBP eCLIP21.85■■□□□ 1.09
PSMD7-205ENST00000568615 POLA1P09884 1462 aaPredicted RBP21.82■■□□□ 1.08
PSMD7-205ENST00000568615 IFT140Q96RY7 1462 aa21.82■■□□□ 1.08
PSMD7-205ENST00000568615 FGD5Q6ZNL6 1462 aa21.78■■□□□ 1.08
PSMD7-205ENST00000568615 TRIM41Q8WV44 630 aa21.77■■□□□ 1.08
PSMD7-205ENST00000568615 SOGA1O94964 1423 aa21.76■■□□□ 1.07
PSMD7-205ENST00000568615 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
PSMD7-205ENST00000568615 SYNJ1O43426 1573 aa21.73■■□□□ 1.07
PSMD7-205ENST00000568615 RAD54L2Q9Y4B4 1467 aa21.71■■□□□ 1.07
PSMD7-205ENST00000568615 TARBP1Q13395 1621 aaKnown RBP21.69■■□□□ 1.06
PSMD7-205ENST00000568615 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
PSMD7-205ENST00000568615 ZNF608Q9ULD9 1512 aaPredicted RBP21.68■■□□□ 1.06
PSMD7-205ENST00000568615 ABCA10Q8WWZ4 1543 aa21.61■■□□□ 1.05
PSMD7-205ENST00000568615 TDRD9Q8NDG6 1382 aaKnown RBP21.61■■□□□ 1.05
PSMD7-205ENST00000568615 AQRO60306 1485 aaKnown RBP eCLIP21.6■■□□□ 1.054e-7■■■■□ 26
PSMD7-205ENST00000568615 OSCARQ8IYS5 282 aa21.57■■□□□ 1.04
PSMD7-205ENST00000568615 WDR97A6NE52 1622 aa21.55■■□□□ 1.04
PSMD7-205ENST00000568615 EIF4G3O43432 1585 aaKnown RBP21.54■■□□□ 1.04
PSMD7-205ENST00000568615 GAPVD1Q14C86 1478 aa21.49■■□□□ 1.03
PSMD7-205ENST00000568615 GRIN2BQ13224 1484 aa21.47■■□□□ 1.03
PSMD7-205ENST00000568615 ABCA5Q8WWZ7 1642 aa21.44■■□□□ 1.02
PSMD7-205ENST00000568615 RIMBP3CA6NJZ7 1639 aa21.4■■□□□ 1.02
PSMD7-205ENST00000568615 RIMBP3BA6NNM3 1639 aa21.4■■□□□ 1.02
PSMD7-205ENST00000568615 RIMBP3Q9UFD9 1639 aa21.4■■□□□ 1.02
PSMD7-205ENST00000568615 KIF27Q86VH2 1401 aa21.39■■□□□ 1.02
PSMD7-205ENST00000568615 SNAPC4Q5SXM2 1469 aa21.39■■□□□ 1.01
PSMD7-205ENST00000568615 MAGI1Q96QZ7 1491 aaPredicted RBP21.39■■□□□ 1.01
PSMD7-205ENST00000568615 CHIC1Q5VXU3 224 aa21.38■■□□□ 1.01
PSMD7-205ENST00000568615 ERICH3Q5RHP9 1530 aa21.34■■□□□ 1.01
PSMD7-205ENST00000568615 IGF1RP08069 1367 aa21.31■■□□□ 1
PSMD7-205ENST00000568615 FBLN2P98095 1184 aa21.3■■□□□ 1
PSMD7-205ENST00000568615 CHMP7Q8WUX9 453 aaPredicted RBP21.3■■□□□ 1
PSMD7-205ENST00000568615 SYNJ2O15056 1496 aa21.3■■□□□ 1
PSMD7-205ENST00000568615 ARHGEF11O15085 1522 aa21.29■■□□□ 1
PSMD7-205ENST00000568615 PBRM1Q86U86 1689 aa21.29■■□□□ 1
PSMD7-205ENST00000568615 FHAD1B1AJZ9 1412 aa21.27■■□□□ 1
PSMD7-205ENST00000568615 CHD1O14646 1710 aa21.26■□□□□ 0.99
PSMD7-205ENST00000568615 ADAMTS12P58397 1594 aa21.23■□□□□ 0.99
PSMD7-205ENST00000568615 RUSC2Q8N2Y8 1516 aa21.22■□□□□ 0.99
PSMD7-205ENST00000568615 GRIN2AQ12879 1464 aa21.18■□□□□ 0.98
PSMD7-205ENST00000568615 CARMIL1Q5VZK9 1371 aa21.17■□□□□ 0.98
PSMD7-205ENST00000568615 EEA1Q15075 1411 aa21.13■□□□□ 0.97
PSMD7-205ENST00000568615 CUL7Q14999 1698 aa21.12■□□□□ 0.97
PSMD7-205ENST00000568615 CYB5RLQ6IPT4 315 aa21.11■□□□□ 0.97
PSMD7-205ENST00000568615 NUP160Q12769 1436 aa21.11■□□□□ 0.97
PSMD7-205ENST00000568615 CSRNP3Q8WYN3 585 aa21.09■□□□□ 0.97
PSMD7-205ENST00000568615 ARAP1Q96P48 1450 aa21.07■□□□□ 0.96
PSMD7-205ENST00000568615 CLASP1Q7Z460 1538 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 1268.4 ms